RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 TM2D2Q9BX73 214 aa7.81□□□□□ -1.16
CDRT1-207ENST00000583965 MRPL35Q9NZE8 188 aaKnown RBP7.81□□□□□ -1.16
CDRT1-207ENST00000583965 CHTOPQ9Y3Y2 248 aaKnown RBP7.81□□□□□ -1.16
CDRT1-207ENST00000583965 KMT2CQ8NEZ4 4911 aaKnown RBP7.81□□□□□ -1.16
CDRT1-207ENST00000583965 HYDINQ4G0P3 5121 aa7.81□□□□□ -1.16
CDRT1-207ENST00000583965 TRAV13-1A0A0B4J241 112 aa7.8□□□□□ -1.16
CDRT1-207ENST00000583965 HSBP1L1C9JCN9 74 aa7.8□□□□□ -1.16
CDRT1-207ENST00000583965 SPATA45Q537H7 98 aa7.8□□□□□ -1.16
CDRT1-207ENST00000583965 ATOH7Q8N100 152 aa7.8□□□□□ -1.16
CDRT1-207ENST00000583965 PMCHL2Q9BQD1 86 aa7.8□□□□□ -1.16
CDRT1-207ENST00000583965 PAM16Q9Y3D7 125 aa7.8□□□□□ -1.16
CDRT1-207ENST00000583965 IGLV4-69A0A075B6H9 119 aa7.79□□□□□ -1.16
CDRT1-207ENST00000583965 IGKV2D-24A0A075B6R9 120 aa7.79□□□□□ -1.16
CDRT1-207ENST00000583965 UBE2D1P51668 147 aa7.79□□□□□ -1.16
CDRT1-207ENST00000583965 SEC11AP67812 179 aa7.79□□□□□ -1.16
CDRT1-207ENST00000583965 FAM19A3Q7Z5A8 133 aa7.79□□□□□ -1.16
CDRT1-207ENST00000583965 IGLV10-54A0A075B6I4 117 aa7.78□□□□□ -1.16
CDRT1-207ENST00000583965 IGLC3P0DOY3 106 aa7.78□□□□□ -1.16
CDRT1-207ENST00000583965 MAJINQ3KP22 176 aa7.78□□□□□ -1.16
CDRT1-207ENST00000583965 ZC2HC1BQ5TFG8 222 aa7.78□□□□□ -1.16
CDRT1-207ENST00000583965 Q6ZRN7 208 aaPredicted RBP7.78□□□□□ -1.16
CDRT1-207ENST00000583965 CHCHD10Q8WYQ3 142 aaPredicted RBP7.78□□□□□ -1.16
CDRT1-207ENST00000583965 FRAS1Q86XX4 4008 aa7.77□□□□□ -1.17
CDRT1-207ENST00000583965 hDV102S1A0JD36 115 aa7.77□□□□□ -1.17
CDRT1-207ENST00000583965 PSCAO43653 123 aa7.77□□□□□ -1.17
CDRT1-207ENST00000583965 KRTAP26-1Q6PEX3 210 aa7.77□□□□□ -1.17
CDRT1-207ENST00000583965 CD164L2Q6UWJ8 174 aa7.77□□□□□ -1.17
CDRT1-207ENST00000583965 TINCRA0A1B0GVN0 87 aa7.76□□□□□ -1.17
CDRT1-207ENST00000583965 XCL1P47992 114 aa7.76□□□□□ -1.17
CDRT1-207ENST00000583965 HERVK_113P63121 156 aa7.76□□□□□ -1.17
CDRT1-207ENST00000583965 LINC00242Q5T6M2 205 aa7.76□□□□□ -1.17
CDRT1-207ENST00000583965 PRO1933Q9H354 126 aa7.76□□□□□ -1.17
CDRT1-207ENST00000583965 GAGE12HA6NDE8 117 aa7.75□□□□□ -1.17
CDRT1-207ENST00000583965 C11orf86A6NJI1 115 aa7.75□□□□□ -1.17
CDRT1-207ENST00000583965 FOXI1Q12951 378 aa7.75□□□□□ -1.17
CDRT1-207ENST00000583965 ANKRD39Q53RE8 183 aa7.75□□□□□ -1.17
CDRT1-207ENST00000583965 MIEN1Q9BRT3 115 aa7.75□□□□□ -1.17
CDRT1-207ENST00000583965 RYR2Q92736 4967 aa7.74□□□□□ -1.17
CDRT1-207ENST00000583965 DNAH10Q8IVF4 4471 aa7.74□□□□□ -1.17
CDRT1-207ENST00000583965 IGHV3OR16-9A0A0B4J2B5 98 aa7.74□□□□□ -1.17
CDRT1-207ENST00000583965 A0A0J9YXV3 536 aa7.74□□□□□ -1.17
CDRT1-207ENST00000583965 RTL8CO15255 209 aa7.74□□□□□ -1.17
CDRT1-207ENST00000583965 DDTP30046 118 aa7.74□□□□□ -1.17
CDRT1-207ENST00000583965 STPG4Q8N801 248 aa7.74□□□□□ -1.17
CDRT1-207ENST00000583965 GEMIN7Q9H840 131 aaKnown RBP7.74□□□□□ -1.17
CDRT1-207ENST00000583965 UQCR10Q9UDW1 63 aa7.74□□□□□ -1.17
CDRT1-207ENST00000583965 IGLV5-45A0A087WSX0 123 aa7.73□□□□□ -1.17
CDRT1-207ENST00000583965 COX7A2LO14548 114 aa7.73□□□□□ -1.17
CDRT1-207ENST00000583965 DLEU1O43261 78 aa7.73□□□□□ -1.17
CDRT1-207ENST00000583965 COX8AP10176 69 aa7.73□□□□□ -1.17
CDRT1-207ENST00000583965 LINC00336Q6ZUF6 198 aa7.73□□□□□ -1.17
CDRT1-207ENST00000583965 LINC01561Q8N1V8 128 aa7.73□□□□□ -1.17
CDRT1-207ENST00000583965 CHAC1Q9BUX1 264 aa7.73□□□□□ -1.17
CDRT1-207ENST00000583965 DNAH2Q9P225 4427 aa7.73□□□□□ -1.17
CDRT1-207ENST00000583965 A0A087WZ39 114 aa7.72□□□□□ -1.17
CDRT1-207ENST00000583965 PCP4L1A6NKN8 68 aa7.72□□□□□ -1.17
CDRT1-207ENST00000583965 E9PLD3 99 aa7.72□□□□□ -1.17
CDRT1-207ENST00000583965 COX6A2Q02221 97 aa7.72□□□□□ -1.17
CDRT1-207ENST00000583965 CFAP161Q6P656 301 aa7.72□□□□□ -1.17
CDRT1-207ENST00000583965 MAPKAPK5-AS1Q8N8E1 139 aa7.72□□□□□ -1.17
CDRT1-207ENST00000583965 APOMO95445 188 aa7.71□□□□□ -1.18
CDRT1-207ENST00000583965 ZNF22P17026 224 aaPredicted RBP7.71□□□□□ -1.18
CDRT1-207ENST00000583965 HERVK_113P61574 105 aa7.71□□□□□ -1.18
CDRT1-207ENST00000583965 C14orf177Q52M58 125 aa7.71□□□□□ -1.18
CDRT1-207ENST00000583965 SLC25A34Q6PIV7 304 aa7.71□□□□□ -1.18
CDRT1-207ENST00000583965 C5orf38Q86SI9 138 aa7.71□□□□□ -1.18
CDRT1-207ENST00000583965 BOD1L2Q8IYS8 172 aa7.71□□□□□ -1.18
CDRT1-207ENST00000583965 LINC00469Q8N7U9 141 aa7.71□□□□□ -1.18
CDRT1-207ENST00000583965 IGHV1-58A0A0C4DH39 117 aa7.7□□□□□ -1.18
CDRT1-207ENST00000583965 TMEM223A0PJW6 202 aa7.7□□□□□ -1.18
CDRT1-207ENST00000583965 LRCOL1A6NCL2 159 aa7.7□□□□□ -1.18
CDRT1-207ENST00000583965 H3BRM9 83 aa7.7□□□□□ -1.18
CDRT1-207ENST00000583965 MALP21145 153 aa7.7□□□□□ -1.18
CDRT1-207ENST00000583965 C14orf144Q96I85 54 aa7.7□□□□□ -1.18
CDRT1-207ENST00000583965 CDKN2A-AS1Q9UH64 79 aa7.7□□□□□ -1.18
CDRT1-207ENST00000583965 IGKV2D-26A0A0A0MRZ7 120 aa7.69□□□□□ -1.18
CDRT1-207ENST00000583965 USP17L23D6RBM5 183 aa7.69□□□□□ -1.18
CDRT1-207ENST00000583965 EREGO14944 169 aa7.69□□□□□ -1.18
CDRT1-207ENST00000583965 TMEM170BQ5T4T1 132 aa7.69□□□□□ -1.18
CDRT1-207ENST00000583965 DNAH17Q9UFH2 4485 aa7.69□□□□□ -1.18
CDRT1-207ENST00000583965 IGHV3-64A0A075B6Q5 118 aa7.68□□□□□ -1.18
CDRT1-207ENST00000583965 A0A087WTM6 91 aa7.68□□□□□ -1.18
CDRT1-207ENST00000583965 TNP2Q05952 138 aa7.68□□□□□ -1.18
CDRT1-207ENST00000583965 C15orf56Q8N910 161 aa7.68□□□□□ -1.18
CDRT1-207ENST00000583965 GVQW2A0A096LPI5 108 aaPredicted RBP7.67□□□□□ -1.18
CDRT1-207ENST00000583965 LINC00587B1AMM8 73 aa7.67□□□□□ -1.18
CDRT1-207ENST00000583965 LEPROTO15243 131 aa7.67□□□□□ -1.18
CDRT1-207ENST00000583965 NMUP48645 174 aa7.67□□□□□ -1.18
CDRT1-207ENST00000583965 HNRNPA3P51991 378 aaKnown RBP7.67□□□□□ -1.18
CDRT1-207ENST00000583965 PCP2Q8IVA1 136 aa7.67□□□□□ -1.18
CDRT1-207ENST00000583965 SMIM1B2RUZ4 78 aa7.66□□□□□ -1.18
CDRT1-207ENST00000583965 LECT2O14960 151 aa7.66□□□□□ -1.18
CDRT1-207ENST00000583965 WFDC2Q14508 124 aa7.66□□□□□ -1.18
CDRT1-207ENST00000583965 Q8N814 137 aa7.66□□□□□ -1.18
CDRT1-207ENST00000583965 ORAOV1Q8WV07 137 aa7.66□□□□□ -1.18
CDRT1-207ENST00000583965 PLEKHB2Q96CS7 222 aa7.66□□□□□ -1.18
CDRT1-207ENST00000583965 HIGD1BQ9P298 99 aa7.66□□□□□ -1.18
CDRT1-207ENST00000583965 IGLV5-39A0A0G2JS06 123 aa7.65□□□□□ -1.18
CDRT1-207ENST00000583965 ZNF561-AS1K7EIQ3 104 aa7.65□□□□□ -1.18
CDRT1-207ENST00000583965 C2orf91Q6ZV80 131 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms