RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 HIGD2BQ4VC39 106 aa10.98□□□□□ -0.65
GFAP-205ENST00000585543 PDZD11Q5EBL8 140 aa10.98□□□□□ -0.65
GFAP-205ENST00000585543 LINC00242Q5T6M2 205 aa10.98□□□□□ -0.65
GFAP-205ENST00000585543 ZC2HC1BQ5TFG8 222 aa10.98□□□□□ -0.65
GFAP-205ENST00000585543 C15orf56Q8N910 161 aa10.98□□□□□ -0.65
GFAP-205ENST00000585543 GVQW2A0A096LPI5 108 aaPredicted RBP10.97□□□□□ -0.65
GFAP-205ENST00000585543 FUSP35637 526 aaKnown RBP eCLIP10.97□□□□□ -0.65
GFAP-205ENST00000585543 HECTD4Q9Y4D8 3996 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 IGHV3OR16-9A0A0B4J2B5 98 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 HIST1H2BKO60814 126 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 HIST1H2BJP06899 126 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 HIST1H2BOP23527 126 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 HIST1H2BBP33778 126 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 HIST1H2BDP58876 126 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 HIST1H2BCP62807 126 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 HIST2H2BEQ16778 126 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.96□□□□□ -0.65
GFAP-205ENST00000585543 HIST1H2BHQ93079 126 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 HIST1H2BNQ99877 126 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 HIST1H2BMQ99879 126 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 CST9LQ9H4G1 147 aa10.96□□□□□ -0.65
GFAP-205ENST00000585543 FAM19A3Q7Z5A8 133 aa10.95□□□□□ -0.66
GFAP-205ENST00000585543 OR10D4PQ8NGN7 298 aa10.95□□□□□ -0.66
GFAP-205ENST00000585543 PACRGQ96M98 296 aaPredicted RBP10.95□□□□□ -0.66
GFAP-205ENST00000585543 EPPK1P58107 5090 aaKnown RBP10.95□□□□□ -0.66
GFAP-205ENST00000585543 A0A087WZ39 114 aa10.94□□□□□ -0.66
GFAP-205ENST00000585543 LEPROTL1O95214 131 aa10.94□□□□□ -0.66
GFAP-205ENST00000585543 CNBPP62633 177 aaKnown RBP10.94□□□□□ -0.66
GFAP-205ENST00000585543 FAM19A2Q8N3H0 131 aa10.94□□□□□ -0.66
GFAP-205ENST00000585543 ORAOV1Q8WV07 137 aa10.94□□□□□ -0.66
GFAP-205ENST00000585543 IFI27L1Q96BM0 104 aa10.94□□□□□ -0.66
GFAP-205ENST00000585543 A0A0J9YXV3 536 aa10.93□□□□□ -0.66
GFAP-205ENST00000585543 TINCRA0A1B0GVN0 87 aa10.93□□□□□ -0.66
GFAP-205ENST00000585543 SPAG11BQ08648 103 aa10.93□□□□□ -0.66
GFAP-205ENST00000585543 LINC01561Q8N1V8 128 aa10.93□□□□□ -0.66
GFAP-205ENST00000585543 LINC00469Q8N7U9 141 aa10.93□□□□□ -0.66
GFAP-205ENST00000585543 HSPB8Q9UJY1 196 aa10.93□□□□□ -0.66
GFAP-205ENST00000585543 PKIGQ9Y2B9 76 aa10.93□□□□□ -0.66
GFAP-205ENST00000585543 IGHV3-64A0A075B6Q5 118 aa10.92□□□□□ -0.66
GFAP-205ENST00000585543 COX6A2Q02221 97 aa10.92□□□□□ -0.66
GFAP-205ENST00000585543 PKD1P98161 4303 aa10.92□□□□□ -0.66
GFAP-205ENST00000585543 H3BRM9 83 aa10.91□□□□□ -0.66
GFAP-205ENST00000585543 PRSS2P07478 247 aa10.9□□□□□ -0.66
GFAP-205ENST00000585543 LINC00310P59036 64 aa10.9□□□□□ -0.66
GFAP-205ENST00000585543 C9orf163Q8N9P6 203 aa10.9□□□□□ -0.66
GFAP-205ENST00000585543 CARD19Q96LW7 228 aa10.9□□□□□ -0.66
GFAP-205ENST00000585543 CAMK2N2Q96S95 79 aa10.9□□□□□ -0.66
GFAP-205ENST00000585543 CHAC1Q9BUX1 264 aa10.9□□□□□ -0.66
GFAP-205ENST00000585543 IGLV4-69A0A075B6H9 119 aa10.89□□□□□ -0.67
GFAP-205ENST00000585543 F8WDY8 70 aa10.89□□□□□ -0.67
GFAP-205ENST00000585543 SYCNQ0VAF6 134 aa10.89□□□□□ -0.67
GFAP-205ENST00000585543 C2orf48Q96LS8 159 aa10.89□□□□□ -0.67
GFAP-205ENST00000585543 CDKN2A-AS1Q9UH64 79 aa10.89□□□□□ -0.67
GFAP-205ENST00000585543 CHTOPQ9Y3Y2 248 aaKnown RBP10.89□□□□□ -0.67
GFAP-205ENST00000585543 TRAV12-1A0A0B4J245 112 aa10.88□□□□□ -0.67
GFAP-205ENST00000585543 IGLC3P0DOY3 106 aa10.88□□□□□ -0.67
GFAP-205ENST00000585543 FABP4P15090 132 aa10.88□□□□□ -0.67
GFAP-205ENST00000585543 KRTAP10-1P60331 282 aa10.88□□□□□ -0.67
GFAP-205ENST00000585543 LINC00526Q96FQ7 95 aa10.88□□□□□ -0.67
GFAP-205ENST00000585543 H0Y8G0 127 aa10.87□□□□□ -0.67
GFAP-205ENST00000585543 NDUFA1O15239 70 aa10.87□□□□□ -0.67
GFAP-205ENST00000585543 LINC01620Q4KN68 170 aa10.87□□□□□ -0.67
GFAP-205ENST00000585543 TOMM7Q9P0U1 55 aa10.87□□□□□ -0.67
GFAP-205ENST00000585543 IGLV5-45A0A087WSX0 123 aa10.86□□□□□ -0.67
GFAP-205ENST00000585543 NUPR1O60356 82 aa10.86□□□□□ -0.67
GFAP-205ENST00000585543 CDK2AP2O75956 126 aa10.86□□□□□ -0.67
GFAP-205ENST00000585543 MAP1LC3CQ9BXW4 147 aa10.86□□□□□ -0.67
GFAP-205ENST00000585543 DNAH11Q96DT5 4516 aa10.86□□□□□ -0.67
GFAP-205ENST00000585543 BIRC6Q9NR09 4857 aa10.86□□□□□ -0.67
GFAP-205ENST00000585543 F8VRH5 84 aa10.84□□□□□ -0.67
GFAP-205ENST00000585543 SLPIP03973 132 aa10.84□□□□□ -0.67
GFAP-205ENST00000585543 CKS1BP61024 79 aa10.84□□□□□ -0.67
GFAP-205ENST00000585543 C6orf226Q5I0X4 101 aa10.84□□□□□ -0.67
GFAP-205ENST00000585543 COA6Q5JTJ3 125 aaKnown RBP10.84□□□□□ -0.67
GFAP-205ENST00000585543 TMEM170BQ5T4T1 132 aa10.84□□□□□ -0.67
GFAP-205ENST00000585543 Q8IZM0 81 aa10.84□□□□□ -0.67
GFAP-205ENST00000585543 PKHD1P08F94 4074 aa10.83□□□□□ -0.68
GFAP-205ENST00000585543 Q6ZRU5 148 aa10.83□□□□□ -0.68
GFAP-205ENST00000585543 SMIM1B2RUZ4 78 aa10.82□□□□□ -0.68
GFAP-205ENST00000585543 S100A6P06703 90 aa10.82□□□□□ -0.68
GFAP-205ENST00000585543 SPINK8P0C7L1 97 aa10.82□□□□□ -0.68
GFAP-205ENST00000585543 ZNF22P17026 224 aaPredicted RBP10.82□□□□□ -0.68
GFAP-205ENST00000585543 CXCL5P42830 114 aa10.82□□□□□ -0.68
GFAP-205ENST00000585543 C11orf86A6NJI1 115 aa10.81□□□□□ -0.68
GFAP-205ENST00000585543 MRPL35Q9NZE8 188 aaKnown RBP10.81□□□□□ -0.68
GFAP-205ENST00000585543 LOC107984640A0A0U1RRK4 108 aa10.8□□□□□ -0.68
GFAP-205ENST00000585543 PLNP26678 52 aa10.8□□□□□ -0.68
GFAP-205ENST00000585543 RNF151Q2KHN1 245 aa10.8□□□□□ -0.68
GFAP-205ENST00000585543 SDIM1Q6ZPB5 146 aa10.8□□□□□ -0.68
GFAP-205ENST00000585543 COX7B2Q8TF08 81 aa10.8□□□□□ -0.68
GFAP-205ENST00000585543 DPH3Q96FX2 82 aa10.8□□□□□ -0.68
GFAP-205ENST00000585543 TRBV30A0A0K0K1B3 111 aa10.79□□□□□ -0.68
GFAP-205ENST00000585543 KIAA0087Q14695 138 aa10.79□□□□□ -0.68
GFAP-205ENST00000585543 ODF1Q14990 250 aa10.79□□□□□ -0.68
GFAP-205ENST00000585543 Q6ZSA8 131 aa10.79□□□□□ -0.68
GFAP-205ENST00000585543 LINC00474Q9P2X8 69 aa10.79□□□□□ -0.68
GFAP-205ENST00000585543 DNAH5Q8TE73 4624 aa10.78□□□□□ -0.68
GFAP-205ENST00000585543 UNQ6190/PRO20217Q6UXQ8 127 aa10.78□□□□□ -0.68
GFAP-205ENST00000585543 DYNC1H1Q14204 4646 aaKnown RBP10.78□□□□□ -0.68
GFAP-205ENST00000585543 DPM2O94777 84 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms