RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 SCGB1D1O95968 90 aa11.22□□□□□ -0.61
CDK5RAP3-230ENST00000584042 PYY3Q5JQD4 70 aa11.22□□□□□ -0.61
CDK5RAP3-230ENST00000584042 RMI2Q96E14 147 aa11.22□□□□□ -0.61
CDK5RAP3-230ENST00000584042 C1orf43Q9BWL3 253 aa11.22□□□□□ -0.61
CDK5RAP3-230ENST00000584042 IGLV10-54A0A075B6I4 117 aa11.21□□□□□ -0.61
CDK5RAP3-230ENST00000584042 ZNF22P17026 224 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-230ENST00000584042 CD164L2Q6UWJ8 174 aa11.21□□□□□ -0.61
CDK5RAP3-230ENST00000584042 SACSQ9NZJ4 4579 aa11.2□□□□□ -0.62
CDK5RAP3-230ENST00000584042 IGHV3OR16-9A0A0B4J2B5 98 aa11.2□□□□□ -0.62
CDK5RAP3-230ENST00000584042 XCL1P47992 114 aa11.2□□□□□ -0.62
CDK5RAP3-230ENST00000584042 LINC00469Q8N7U9 141 aa11.2□□□□□ -0.62
CDK5RAP3-230ENST00000584042 Q9HAA7 133 aa11.2□□□□□ -0.62
CDK5RAP3-230ENST00000584042 SMIM6P0DI80 62 aa11.19□□□□□ -0.62
CDK5RAP3-230ENST00000584042 COX6A2Q02221 97 aa11.19□□□□□ -0.62
CDK5RAP3-230ENST00000584042 Q6ZR54 194 aa11.19□□□□□ -0.62
CDK5RAP3-230ENST00000584042 IGKV2D-24A0A075B6R9 120 aa11.18□□□□□ -0.62
CDK5RAP3-230ENST00000584042 H3BRM9 83 aa11.18□□□□□ -0.62
CDK5RAP3-230ENST00000584042 FOXI1Q12951 378 aa11.18□□□□□ -0.62
CDK5RAP3-230ENST00000584042 KRTAP26-1Q6PEX3 210 aa11.18□□□□□ -0.62
CDK5RAP3-230ENST00000584042 CDKN2A-AS1Q9UH64 79 aa11.18□□□□□ -0.62
CDK5RAP3-230ENST00000584042 COX11Q9Y6N1 276 aa11.18□□□□□ -0.62
CDK5RAP3-230ENST00000584042 GAGE12HA6NDE8 117 aa11.17□□□□□ -0.62
CDK5RAP3-230ENST00000584042 TMEM170BQ5T4T1 132 aa11.17□□□□□ -0.62
CDK5RAP3-230ENST00000584042 LINC01561Q8N1V8 128 aa11.17□□□□□ -0.62
CDK5RAP3-230ENST00000584042 A0A087WZ39 114 aa11.16□□□□□ -0.62
CDK5RAP3-230ENST00000584042 LCE6AA0A183 80 aa11.16□□□□□ -0.62
CDK5RAP3-230ENST00000584042 COX7A2LO14548 114 aa11.16□□□□□ -0.62
CDK5RAP3-230ENST00000584042 ATOH7Q8N100 152 aa11.16□□□□□ -0.62
CDK5RAP3-230ENST00000584042 TM2D2Q9BX73 214 aa11.16□□□□□ -0.62
CDK5RAP3-230ENST00000584042 TMEM223A0PJW6 202 aa11.15□□□□□ -0.62
CDK5RAP3-230ENST00000584042 HERVK_113P61574 105 aa11.15□□□□□ -0.62
CDK5RAP3-230ENST00000584042 KMT2AQ03164 3969 aa11.14□□□□□ -0.63
CDK5RAP3-230ENST00000584042 SMIM1B2RUZ4 78 aa11.13□□□□□ -0.63
CDK5RAP3-230ENST00000584042 HSBP1L1C9JCN9 74 aa11.13□□□□□ -0.63
CDK5RAP3-230ENST00000584042 M0R2N4 97 aa11.13□□□□□ -0.63
CDK5RAP3-230ENST00000584042 C5orf38Q86SI9 138 aa11.13□□□□□ -0.63
CDK5RAP3-230ENST00000584042 SPINK8P0C7L1 97 aa11.12□□□□□ -0.63
CDK5RAP3-230ENST00000584042 Q6ZRN7 208 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-230ENST00000584042 C6orf223Q8N319 242 aa11.12□□□□□ -0.63
CDK5RAP3-230ENST00000584042 IGHV1-58A0A0C4DH39 117 aa11.11□□□□□ -0.63
CDK5RAP3-230ENST00000584042 IGLV5-39A0A0G2JS06 123 aa11.11□□□□□ -0.63
CDK5RAP3-230ENST00000584042 hDV102S1A0JD36 115 aa11.11□□□□□ -0.63
CDK5RAP3-230ENST00000584042 E9PLD3 99 aa11.11□□□□□ -0.63
CDK5RAP3-230ENST00000584042 APOMO95445 188 aa11.11□□□□□ -0.63
CDK5RAP3-230ENST00000584042 MALP21145 153 aa11.11□□□□□ -0.63
CDK5RAP3-230ENST00000584042 CDPF1Q6NVV7 123 aa11.11□□□□□ -0.63
CDK5RAP3-230ENST00000584042 VAMP8Q9BV40 100 aa11.11□□□□□ -0.63
CDK5RAP3-230ENST00000584042 DNAH10Q8IVF4 4471 aa11.1□□□□□ -0.63
CDK5RAP3-230ENST00000584042 STPG4Q8N801 248 aa11.1□□□□□ -0.63
CDK5RAP3-230ENST00000584042 IGHV3-64A0A075B6Q5 118 aa11.09□□□□□ -0.63
CDK5RAP3-230ENST00000584042 MAJINQ3KP22 176 aa11.09□□□□□ -0.63
CDK5RAP3-230ENST00000584042 ANKRD39Q53RE8 183 aa11.09□□□□□ -0.63
CDK5RAP3-230ENST00000584042 DNAH2Q9P225 4427 aa11.08□□□□□ -0.63
CDK5RAP3-230ENST00000584042 PSCAO43653 123 aa11.08□□□□□ -0.64
CDK5RAP3-230ENST00000584042 C1orf134Q5TEV5 83 aa11.08□□□□□ -0.64
CDK5RAP3-230ENST00000584042 LEPROTO15243 131 aa11.07□□□□□ -0.64
CDK5RAP3-230ENST00000584042 S100A12P80511 92 aa11.07□□□□□ -0.64
CDK5RAP3-230ENST00000584042 CFAP161Q6P656 301 aa11.07□□□□□ -0.64
CDK5RAP3-230ENST00000584042 MAPKAPK5-AS1Q8N8E1 139 aa11.07□□□□□ -0.64
CDK5RAP3-230ENST00000584042 C15orf56Q8N910 161 aa11.07□□□□□ -0.64
CDK5RAP3-230ENST00000584042 ORAOV1Q8WV07 137 aa11.07□□□□□ -0.64
CDK5RAP3-230ENST00000584042 PLEKHB2Q96CS7 222 aa11.07□□□□□ -0.64
CDK5RAP3-230ENST00000584042 PAM16Q9Y3D7 125 aa11.07□□□□□ -0.64
CDK5RAP3-230ENST00000584042 SPATA45Q537H7 98 aa11.06□□□□□ -0.64
CDK5RAP3-230ENST00000584042 Q8IZM0 81 aa11.06□□□□□ -0.64
CDK5RAP3-230ENST00000584042 HYDINQ4G0P3 5121 aa11.05□□□□□ -0.64
CDK5RAP3-230ENST00000584042 GVQW2A0A096LPI5 108 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-230ENST00000584042 SPAG11BQ08648 103 aa11.05□□□□□ -0.64
CDK5RAP3-230ENST00000584042 DNAH17Q9UFH2 4485 aa11.04□□□□□ -0.64
CDK5RAP3-230ENST00000584042 IGKV2D-26A0A0A0MRZ7 120 aa11.04□□□□□ -0.64
CDK5RAP3-230ENST00000584042 USP17L23D6RBM5 183 aa11.04□□□□□ -0.64
CDK5RAP3-230ENST00000584042 J3QQQ9 107 aa11.04□□□□□ -0.64
CDK5RAP3-230ENST00000584042 TSPEAR-AS2P59090 65 aa11.04□□□□□ -0.64
CDK5RAP3-230ENST00000584042 COX7B2Q8TF08 81 aa11.04□□□□□ -0.64
CDK5RAP3-230ENST00000584042 C12orf57Q99622 126 aa11.04□□□□□ -0.64
CDK5RAP3-230ENST00000584042 LGALS3P17931 250 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-230ENST00000584042 CXCL5P42830 114 aa11.03□□□□□ -0.64
CDK5RAP3-230ENST00000584042 NMUP48645 174 aa11.03□□□□□ -0.64
CDK5RAP3-230ENST00000584042 TOMM7Q9P0U1 55 aa11.03□□□□□ -0.64
CDK5RAP3-230ENST00000584042 RYR2Q92736 4967 aa11.03□□□□□ -0.64
CDK5RAP3-230ENST00000584042 PRSS2P07478 247 aa11.02□□□□□ -0.65
CDK5RAP3-230ENST00000584042 KIAA0087Q14695 138 aa11.02□□□□□ -0.65
CDK5RAP3-230ENST00000584042 C14orf177Q52M58 125 aa11.02□□□□□ -0.65
CDK5RAP3-230ENST00000584042 SFTA2Q6UW10 78 aa11.02□□□□□ -0.65
CDK5RAP3-230ENST00000584042 LINC00518Q8N0U6 118 aa11.02□□□□□ -0.65
CDK5RAP3-230ENST00000584042 FRAS1Q86XX4 4008 aa11.01□□□□□ -0.65
CDK5RAP3-230ENST00000584042 F8WDY8 70 aa11.01□□□□□ -0.65
CDK5RAP3-230ENST00000584042 KMT2CQ8NEZ4 4911 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-230ENST00000584042 LRCOL1A6NCL2 159 aa11□□□□□ -0.65
CDK5RAP3-230ENST00000584042 ZNF561-AS1K7EIQ3 104 aa11□□□□□ -0.65
CDK5RAP3-230ENST00000584042 WFDC2Q14508 124 aa11□□□□□ -0.65
CDK5RAP3-230ENST00000584042 HIGD2BQ4VC39 106 aa11□□□□□ -0.65
CDK5RAP3-230ENST00000584042 C2orf48Q96LS8 159 aa11□□□□□ -0.65
CDK5RAP3-230ENST00000584042 NDUFA12Q9UI09 145 aa11□□□□□ -0.65
CDK5RAP3-230ENST00000584042 NDUFA1O15239 70 aa10.99□□□□□ -0.65
CDK5RAP3-230ENST00000584042 COX8AP10176 69 aa10.99□□□□□ -0.65
CDK5RAP3-230ENST00000584042 NTN5Q8WTR8 489 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-230ENST00000584042 ZNF625Q96I27 306 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-230ENST00000584042 LECT2O14960 151 aa10.98□□□□□ -0.65
CDK5RAP3-230ENST00000584042 C6orf226Q5I0X4 101 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms