RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 PMVKQ15126 192 aa9.15□□□□□ -0.94
TRAF4-215ENST00000584944 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.14□□□□□ -0.95
TRAF4-215ENST00000584944 IGHV1-58A0A0C4DH39 117 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 ZNF561-AS1K7EIQ3 104 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 HIST1H2BKO60814 126 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 HIST1H2BJP06899 126 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 HIST1H2BOP23527 126 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 HIST1H2BBP33778 126 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 HIST1H2BDP58876 126 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 HIST1H2BCP62807 126 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 HIST2H2BEQ16778 126 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.14□□□□□ -0.95
TRAF4-215ENST00000584944 C5orf38Q86SI9 138 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 FAM19A2Q8N3H0 131 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 HIST1H2BHQ93079 126 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 URB1-AS1Q96HZ7 61 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 HIST1H2BNQ99877 126 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 HIST1H2BMQ99879 126 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 DNAH5Q8TE73 4624 aa9.14□□□□□ -0.95
TRAF4-215ENST00000584944 APOBP04114 4563 aaKnown RBP9.13□□□□□ -0.95
TRAF4-215ENST00000584944 UBE2D1P51668 147 aa9.13□□□□□ -0.95
TRAF4-215ENST00000584944 HERVK_113P63121 156 aa9.13□□□□□ -0.95
TRAF4-215ENST00000584944 WFDC2Q14508 124 aa9.13□□□□□ -0.95
TRAF4-215ENST00000584944 ZC2HC1BQ5TFG8 222 aa9.13□□□□□ -0.95
TRAF4-215ENST00000584944 KRTAP26-1Q6PEX3 210 aa9.13□□□□□ -0.95
TRAF4-215ENST00000584944 PACRGQ96M98 296 aaPredicted RBP9.13□□□□□ -0.95
TRAF4-215ENST00000584944 AMELXQ99217 191 aa9.13□□□□□ -0.95
TRAF4-215ENST00000584944 HSPB8Q9UJY1 196 aa9.13□□□□□ -0.95
TRAF4-215ENST00000584944 LEPROTL1O95214 131 aa9.12□□□□□ -0.95
TRAF4-215ENST00000584944 KRTAP10-2P60368 255 aa9.12□□□□□ -0.95
TRAF4-215ENST00000584944 HIGD2BQ4VC39 106 aa9.12□□□□□ -0.95
TRAF4-215ENST00000584944 CST9LQ9H4G1 147 aa9.12□□□□□ -0.95
TRAF4-215ENST00000584944 H0Y8G0 127 aa9.11□□□□□ -0.95
TRAF4-215ENST00000584944 CDK2AP2O75956 126 aa9.11□□□□□ -0.95
TRAF4-215ENST00000584944 GCSHP23434 173 aa9.11□□□□□ -0.95
TRAF4-215ENST00000584944 PDZD11Q5EBL8 140 aa9.11□□□□□ -0.95
TRAF4-215ENST00000584944 LINC00242Q5T6M2 205 aa9.11□□□□□ -0.95
TRAF4-215ENST00000584944 LINC00469Q8N7U9 141 aa9.11□□□□□ -0.95
TRAF4-215ENST00000584944 FAM104AQ969W3 186 aa9.11□□□□□ -0.95
TRAF4-215ENST00000584944 IFI27L1Q96BM0 104 aa9.11□□□□□ -0.95
TRAF4-215ENST00000584944 A0A096LNJ9 63 aa9.1□□□□□ -0.95
TRAF4-215ENST00000584944 FABP4P15090 132 aa9.1□□□□□ -0.95
TRAF4-215ENST00000584944 FUSP35637 526 aaKnown RBP eCLIP9.1□□□□□ -0.95
TRAF4-215ENST00000584944 LINC00173Q6ZV60 143 aa9.1□□□□□ -0.95
TRAF4-215ENST00000584944 A0A0J9YXV3 536 aa9.09□□□□□ -0.95
TRAF4-215ENST00000584944 H3BRM9 83 aa9.09□□□□□ -0.95
TRAF4-215ENST00000584944 PRSS2P07478 247 aa9.09□□□□□ -0.95
TRAF4-215ENST00000584944 ORAOV1Q8WV07 137 aa9.09□□□□□ -0.95
TRAF4-215ENST00000584944 A0A087WZ39 114 aa9.08□□□□□ -0.96
TRAF4-215ENST00000584944 GVQW2A0A096LPI5 108 aaPredicted RBP9.08□□□□□ -0.96
TRAF4-215ENST00000584944 IGHV3OR16-9A0A0B4J2B5 98 aa9.08□□□□□ -0.96
TRAF4-215ENST00000584944 TINCRA0A1B0GVN0 87 aa9.08□□□□□ -0.96
TRAF4-215ENST00000584944 S100A6P06703 90 aa9.08□□□□□ -0.96
TRAF4-215ENST00000584944 SPAG11BQ08648 103 aa9.08□□□□□ -0.96
TRAF4-215ENST00000584944 C15orf56Q8N910 161 aa9.08□□□□□ -0.96
TRAF4-215ENST00000584944 OR10D4PQ8NGN7 298 aa9.08□□□□□ -0.96
TRAF4-215ENST00000584944 CHAC1Q9BUX1 264 aa9.07□□□□□ -0.96
TRAF4-215ENST00000584944 MAP1LC3CQ9BXW4 147 aa9.07□□□□□ -0.96
TRAF4-215ENST00000584944 PKIGQ9Y2B9 76 aa9.07□□□□□ -0.96
TRAF4-215ENST00000584944 CHTOPQ9Y3Y2 248 aaKnown RBP9.07□□□□□ -0.96
TRAF4-215ENST00000584944 COX6A2Q02221 97 aa9.06□□□□□ -0.96
TRAF4-215ENST00000584944 CAMK2N2Q96S95 79 aa9.06□□□□□ -0.96
TRAF4-215ENST00000584944 TOMM7Q9P0U1 55 aa9.06□□□□□ -0.96
TRAF4-215ENST00000584944 IGHV3-64A0A075B6Q5 118 aa9.05□□□□□ -0.96
TRAF4-215ENST00000584944 CKS1BP61024 79 aa9.05□□□□□ -0.96
TRAF4-215ENST00000584944 CNBPP62633 177 aaKnown RBP9.05□□□□□ -0.96
TRAF4-215ENST00000584944 FAM19A3Q7Z5A8 133 aa9.05□□□□□ -0.96
TRAF4-215ENST00000584944 CARD19Q96LW7 228 aa9.05□□□□□ -0.96
TRAF4-215ENST00000584944 CDKN2A-AS1Q9UH64 79 aa9.05□□□□□ -0.96
TRAF4-215ENST00000584944 IGLV4-69A0A075B6H9 119 aa9.04□□□□□ -0.96
TRAF4-215ENST00000584944 TRAV12-1A0A0B4J245 112 aa9.04□□□□□ -0.96
TRAF4-215ENST00000584944 NUPR1O60356 82 aa9.04□□□□□ -0.96
TRAF4-215ENST00000584944 S100A2P29034 98 aa9.04□□□□□ -0.96
TRAF4-215ENST00000584944 LINC00310P59036 64 aa9.04□□□□□ -0.96
TRAF4-215ENST00000584944 SYCNQ0VAF6 134 aa9.04□□□□□ -0.96
TRAF4-215ENST00000584944 C6orf226Q5I0X4 101 aa9.04□□□□□ -0.96
TRAF4-215ENST00000584944 TMEM170BQ5T4T1 132 aa9.04□□□□□ -0.96
TRAF4-215ENST00000584944 LINC01561Q8N1V8 128 aa9.04□□□□□ -0.96
TRAF4-215ENST00000584944 LINC00526Q96FQ7 95 aa9.04□□□□□ -0.96
TRAF4-215ENST00000584944 DPH3Q96FX2 82 aa9.04□□□□□ -0.96
TRAF4-215ENST00000584944 NDUFA1O15239 70 aa9.03□□□□□ -0.96
TRAF4-215ENST00000584944 IGLC3P0DOY3 106 aa9.03□□□□□ -0.96
TRAF4-215ENST00000584944 Q8N1X5 172 aa9.03□□□□□ -0.96
TRAF4-215ENST00000584944 F8WDY8 70 aa9.02□□□□□ -0.97
TRAF4-215ENST00000584944 LINC01620Q4KN68 170 aa9.02□□□□□ -0.97
TRAF4-215ENST00000584944 C2orf48Q96LS8 159 aa9.02□□□□□ -0.97
TRAF4-215ENST00000584944 F8VRH5 84 aa9.01□□□□□ -0.97
TRAF4-215ENST00000584944 SPINK8P0C7L1 97 aa9.01□□□□□ -0.97
TRAF4-215ENST00000584944 PLNP26678 52 aa9.01□□□□□ -0.97
TRAF4-215ENST00000584944 COA6Q5JTJ3 125 aaKnown RBP9.01□□□□□ -0.97
TRAF4-215ENST00000584944 C9orf163Q8N9P6 203 aa9.01□□□□□ -0.97
TRAF4-215ENST00000584944 MRPL35Q9NZE8 188 aaKnown RBP9□□□□□ -0.97
TRAF4-215ENST00000584944 IGLV5-45A0A087WSX0 123 aa8.99□□□□□ -0.97
TRAF4-215ENST00000584944 C11orf86A6NJI1 115 aa8.99□□□□□ -0.97
TRAF4-215ENST00000584944 KRTAP10-1P60331 282 aa8.99□□□□□ -0.97
TRAF4-215ENST00000584944 KRTDAPP60985 99 aa8.99□□□□□ -0.97
TRAF4-215ENST00000584944 Q8IZM0 81 aa8.99□□□□□ -0.97
TRAF4-215ENST00000584944 COX7B2Q8TF08 81 aa8.99□□□□□ -0.97
TRAF4-215ENST00000584944 C20orf202A1L168 122 aa8.98□□□□□ -0.97
TRAF4-215ENST00000584944 SMIM1B2RUZ4 78 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms