RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 SS18Q15532 418 aa6.87□□□□□ -1.31
MBD3-203ENST00000585903 TOMM6Q96B49 74 aa6.87□□□□□ -1.31
MBD3-203ENST00000585903 SCGB3A1Q96QR1 104 aa6.87□□□□□ -1.31
MBD3-203ENST00000585903 HBDP02042 147 aa6.86□□□□□ -1.31
MBD3-203ENST00000585903 MRPS36P82909 103 aaKnown RBP6.86□□□□□ -1.31
MBD3-203ENST00000585903 CLPSL2Q6UWE3 100 aa6.86□□□□□ -1.31
MBD3-203ENST00000585903 ERASQ7Z444 233 aa6.86□□□□□ -1.31
MBD3-203ENST00000585903 C9orf163Q8N9P6 203 aa6.86□□□□□ -1.31
MBD3-203ENST00000585903 TMEM141Q96I45 108 aa6.86□□□□□ -1.31
MBD3-203ENST00000585903 C2orf88Q9BSF0 95 aa6.86□□□□□ -1.31
MBD3-203ENST00000585903 VCX2Q9H322 139 aa6.86□□□□□ -1.31
MBD3-203ENST00000585903 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
MBD3-203ENST00000585903 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
MBD3-203ENST00000585903 TEX43Q6ZNM6 134 aa6.85□□□□□ -1.31
MBD3-203ENST00000585903 TIMM17AQ99595 171 aa6.85□□□□□ -1.31
MBD3-203ENST00000585903 PLA2G2DQ9UNK4 145 aa6.85□□□□□ -1.31
MBD3-203ENST00000585903 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.84□□□□□ -1.31
MBD3-203ENST00000585903 HIST1H2BKO60814 126 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 ATP5LO75964 103 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 HIST1H2BJP06899 126 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 HIST1H2BOP23527 126 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 HIST1H2BBP33778 126 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 HIST1H2BDP58876 126 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 HIST1H2BCP62807 126 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 HIST2H2BEQ16778 126 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.84□□□□□ -1.31
MBD3-203ENST00000585903 Q6ZUT4 128 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 HIST1H2BHQ93079 126 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 HIST1H2BNQ99877 126 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 HIST1H2BMQ99879 126 aa6.84□□□□□ -1.31
MBD3-203ENST00000585903 IGLV10-54A0A075B6I4 117 aa6.83□□□□□ -1.32
MBD3-203ENST00000585903 IGLV4-3A0A075B6K6 122 aa6.83□□□□□ -1.32
MBD3-203ENST00000585903 TRAV13-1A0A0B4J241 112 aa6.83□□□□□ -1.32
MBD3-203ENST00000585903 LINC00959A0A1B0GUT2 108 aa6.83□□□□□ -1.32
MBD3-203ENST00000585903 IGIPA6NJ69 53 aa6.83□□□□□ -1.32
MBD3-203ENST00000585903 IFITM10A6NMD0 228 aa6.83□□□□□ -1.32
MBD3-203ENST00000585903 SERF1AO75920 110 aa6.83□□□□□ -1.32
MBD3-203ENST00000585903 RPL37AP61513 92 aaKnown RBP6.83□□□□□ -1.32
MBD3-203ENST00000585903 CNBPP62633 177 aaKnown RBP6.83□□□□□ -1.32
MBD3-203ENST00000585903 CIRBPQ14011 172 aaKnown RBP6.83□□□□□ -1.32
MBD3-203ENST00000585903 KRTAP26-1Q6PEX3 210 aa6.83□□□□□ -1.32
MBD3-203ENST00000585903 URB1-AS1Q96HZ7 61 aa6.83□□□□□ -1.32
MBD3-203ENST00000585903 PRSS1P07477 247 aa6.82□□□□□ -1.32
MBD3-203ENST00000585903 SEC11AP67812 179 aa6.82□□□□□ -1.32
MBD3-203ENST00000585903 RNASE13Q5GAN3 156 aaKnown RBP6.82□□□□□ -1.32
MBD3-203ENST00000585903 CHCHD10Q8WYQ3 142 aaPredicted RBP6.82□□□□□ -1.32
MBD3-203ENST00000585903 OPRPNQ99935 248 aaPredicted RBP6.82□□□□□ -1.32
MBD3-203ENST00000585903 XCL1P47992 114 aa6.81□□□□□ -1.32
MBD3-203ENST00000585903 NDUFA6P56556 154 aa6.81□□□□□ -1.32
MBD3-203ENST00000585903 PMCHL1Q16048 86 aa6.81□□□□□ -1.32
MBD3-203ENST00000585903 CFAP161Q6P656 301 aa6.81□□□□□ -1.32
MBD3-203ENST00000585903 SDIM1Q6ZPB5 146 aa6.81□□□□□ -1.32
MBD3-203ENST00000585903 HSPB8Q9UJY1 196 aa6.81□□□□□ -1.32
MBD3-203ENST00000585903 GAGE12HA6NDE8 117 aa6.8□□□□□ -1.32
MBD3-203ENST00000585903 LEPROTL1O95214 131 aa6.8□□□□□ -1.32
MBD3-203ENST00000585903 S100A6P06703 90 aa6.8□□□□□ -1.32
MBD3-203ENST00000585903 PMVKQ15126 192 aa6.8□□□□□ -1.32
MBD3-203ENST00000585903 PDZD11Q5EBL8 140 aa6.8□□□□□ -1.32
MBD3-203ENST00000585903 CD164L2Q6UWJ8 174 aa6.8□□□□□ -1.32
MBD3-203ENST00000585903 Q6ZRU5 148 aa6.8□□□□□ -1.32
MBD3-203ENST00000585903 FAM19A2Q8N3H0 131 aa6.8□□□□□ -1.32
MBD3-203ENST00000585903 AMELXQ99217 191 aa6.8□□□□□ -1.32
MBD3-203ENST00000585903 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.79□□□□□ -1.32
MBD3-203ENST00000585903 MALP21145 153 aa6.79□□□□□ -1.32
MBD3-203ENST00000585903 IFI27L1Q96BM0 104 aa6.79□□□□□ -1.32
MBD3-203ENST00000585903 GEMIN7Q9H840 131 aaKnown RBP6.79□□□□□ -1.32
MBD3-203ENST00000585903 PKHD1L1Q86WI1 4243 aa6.78□□□□□ -1.32
MBD3-203ENST00000585903 A0A096LNJ9 63 aa6.78□□□□□ -1.32
MBD3-203ENST00000585903 COX7A2LO14548 114 aa6.78□□□□□ -1.32
MBD3-203ENST00000585903 APOMO95445 188 aa6.78□□□□□ -1.32
MBD3-203ENST00000585903 UBE2D1P51668 147 aa6.78□□□□□ -1.32
MBD3-203ENST00000585903 COA6Q5JTJ3 125 aaKnown RBP6.78□□□□□ -1.32
MBD3-203ENST00000585903 CST9LQ9H4G1 147 aa6.78□□□□□ -1.32
MBD3-203ENST00000585903 IGHV3-64A0A075B6Q5 118 aa6.77□□□□□ -1.33
MBD3-203ENST00000585903 HERVK_113P63121 156 aa6.77□□□□□ -1.33
MBD3-203ENST00000585903 FOXI1Q12951 378 aa6.77□□□□□ -1.33
MBD3-203ENST00000585903 FAM104AQ969W3 186 aa6.77□□□□□ -1.33
MBD3-203ENST00000585903 PACRGQ96M98 296 aaPredicted RBP6.77□□□□□ -1.33
MBD3-203ENST00000585903 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.77□□□□□ -1.33
MBD3-203ENST00000585903 IGHV1-58A0A0C4DH39 117 aa6.76□□□□□ -1.33
MBD3-203ENST00000585903 NUPR1O60356 82 aa6.76□□□□□ -1.33
MBD3-203ENST00000585903 FABP4P15090 132 aa6.76□□□□□ -1.33
MBD3-203ENST00000585903 LINC00310P59036 64 aa6.76□□□□□ -1.33
MBD3-203ENST00000585903 LINC00242Q5T6M2 205 aa6.76□□□□□ -1.33
MBD3-203ENST00000585903 ZC2HC1BQ5TFG8 222 aa6.76□□□□□ -1.33
MBD3-203ENST00000585903 LINC00173Q6ZV60 143 aa6.76□□□□□ -1.33
MBD3-203ENST00000585903 MAP1LC3CQ9BXW4 147 aa6.76□□□□□ -1.33
MBD3-203ENST00000585903 LRP2P98164 4655 aa6.75□□□□□ -1.33
MBD3-203ENST00000585903 TRAV12-1A0A0B4J245 112 aa6.75□□□□□ -1.33
MBD3-203ENST00000585903 TINCRA0A1B0GVN0 87 aa6.75□□□□□ -1.33
MBD3-203ENST00000585903 hDV102S1A0JD36 115 aa6.75□□□□□ -1.33
MBD3-203ENST00000585903 S100A2P29034 98 aa6.75□□□□□ -1.33
MBD3-203ENST00000585903 FAM19A3Q7Z5A8 133 aa6.75□□□□□ -1.33
MBD3-203ENST00000585903 C5orf38Q86SI9 138 aa6.75□□□□□ -1.33
MBD3-203ENST00000585903 IGHV3OR16-9A0A0B4J2B5 98 aa6.74□□□□□ -1.33
MBD3-203ENST00000585903 A0A0J9YXV3 536 aa6.74□□□□□ -1.33
MBD3-203ENST00000585903 H3BRM9 83 aa6.74□□□□□ -1.33
MBD3-203ENST00000585903 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
MBD3-203ENST00000585903 HNRNPA3P51991 378 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms