RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 IGHV3OR16-9A0A0B4J2B5 98 aa10.81□□□□□ -0.68
SS18-226ENST00000585241 LY6G6CO95867 125 aa10.81□□□□□ -0.68
SS18-226ENST00000585241 COX6A2Q02221 97 aa10.81□□□□□ -0.68
SS18-226ENST00000585241 CD164L2Q6UWJ8 174 aa10.81□□□□□ -0.68
SS18-226ENST00000585241 SCGB1D1O95968 90 aa10.8□□□□□ -0.68
SS18-226ENST00000585241 ZNF22P17026 224 aaPredicted RBP10.8□□□□□ -0.68
SS18-226ENST00000585241 Q6ZR54 194 aa10.8□□□□□ -0.68
SS18-226ENST00000585241 GEMIN7Q9H840 131 aaKnown RBP10.8□□□□□ -0.68
SS18-226ENST00000585241 IGLV10-54A0A075B6I4 117 aa10.78□□□□□ -0.68
SS18-226ENST00000585241 XCL1P47992 114 aa10.78□□□□□ -0.68
SS18-226ENST00000585241 FOXI1Q12951 378 aa10.78□□□□□ -0.68
SS18-226ENST00000585241 LINC01561Q8N1V8 128 aa10.78□□□□□ -0.68
SS18-226ENST00000585241 RMI2Q96E14 147 aa10.78□□□□□ -0.68
SS18-226ENST00000585241 C1orf43Q9BWL3 253 aa10.78□□□□□ -0.68
SS18-226ENST00000585241 CDKN2A-AS1Q9UH64 79 aa10.78□□□□□ -0.68
SS18-226ENST00000585241 LINC00469Q8N7U9 141 aa10.77□□□□□ -0.69
SS18-226ENST00000585241 Q9HAA7 133 aa10.77□□□□□ -0.69
SS18-226ENST00000585241 A0A087WZ39 114 aa10.76□□□□□ -0.69
SS18-226ENST00000585241 GAGE12HA6NDE8 117 aa10.76□□□□□ -0.69
SS18-226ENST00000585241 SMIM6P0DI80 62 aa10.76□□□□□ -0.69
SS18-226ENST00000585241 COX11Q9Y6N1 276 aa10.76□□□□□ -0.69
SS18-226ENST00000585241 IGKV2D-24A0A075B6R9 120 aa10.75□□□□□ -0.69
SS18-226ENST00000585241 LCE6AA0A183 80 aa10.75□□□□□ -0.69
SS18-226ENST00000585241 TMEM223A0PJW6 202 aa10.75□□□□□ -0.69
SS18-226ENST00000585241 H3BRM9 83 aa10.75□□□□□ -0.69
SS18-226ENST00000585241 TMEM170BQ5T4T1 132 aa10.75□□□□□ -0.69
SS18-226ENST00000585241 ATOH7Q8N100 152 aa10.75□□□□□ -0.69
SS18-226ENST00000585241 KMT2AQ03164 3969 aa10.75□□□□□ -0.69
SS18-226ENST00000585241 COX7A2LO14548 114 aa10.74□□□□□ -0.69
SS18-226ENST00000585241 TM2D2Q9BX73 214 aa10.74□□□□□ -0.69
SS18-226ENST00000585241 SACSQ9NZJ4 4579 aa10.74□□□□□ -0.69
SS18-226ENST00000585241 SMIM1B2RUZ4 78 aa10.73□□□□□ -0.69
SS18-226ENST00000585241 CDPF1Q6NVV7 123 aa10.73□□□□□ -0.69
SS18-226ENST00000585241 Q6ZRN7 208 aaPredicted RBP10.73□□□□□ -0.69
SS18-226ENST00000585241 IGLV5-39A0A0G2JS06 123 aa10.72□□□□□ -0.69
SS18-226ENST00000585241 C5orf38Q86SI9 138 aa10.72□□□□□ -0.69
SS18-226ENST00000585241 hDV102S1A0JD36 115 aa10.71□□□□□ -0.69
SS18-226ENST00000585241 M0R2N4 97 aa10.71□□□□□ -0.69
SS18-226ENST00000585241 HERVK_113P61574 105 aa10.71□□□□□ -0.69
SS18-226ENST00000585241 STPG4Q8N801 248 aa10.71□□□□□ -0.69
SS18-226ENST00000585241 IGHV1-58A0A0C4DH39 117 aa10.7□□□□□ -0.7
SS18-226ENST00000585241 E9PLD3 99 aa10.7□□□□□ -0.7
SS18-226ENST00000585241 SPINK8P0C7L1 97 aa10.7□□□□□ -0.7
SS18-226ENST00000585241 MAJINQ3KP22 176 aa10.7□□□□□ -0.7
SS18-226ENST00000585241 ANKRD39Q53RE8 183 aa10.7□□□□□ -0.7
SS18-226ENST00000585241 C6orf223Q8N319 242 aa10.7□□□□□ -0.7
SS18-226ENST00000585241 MAPKAPK5-AS1Q8N8E1 139 aa10.7□□□□□ -0.7
SS18-226ENST00000585241 IGHV3-64A0A075B6Q5 118 aa10.69□□□□□ -0.7
SS18-226ENST00000585241 HSBP1L1C9JCN9 74 aa10.69□□□□□ -0.7
SS18-226ENST00000585241 APOMO95445 188 aa10.68□□□□□ -0.7
SS18-226ENST00000585241 MALP21145 153 aa10.68□□□□□ -0.7
SS18-226ENST00000585241 VAMP8Q9BV40 100 aa10.68□□□□□ -0.7
SS18-226ENST00000585241 LEPROTO15243 131 aa10.67□□□□□ -0.7
SS18-226ENST00000585241 C15orf56Q8N910 161 aa10.67□□□□□ -0.7
SS18-226ENST00000585241 IGKV2D-26A0A0A0MRZ7 120 aa10.66□□□□□ -0.7
SS18-226ENST00000585241 C1orf134Q5TEV5 83 aa10.66□□□□□ -0.7
SS18-226ENST00000585241 PLEKHB2Q96CS7 222 aa10.66□□□□□ -0.7
SS18-226ENST00000585241 KIAA0087Q14695 138 aa10.65□□□□□ -0.7
SS18-226ENST00000585241 CFAP161Q6P656 301 aa10.65□□□□□ -0.7
SS18-226ENST00000585241 Q8IZM0 81 aa10.65□□□□□ -0.7
SS18-226ENST00000585241 LINC00518Q8N0U6 118 aa10.65□□□□□ -0.7
SS18-226ENST00000585241 ORAOV1Q8WV07 137 aa10.65□□□□□ -0.7
SS18-226ENST00000585241 PAM16Q9Y3D7 125 aa10.65□□□□□ -0.7
SS18-226ENST00000585241 DNAH10Q8IVF4 4471 aa10.65□□□□□ -0.7
SS18-226ENST00000585241 HYDINQ4G0P3 5121 aa10.65□□□□□ -0.71
SS18-226ENST00000585241 GVQW2A0A096LPI5 108 aaPredicted RBP10.64□□□□□ -0.71
SS18-226ENST00000585241 PSCAO43653 123 aa10.64□□□□□ -0.71
SS18-226ENST00000585241 TSPEAR-AS2P59090 65 aa10.64□□□□□ -0.71
SS18-226ENST00000585241 S100A12P80511 92 aa10.64□□□□□ -0.71
SS18-226ENST00000585241 SPATA45Q537H7 98 aa10.64□□□□□ -0.71
SS18-226ENST00000585241 COX7B2Q8TF08 81 aa10.64□□□□□ -0.71
SS18-226ENST00000585241 LRCOL1A6NCL2 159 aa10.63□□□□□ -0.71
SS18-226ENST00000585241 USP17L23D6RBM5 183 aa10.63□□□□□ -0.71
SS18-226ENST00000585241 J3QQQ9 107 aa10.63□□□□□ -0.71
SS18-226ENST00000585241 C12orf57Q99622 126 aa10.63□□□□□ -0.71
SS18-226ENST00000585241 DNAH2Q9P225 4427 aa10.63□□□□□ -0.71
SS18-226ENST00000585241 RYR2Q92736 4967 aa10.62□□□□□ -0.71
SS18-226ENST00000585241 SPAG11BQ08648 103 aa10.62□□□□□ -0.71
SS18-226ENST00000585241 CXCL5P42830 114 aa10.61□□□□□ -0.71
SS18-226ENST00000585241 WFDC2Q14508 124 aa10.61□□□□□ -0.71
SS18-226ENST00000585241 KMT2CQ8NEZ4 4911 aaKnown RBP10.61□□□□□ -0.71
SS18-226ENST00000585241 F8WDY8 70 aa10.6□□□□□ -0.71
SS18-226ENST00000585241 PRSS2P07478 247 aa10.6□□□□□ -0.71
SS18-226ENST00000585241 LGALS3P17931 250 aaKnown RBP10.6□□□□□ -0.71
SS18-226ENST00000585241 NMUP48645 174 aa10.6□□□□□ -0.71
SS18-226ENST00000585241 NTN5Q8WTR8 489 aaPredicted RBP10.6□□□□□ -0.71
SS18-226ENST00000585241 ZNF625Q96I27 306 aaPredicted RBP10.6□□□□□ -0.71
SS18-226ENST00000585241 C2orf48Q96LS8 159 aa10.6□□□□□ -0.71
SS18-226ENST00000585241 TOMM7Q9P0U1 55 aa10.6□□□□□ -0.71
SS18-226ENST00000585241 DNAH17Q9UFH2 4485 aa10.59□□□□□ -0.71
SS18-226ENST00000585241 RTL8CO15255 209 aa10.59□□□□□ -0.71
SS18-226ENST00000585241 COX8AP10176 69 aa10.59□□□□□ -0.71
SS18-226ENST00000585241 HIGD2BQ4VC39 106 aa10.59□□□□□ -0.71
SS18-226ENST00000585241 C14orf177Q52M58 125 aa10.59□□□□□ -0.71
SS18-226ENST00000585241 SFTA2Q6UW10 78 aa10.59□□□□□ -0.71
SS18-226ENST00000585241 NDUFA1O15239 70 aa10.58□□□□□ -0.72
SS18-226ENST00000585241 C6orf226Q5I0X4 101 aa10.58□□□□□ -0.72
SS18-226ENST00000585241 PCP2Q8IVA1 136 aa10.58□□□□□ -0.72
SS18-226ENST00000585241 TTTY13Q9BZ97 58 aa10.58□□□□□ -0.72
SS18-226ENST00000585241 NDUFA12Q9UI09 145 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms