RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 F8VRH5 84 aa10.93□□□□□ -0.66
CDK5RAP3-228ENST00000583363 IGLC3P0DOY3 106 aa10.93□□□□□ -0.66
CDK5RAP3-228ENST00000583363 COX6A2Q02221 97 aa10.93□□□□□ -0.66
CDK5RAP3-228ENST00000583363 LINC01545Q5VT33 79 aa10.93□□□□□ -0.66
CDK5RAP3-228ENST00000583363 CHCHD10Q8WYQ3 142 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-228ENST00000583363 Q9HAA7 133 aa10.93□□□□□ -0.66
CDK5RAP3-228ENST00000583363 MRPL35Q9NZE8 188 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-228ENST00000583363 SEC11AP67812 179 aa10.92□□□□□ -0.66
CDK5RAP3-228ENST00000583363 KRTAP26-1Q6PEX3 210 aa10.92□□□□□ -0.66
CDK5RAP3-228ENST00000583363 NFE4Q86UQ8 179 aa10.92□□□□□ -0.66
CDK5RAP3-228ENST00000583363 RYR1P21817 5038 aa10.91□□□□□ -0.66
CDK5RAP3-228ENST00000583363 IGKV2D-24A0A075B6R9 120 aa10.91□□□□□ -0.66
CDK5RAP3-228ENST00000583363 XCL1P47992 114 aa10.91□□□□□ -0.66
CDK5RAP3-228ENST00000583363 CD164L2Q6UWJ8 174 aa10.91□□□□□ -0.66
CDK5RAP3-228ENST00000583363 RMI2Q96E14 147 aa10.91□□□□□ -0.66
CDK5RAP3-228ENST00000583363 PMCHL2Q9BQD1 86 aa10.91□□□□□ -0.66
CDK5RAP3-228ENST00000583363 C1orf43Q9BWL3 253 aa10.91□□□□□ -0.66
CDK5RAP3-228ENST00000583363 IGHV3OR16-9A0A0B4J2B5 98 aa10.9□□□□□ -0.66
CDK5RAP3-228ENST00000583363 HERVK_113P63121 156 aa10.9□□□□□ -0.66
CDK5RAP3-228ENST00000583363 GEMIN7Q9H840 131 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-228ENST00000583363 GAGE12HA6NDE8 117 aa10.89□□□□□ -0.67
CDK5RAP3-228ENST00000583363 C11orf86A6NJI1 115 aa10.89□□□□□ -0.67
CDK5RAP3-228ENST00000583363 FOXI1Q12951 378 aa10.89□□□□□ -0.67
CDK5RAP3-228ENST00000583363 TM2D2Q9BX73 214 aa10.89□□□□□ -0.67
CDK5RAP3-228ENST00000583363 IGLV5-45A0A087WSX0 123 aa10.88□□□□□ -0.67
CDK5RAP3-228ENST00000583363 C20orf202A1L168 122 aa10.88□□□□□ -0.67
CDK5RAP3-228ENST00000583363 DPM2O94777 84 aa10.88□□□□□ -0.67
CDK5RAP3-228ENST00000583363 IGKCP01834 107 aa10.88□□□□□ -0.67
CDK5RAP3-228ENST00000583363 COX11Q9Y6N1 276 aa10.88□□□□□ -0.67
CDK5RAP3-228ENST00000583363 DNAH2Q9P225 4427 aa10.88□□□□□ -0.67
CDK5RAP3-228ENST00000583363 PLNP26678 52 aa10.87□□□□□ -0.67
CDK5RAP3-228ENST00000583363 C6orf223Q8N319 242 aa10.87□□□□□ -0.67
CDK5RAP3-228ENST00000583363 CHAC1Q9BUX1 264 aa10.87□□□□□ -0.67
CDK5RAP3-228ENST00000583363 CDKN2A-AS1Q9UH64 79 aa10.87□□□□□ -0.67
CDK5RAP3-228ENST00000583363 FAT2Q9NYQ8 4349 aa10.87□□□□□ -0.67
CDK5RAP3-228ENST00000583363 SCGB1D1O95968 90 aa10.86□□□□□ -0.67
CDK5RAP3-228ENST00000583363 ZNF22P17026 224 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-228ENST00000583363 JOSD1Q15040 202 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-228ENST00000583363 Q6ZRN7 208 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-228ENST00000583363 C5orf38Q86SI9 138 aa10.86□□□□□ -0.67
CDK5RAP3-228ENST00000583363 A0A087WZ39 114 aa10.85□□□□□ -0.67
CDK5RAP3-228ENST00000583363 C1orf134Q5TEV5 83 aa10.85□□□□□ -0.67
CDK5RAP3-228ENST00000583363 LINC01561Q8N1V8 128 aa10.85□□□□□ -0.67
CDK5RAP3-228ENST00000583363 LINC00469Q8N7U9 141 aa10.85□□□□□ -0.67
CDK5RAP3-228ENST00000583363 MAPKAPK5-AS1Q8N8E1 139 aa10.85□□□□□ -0.67
CDK5RAP3-228ENST00000583363 PKHD1P08F94 4074 aa10.84□□□□□ -0.67
CDK5RAP3-228ENST00000583363 COX7A2LO14548 114 aa10.84□□□□□ -0.67
CDK5RAP3-228ENST00000583363 AKR1D1P51857 326 aa10.84□□□□□ -0.67
CDK5RAP3-228ENST00000583363 TMEM170BQ5T4T1 132 aa10.84□□□□□ -0.67
CDK5RAP3-228ENST00000583363 H3BRM9 83 aa10.83□□□□□ -0.68
CDK5RAP3-228ENST00000583363 DNAH17Q9UFH2 4485 aa10.82□□□□□ -0.68
CDK5RAP3-228ENST00000583363 DYNC1H1Q14204 4646 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-228ENST00000583363 TMEM223A0PJW6 202 aa10.82□□□□□ -0.68
CDK5RAP3-228ENST00000583363 PYY3Q5JQD4 70 aa10.82□□□□□ -0.68
CDK5RAP3-228ENST00000583363 PSCAO43653 123 aa10.81□□□□□ -0.68
CDK5RAP3-228ENST00000583363 MALP21145 153 aa10.81□□□□□ -0.68
CDK5RAP3-228ENST00000583363 ATOH7Q8N100 152 aa10.81□□□□□ -0.68
CDK5RAP3-228ENST00000583363 SPINK8P0C7L1 97 aa10.8□□□□□ -0.68
CDK5RAP3-228ENST00000583363 IGHV3-64A0A075B6Q5 118 aa10.79□□□□□ -0.68
CDK5RAP3-228ENST00000583363 IGHV1-58A0A0C4DH39 117 aa10.79□□□□□ -0.68
CDK5RAP3-228ENST00000583363 SMIM1B2RUZ4 78 aa10.79□□□□□ -0.68
CDK5RAP3-228ENST00000583363 CFAP161Q6P656 301 aa10.79□□□□□ -0.68
CDK5RAP3-228ENST00000583363 STPG4Q8N801 248 aa10.79□□□□□ -0.68
CDK5RAP3-228ENST00000583363 APOMO95445 188 aa10.78□□□□□ -0.68
CDK5RAP3-228ENST00000583363 IGLV5-39A0A0G2JS06 123 aa10.77□□□□□ -0.69
CDK5RAP3-228ENST00000583363 hDV102S1A0JD36 115 aa10.77□□□□□ -0.69
CDK5RAP3-228ENST00000583363 LRCOL1A6NCL2 159 aa10.77□□□□□ -0.69
CDK5RAP3-228ENST00000583363 RTL8CO15255 209 aa10.77□□□□□ -0.69
CDK5RAP3-228ENST00000583363 C15orf56Q8N910 161 aa10.77□□□□□ -0.69
CDK5RAP3-228ENST00000583363 DNAH11Q96DT5 4516 aa10.77□□□□□ -0.69
CDK5RAP3-228ENST00000583363 A0A1B0GVY2 172 aa10.76□□□□□ -0.69
CDK5RAP3-228ENST00000583363 USP17L23D6RBM5 183 aa10.76□□□□□ -0.69
CDK5RAP3-228ENST00000583363 HERVK_113P61574 105 aa10.76□□□□□ -0.69
CDK5RAP3-228ENST00000583363 ORAOV1Q8WV07 137 aa10.76□□□□□ -0.69
CDK5RAP3-228ENST00000583363 ABCA13Q86UQ4 5058 aa10.75□□□□□ -0.69
CDK5RAP3-228ENST00000583363 E9PLD3 99 aa10.75□□□□□ -0.69
CDK5RAP3-228ENST00000583363 SMIM6P0DI80 62 aa10.75□□□□□ -0.69
CDK5RAP3-228ENST00000583363 WFDC2Q14508 124 aa10.75□□□□□ -0.69
CDK5RAP3-228ENST00000583363 KIAA0087Q14695 138 aa10.75□□□□□ -0.69
CDK5RAP3-228ENST00000583363 MAJINQ3KP22 176 aa10.75□□□□□ -0.69
CDK5RAP3-228ENST00000583363 PKD1P98161 4303 aa10.74□□□□□ -0.69
CDK5RAP3-228ENST00000583363 LECT2O14960 151 aa10.74□□□□□ -0.69
CDK5RAP3-228ENST00000583363 LEPROTO15243 131 aa10.74□□□□□ -0.69
CDK5RAP3-228ENST00000583363 ANKRD39Q53RE8 183 aa10.74□□□□□ -0.69
CDK5RAP3-228ENST00000583363 LINC00336Q6ZUF6 198 aa10.74□□□□□ -0.69
CDK5RAP3-228ENST00000583363 GVQW2A0A096LPI5 108 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-228ENST00000583363 HSBP1L1C9JCN9 74 aa10.73□□□□□ -0.69
CDK5RAP3-228ENST00000583363 CDPF1Q6NVV7 123 aa10.73□□□□□ -0.69
CDK5RAP3-228ENST00000583363 COX7B2Q8TF08 81 aa10.73□□□□□ -0.69
CDK5RAP3-228ENST00000583363 A0A087WTM6 91 aa10.72□□□□□ -0.69
CDK5RAP3-228ENST00000583363 HIGD2BQ4VC39 106 aa10.72□□□□□ -0.69
CDK5RAP3-228ENST00000583363 Q8IZM0 81 aa10.72□□□□□ -0.69
CDK5RAP3-228ENST00000583363 PLEKHB2Q96CS7 222 aa10.72□□□□□ -0.69
CDK5RAP3-228ENST00000583363 TOMM7Q9P0U1 55 aa10.72□□□□□ -0.69
CDK5RAP3-228ENST00000583363 IGKV2D-26A0A0A0MRZ7 120 aa10.71□□□□□ -0.69
CDK5RAP3-228ENST00000583363 ZNF561-AS1K7EIQ3 104 aa10.71□□□□□ -0.69
CDK5RAP3-228ENST00000583363 PRSS2P07478 247 aa10.71□□□□□ -0.69
CDK5RAP3-228ENST00000583363 SPAG11BQ08648 103 aa10.71□□□□□ -0.69
CDK5RAP3-228ENST00000583363 C14orf177Q52M58 125 aa10.71□□□□□ -0.69
CDK5RAP3-228ENST00000583363 C6orf226Q5I0X4 101 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms