RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 LAMTOR2Q9Y2Q5 125 aa9.38□□□□□ -0.91
VAPA-209ENST00000585042 CCL25O15444 150 aa9.37□□□□□ -0.91
VAPA-209ENST00000585042 XCL1P47992 114 aa9.37□□□□□ -0.91
VAPA-209ENST00000585042 RHEBQ15382 184 aa9.37□□□□□ -0.91
VAPA-209ENST00000585042 C10orf91Q5T1B1 145 aa9.37□□□□□ -0.91
VAPA-209ENST00000585042 REG3GQ6UW15 175 aa9.37□□□□□ -0.91
VAPA-209ENST00000585042 CD164L2Q6UWJ8 174 aa9.37□□□□□ -0.91
VAPA-209ENST00000585042 PRELID3AQ96N28 172 aa9.37□□□□□ -0.91
VAPA-209ENST00000585042 CARHSP1Q9Y2V2 147 aaKnown RBP9.37□□□□□ -0.91
VAPA-209ENST00000585042 A0A0J9YXV3 536 aa9.36□□□□□ -0.91
VAPA-209ENST00000585042 RAB5AP20339 215 aa9.36□□□□□ -0.91
VAPA-209ENST00000585042 S100A1P23297 94 aa9.36□□□□□ -0.91
VAPA-209ENST00000585042 KRTAP10-8P60410 259 aa9.36□□□□□ -0.91
VAPA-209ENST00000585042 CARD19Q96LW7 228 aa9.36□□□□□ -0.91
VAPA-209ENST00000585042 SMIM2Q9BVW6 85 aa9.36□□□□□ -0.91
VAPA-209ENST00000585042 CDC42SE2Q9NRR3 84 aa9.36□□□□□ -0.91
VAPA-209ENST00000585042 ZNF561-AS1K7EIQ3 104 aa9.35□□□□□ -0.91
VAPA-209ENST00000585042 NPYP01303 97 aa9.35□□□□□ -0.91
VAPA-209ENST00000585042 SYCNQ0VAF6 134 aa9.35□□□□□ -0.91
VAPA-209ENST00000585042 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.91
VAPA-209ENST00000585042 Q6ZRP5 223 aa9.35□□□□□ -0.91
VAPA-209ENST00000585042 ZNF664Q8N3J9 261 aa9.35□□□□□ -0.91
VAPA-209ENST00000585042 RPS10P5Q9NQ39 176 aa9.35□□□□□ -0.91
VAPA-209ENST00000585042 COX19Q49B96 90 aa9.34□□□□□ -0.91
VAPA-209ENST00000585042 MAP1LC3AQ9H492 121 aa9.34□□□□□ -0.91
VAPA-209ENST00000585042 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
VAPA-209ENST00000585042 C1orf196B1AJZ1 125 aa9.33□□□□□ -0.92
VAPA-209ENST00000585042 ATP6V1G1O75348 118 aa9.32□□□□□ -0.92
VAPA-209ENST00000585042 SNAPINO95295 136 aa9.32□□□□□ -0.92
VAPA-209ENST00000585042 APOC3P02656 99 aa9.32□□□□□ -0.92
VAPA-209ENST00000585042 SVBPQ8N300 66 aa9.32□□□□□ -0.92
VAPA-209ENST00000585042 LOC107984640A0A0U1RRK4 108 aa9.31□□□□□ -0.92
VAPA-209ENST00000585042 PRSS47A8MTI9 375 aa9.31□□□□□ -0.92
VAPA-209ENST00000585042 PTTG1IPP53801 180 aa9.31□□□□□ -0.92
VAPA-209ENST00000585042 LINC00526Q96FQ7 95 aa9.31□□□□□ -0.92
VAPA-209ENST00000585042 TIMM21Q9BVV7 248 aa9.31□□□□□ -0.92
VAPA-209ENST00000585042 TNXBP22105 4242 aa9.3□□□□□ -0.92
VAPA-209ENST00000585042 IGLV4-69A0A075B6H9 119 aa9.3□□□□□ -0.92
VAPA-209ENST00000585042 LOC389332A0A1B0GUA5 103 aa9.3□□□□□ -0.92
VAPA-209ENST00000585042 GNB1LQ9BYB4 327 aa9.3□□□□□ -0.92
VAPA-209ENST00000585042 UBE2D4Q9Y2X8 147 aa9.3□□□□□ -0.92
VAPA-209ENST00000585042 K7EMI3 77 aa9.29□□□□□ -0.92
VAPA-209ENST00000585042 COX7A2LO14548 114 aa9.29□□□□□ -0.92
VAPA-209ENST00000585042 MT-ND6P03923 174 aa9.29□□□□□ -0.92
VAPA-209ENST00000585042 MALP21145 153 aa9.29□□□□□ -0.92
VAPA-209ENST00000585042 G0S2P27469 103 aa9.29□□□□□ -0.92
VAPA-209ENST00000585042 Q8N8P6 123 aa9.29□□□□□ -0.92
VAPA-209ENST00000585042 C2orf48Q96LS8 159 aa9.29□□□□□ -0.92
VAPA-209ENST00000585042 SPANXA1Q9NS26 97 aa9.29□□□□□ -0.92
VAPA-209ENST00000585042 NXT2Q9NPJ8 142 aaKnown RBP9.28□□□□□ -0.92
VAPA-209ENST00000585042 APOMO95445 188 aa9.27□□□□□ -0.93
VAPA-209ENST00000585042 RNF151Q2KHN1 245 aa9.27□□□□□ -0.93
VAPA-209ENST00000585042 ORMDL2Q53FV1 153 aa9.27□□□□□ -0.93
VAPA-209ENST00000585042 IFI27P40305 119 aaPredicted RBP9.26□□□□□ -0.93
VAPA-209ENST00000585042 RPL39P62891 51 aaKnown RBP9.26□□□□□ -0.93
VAPA-209ENST00000585042 GAGE2BQ13066 116 aa9.26□□□□□ -0.93
VAPA-209ENST00000585042 CAMK2N2Q96S95 79 aa9.26□□□□□ -0.93
VAPA-209ENST00000585042 LRP2P98164 4655 aa9.26□□□□□ -0.93
VAPA-209ENST00000585042 F8WDY8 70 aa9.25□□□□□ -0.93
VAPA-209ENST00000585042 MRPS36P82909 103 aaKnown RBP9.25□□□□□ -0.93
VAPA-209ENST00000585042 FABP9Q0Z7S8 132 aa9.25□□□□□ -0.93
VAPA-209ENST00000585042 KIAA1644Q3SXP7 199 aa9.25□□□□□ -0.93
VAPA-209ENST00000585042 TRAV13-1A0A0B4J241 112 aa9.24□□□□□ -0.93
VAPA-209ENST00000585042 A0A1W2PNN7 141 aa9.24□□□□□ -0.93
VAPA-209ENST00000585042 CYSLTR1Q9Y271 337 aa9.24□□□□□ -0.93
VAPA-209ENST00000585042 PYGO1Q9Y3Y4 419 aa9.24□□□□□ -0.93
VAPA-209ENST00000585042 Q6ZUT4 128 aa9.23□□□□□ -0.93
VAPA-209ENST00000585042 OR10D4PQ8NGN7 298 aa9.23□□□□□ -0.93
VAPA-209ENST00000585042 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.22□□□□□ -0.93
VAPA-209ENST00000585042 C9orf116Q5BN46 136 aaPredicted RBP9.22□□□□□ -0.93
VAPA-209ENST00000585042 RNASE13Q5GAN3 156 aaKnown RBP9.22□□□□□ -0.93
VAPA-209ENST00000585042 Q6ZN92 141 aa9.22□□□□□ -0.93
VAPA-209ENST00000585042 ALKBH7Q9BT30 221 aaPredicted RBP9.22□□□□□ -0.93
VAPA-209ENST00000585042 PSORS1C2Q9UIG4 136 aa9.22□□□□□ -0.93
VAPA-209ENST00000585042 TGIF2-C20orf24A0A0A6YYL0 155 aa9.21□□□□□ -0.94
VAPA-209ENST00000585042 IFITM10A6NMD0 228 aa9.21□□□□□ -0.94
VAPA-209ENST00000585042 ODF1Q14990 250 aa9.21□□□□□ -0.94
VAPA-209ENST00000585042 PAPPA-AS1Q5QFB9 102 aa9.21□□□□□ -0.94
VAPA-209ENST00000585042 C2orf66Q6UXQ4 117 aa9.21□□□□□ -0.94
VAPA-209ENST00000585042 C5orf38Q86SI9 138 aa9.21□□□□□ -0.94
VAPA-209ENST00000585042 TRAPPC1Q9Y5R8 145 aa9.21□□□□□ -0.94
VAPA-209ENST00000585042 LINC01549A6NIU2 74 aa9.2□□□□□ -0.94
VAPA-209ENST00000585042 NPSP0C0P6 89 aa9.2□□□□□ -0.94
VAPA-209ENST00000585042 TEX43Q6ZNM6 134 aa9.2□□□□□ -0.94
VAPA-209ENST00000585042 TMEM141Q96I45 108 aa9.2□□□□□ -0.94
VAPA-209ENST00000585042 C2orf88Q9BSF0 95 aa9.2□□□□□ -0.94
VAPA-209ENST00000585042 SMCO4Q9NRQ5 59 aa9.2□□□□□ -0.94
VAPA-209ENST00000585042 MRPL35Q9NZE8 188 aaKnown RBP9.2□□□□□ -0.94
VAPA-209ENST00000585042 RPL18AQ02543 176 aaKnown RBP9.19□□□□□ -0.94
VAPA-209ENST00000585042 SPAG11BQ08648 103 aa9.19□□□□□ -0.94
VAPA-209ENST00000585042 FA2HQ7L5A8 372 aa9.19□□□□□ -0.94
VAPA-209ENST00000585042 OPRPNQ99935 248 aaPredicted RBP9.19□□□□□ -0.94
VAPA-209ENST00000585042 VCX2Q9H322 139 aa9.19□□□□□ -0.94
VAPA-209ENST00000585042 IGLV4-3A0A075B6K6 122 aa9.18□□□□□ -0.94
VAPA-209ENST00000585042 IGHV3OR16-9A0A0B4J2B5 98 aa9.18□□□□□ -0.94
VAPA-209ENST00000585042 RNF213Q63HN8 5207 aa9.18□□□□□ -0.94
VAPA-209ENST00000585042 TLX1NBP0CAT3 122 aa9.17□□□□□ -0.94
VAPA-209ENST00000585042 C1orf137Q5JT78 98 aa9.17□□□□□ -0.94
VAPA-209ENST00000585042 DIRC1Q969H9 104 aa9.17□□□□□ -0.94
VAPA-209ENST00000585042 NDUFA1O15239 70 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms