RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 PANO1I0J062 215 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HIST1H2BKO60814 126 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HSBP1O75506 76 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HIST1H2BJP06899 126 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 CHTF8P0CG12 524 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 FGF6P10767 208 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HIST1H2BOP23527 126 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HIST1H2BBP33778 126 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HIST1H2BDP58876 126 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HIST1H2BCP62807 126 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 CIRBPQ14011 172 aaKnown RBP5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HIST2H2BEQ16778 126 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 SDIM1Q6ZPB5 146 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HIST1H2BHQ93079 126 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HIST1H2BNQ99877 126 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HIST1H2BMQ99879 126 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 CYSLTR1Q9Y271 337 aa5.57□□□□□ -1.52
CDK5RAP3-229ENST00000583697 A0A087WYN8 130 aa5.56□□□□□ -1.52
CDK5RAP3-229ENST00000583697 GAGE12HA6NDE8 117 aa5.56□□□□□ -1.52
CDK5RAP3-229ENST00000583697 LINC01546A6NGU7 62 aa5.56□□□□□ -1.52
CDK5RAP3-229ENST00000583697 S100A6P06703 90 aa5.56□□□□□ -1.52
CDK5RAP3-229ENST00000583697 ZNF25P17030 456 aaPredicted RBP5.56□□□□□ -1.52
CDK5RAP3-229ENST00000583697 CFAP161Q6P656 301 aa5.56□□□□□ -1.52
CDK5RAP3-229ENST00000583697 C2orf66Q6UXQ4 117 aa5.56□□□□□ -1.52
CDK5RAP3-229ENST00000583697 OR5A1Q8NGJ0 315 aa5.56□□□□□ -1.52
CDK5RAP3-229ENST00000583697 SPACA4Q8TDM5 124 aa5.56□□□□□ -1.52
CDK5RAP3-229ENST00000583697 C7orf33Q8WU49 177 aa5.56□□□□□ -1.52
CDK5RAP3-229ENST00000583697 SCGB3A1Q96QR1 104 aa5.56□□□□□ -1.52
CDK5RAP3-229ENST00000583697 SERF1AO75920 110 aa5.55□□□□□ -1.52
CDK5RAP3-229ENST00000583697 RPL39P62891 51 aaKnown RBP5.55□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HIGD2BQ4VC39 106 aa5.55□□□□□ -1.52
CDK5RAP3-229ENST00000583697 Q6ZRU5 148 aa5.55□□□□□ -1.52
CDK5RAP3-229ENST00000583697 MRPL52Q86TS9 123 aaKnown RBP5.55□□□□□ -1.52
CDK5RAP3-229ENST00000583697 C15orf56Q8N910 161 aa5.55□□□□□ -1.52
CDK5RAP3-229ENST00000583697 TOMM6Q96B49 74 aa5.55□□□□□ -1.52
CDK5RAP3-229ENST00000583697 TIMM21Q9BVV7 248 aa5.55□□□□□ -1.52
CDK5RAP3-229ENST00000583697 SPANXA1Q9NS26 97 aa5.55□□□□□ -1.52
CDK5RAP3-229ENST00000583697 UBR4Q5T4S7 5183 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 IGKV2-24A0A0C4DH68 120 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 HBDP02042 147 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 PMCHL1Q16048 86 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 PAPPA-AS1Q5QFB9 102 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 ERASQ7Z444 233 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 FAM19A2Q8N3H0 131 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 ZNF664Q8N3J9 261 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 URB1-AS1Q96HZ7 61 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 VCX2Q9H322 139 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 PKIGQ9Y2B9 76 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 UBE2D4Q9Y2X8 147 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 PYGO1Q9Y3Y4 419 aa5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 CSDC2Q9Y534 153 aaKnown RBP5.54□□□□□ -1.52
CDK5RAP3-229ENST00000583697 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.53□□□□□ -1.52
CDK5RAP3-229ENST00000583697 NUPR1O60356 82 aa5.53□□□□□ -1.52
CDK5RAP3-229ENST00000583697 ATP5LO75964 103 aa5.53□□□□□ -1.52
CDK5RAP3-229ENST00000583697 COX6A2Q02221 97 aa5.53□□□□□ -1.52
CDK5RAP3-229ENST00000583697 MAJINQ3KP22 176 aa5.53□□□□□ -1.52
CDK5RAP3-229ENST00000583697 Q6ZN92 141 aa5.53□□□□□ -1.52
CDK5RAP3-229ENST00000583697 CHCHD10Q8WYQ3 142 aaPredicted RBP5.53□□□□□ -1.52
CDK5RAP3-229ENST00000583697 TMEM141Q96I45 108 aa5.53□□□□□ -1.52
CDK5RAP3-229ENST00000583697 CDC42SE2Q9NRR3 84 aa5.53□□□□□ -1.52
CDK5RAP3-229ENST00000583697 GVQW2A0A096LPI5 108 aaPredicted RBP5.52□□□□□ -1.53
CDK5RAP3-229ENST00000583697 IGIPA6NJ69 53 aa5.52□□□□□ -1.53
CDK5RAP3-229ENST00000583697 LEPROTL1O95214 131 aa5.52□□□□□ -1.53
CDK5RAP3-229ENST00000583697 SLPIP03973 132 aa5.52□□□□□ -1.53
CDK5RAP3-229ENST00000583697 NPSP0C0P6 89 aa5.52□□□□□ -1.53
CDK5RAP3-229ENST00000583697 FABP4P15090 132 aa5.52□□□□□ -1.53
CDK5RAP3-229ENST00000583697 MRPS36P82909 103 aaKnown RBP5.52□□□□□ -1.53
CDK5RAP3-229ENST00000583697 COA6Q5JTJ3 125 aaKnown RBP5.52□□□□□ -1.53
CDK5RAP3-229ENST00000583697 TIMM17AQ99595 171 aa5.52□□□□□ -1.53
CDK5RAP3-229ENST00000583697 OPRPNQ99935 248 aaPredicted RBP5.52□□□□□ -1.53
CDK5RAP3-229ENST00000583697 PLAC8Q9NZF1 115 aa5.52□□□□□ -1.53
CDK5RAP3-229ENST00000583697 S100A2P29034 98 aa5.51□□□□□ -1.53
CDK5RAP3-229ENST00000583697 XCL1P47992 114 aa5.51□□□□□ -1.53
CDK5RAP3-229ENST00000583697 SS18Q15532 418 aa5.51□□□□□ -1.53
CDK5RAP3-229ENST00000583697 PDZD11Q5EBL8 140 aa5.51□□□□□ -1.53
CDK5RAP3-229ENST00000583697 TEX43Q6ZNM6 134 aa5.51□□□□□ -1.53
CDK5RAP3-229ENST00000583697 STPG4Q8N801 248 aa5.51□□□□□ -1.53
CDK5RAP3-229ENST00000583697 CARD19Q96LW7 228 aa5.51□□□□□ -1.53
CDK5RAP3-229ENST00000583697 HSPB8Q9UJY1 196 aa5.51□□□□□ -1.53
CDK5RAP3-229ENST00000583697 IGLV4-3A0A075B6K6 122 aa5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 A0A096LNI7 61 aa5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 TRAV13-1A0A0B4J241 112 aa5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 IGHV1-58A0A0C4DH39 117 aa5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 CCL25O15444 150 aa5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 LINC00310P59036 64 aa5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 SNRPEP62304 92 aaKnown RBP5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 FOXI1Q12951 378 aa5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 RNASE13Q5GAN3 156 aaKnown RBP5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 IFI27L1Q96BM0 104 aa5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 C2orf88Q9BSF0 95 aa5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 LINC00474Q9P2X8 69 aa5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 TNXBP22105 4242 aa5.5□□□□□ -1.53
CDK5RAP3-229ENST00000583697 A0A096LNJ9 63 aa5.49□□□□□ -1.53
CDK5RAP3-229ENST00000583697 LINC00959A0A1B0GUT2 108 aa5.49□□□□□ -1.53
CDK5RAP3-229ENST00000583697 IFITM10A6NMD0 228 aa5.49□□□□□ -1.53
CDK5RAP3-229ENST00000583697 ZNF561-AS1K7EIQ3 104 aa5.49□□□□□ -1.53
CDK5RAP3-229ENST00000583697 MT1HL1P0DM35 61 aa5.49□□□□□ -1.53
CDK5RAP3-229ENST00000583697 PRR3P79522 188 aaKnown RBP5.49□□□□□ -1.53
CDK5RAP3-229ENST00000583697 Q6ZUT4 128 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms