RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 IGKV3OR2-268A0A0C4DH90 116 aa4.44□□□□□ -1.7
CDK5RAP3-221ENST00000581662 FAM168BA1KXE4 195 aa4.44□□□□□ -1.7
CDK5RAP3-221ENST00000581662 CCL25O15444 150 aa4.44□□□□□ -1.7
CDK5RAP3-221ENST00000581662 FGF6P10767 208 aa4.44□□□□□ -1.7
CDK5RAP3-221ENST00000581662 AMTP48728 403 aa4.44□□□□□ -1.7
CDK5RAP3-221ENST00000581662 UBE2D1P51668 147 aa4.44□□□□□ -1.7
CDK5RAP3-221ENST00000581662 AKR1C8PQ5T2L2 129 aa4.44□□□□□ -1.7
CDK5RAP3-221ENST00000581662 TMUB2Q71RG4 321 aa4.44□□□□□ -1.7
CDK5RAP3-221ENST00000581662 CARD19Q96LW7 228 aa4.44□□□□□ -1.7
CDK5RAP3-221ENST00000581662 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
CDK5RAP3-221ENST00000581662 IGLV7-46A0A075B6I9 117 aa4.43□□□□□ -1.7
CDK5RAP3-221ENST00000581662 KRTAP4-16G5E9R7 235 aaPredicted RBP4.43□□□□□ -1.7
CDK5RAP3-221ENST00000581662 TCAPO15273 167 aa4.43□□□□□ -1.7
CDK5RAP3-221ENST00000581662 ARPC5O15511 151 aa4.43□□□□□ -1.7
CDK5RAP3-221ENST00000581662 C9orf62Q8N4C0 152 aa4.43□□□□□ -1.7
CDK5RAP3-221ENST00000581662 KCNRGQ8N5I3 272 aa4.43□□□□□ -1.7
CDK5RAP3-221ENST00000581662 OR2D3Q8NGH3 330 aa4.43□□□□□ -1.7
CDK5RAP3-221ENST00000581662 OR5A1Q8NGJ0 315 aa4.43□□□□□ -1.7
CDK5RAP3-221ENST00000581662 STOML3Q8TAV4 291 aa4.43□□□□□ -1.7
CDK5RAP3-221ENST00000581662 C2orf88Q9BSF0 95 aa4.43□□□□□ -1.7
CDK5RAP3-221ENST00000581662 MED9Q9NWA0 146 aa4.43□□□□□ -1.7
CDK5RAP3-221ENST00000581662 IGLV4-69A0A075B6H9 119 aa4.42□□□□□ -1.7
CDK5RAP3-221ENST00000581662 BORCS7-ASMTA0A0B4J1R7 106 aa4.42□□□□□ -1.7
CDK5RAP3-221ENST00000581662 TRBV6-5A0A0K0K1A5 114 aa4.42□□□□□ -1.7
CDK5RAP3-221ENST00000581662 XCL1P47992 114 aa4.42□□□□□ -1.7
CDK5RAP3-221ENST00000581662 SULT1A2P50226 295 aa4.42□□□□□ -1.7
CDK5RAP3-221ENST00000581662 ZNF345Q14585 488 aa4.42□□□□□ -1.7
CDK5RAP3-221ENST00000581662 C9orf116Q5BN46 136 aaPredicted RBP4.42□□□□□ -1.7
CDK5RAP3-221ENST00000581662 MRPL52Q86TS9 123 aaKnown RBP4.42□□□□□ -1.7
CDK5RAP3-221ENST00000581662 FAM213BQ8TBF2 198 aa4.42□□□□□ -1.7
CDK5RAP3-221ENST00000581662 SFT2D1Q8WV19 159 aa4.42□□□□□ -1.7
CDK5RAP3-221ENST00000581662 CDC42SE2Q9NRR3 84 aa4.42□□□□□ -1.7
CDK5RAP3-221ENST00000581662 SDHAF1A6NFY7 115 aa4.41□□□□□ -1.7
CDK5RAP3-221ENST00000581662 IGLV7-43P04211 117 aa4.41□□□□□ -1.7
CDK5RAP3-221ENST00000581662 POLR2KP53803 58 aaKnown RBP4.41□□□□□ -1.7
CDK5RAP3-221ENST00000581662 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
CDK5RAP3-221ENST00000581662 TMEM242Q9NWH2 141 aa4.41□□□□□ -1.7
CDK5RAP3-221ENST00000581662 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
CDK5RAP3-221ENST00000581662 IGHV1-58A0A0C4DH39 117 aa4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 H7C423 109 aa4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 NCR2O95944 276 aa4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 CAMPP49913 170 aa4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 SYCNQ0VAF6 134 aa4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 RNASE13Q5GAN3 156 aaKnown RBP4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 C1orf137Q5JT78 98 aa4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 CLLU1Q5K131 121 aa4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 TCTE3Q8IZS6 198 aa4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 TPPP3Q9BW30 176 aa4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 RPP21Q9H633 154 aaKnown RBP4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 LINC00474Q9P2X8 69 aa4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 CARHSP1Q9Y2V2 147 aaKnown RBP4.4□□□□□ -1.71
CDK5RAP3-221ENST00000581662 A0A087X002 238 aa4.39□□□□□ -1.71
CDK5RAP3-221ENST00000581662 TSTD3H0UI37 97 aa4.39□□□□□ -1.71
CDK5RAP3-221ENST00000581662 MT-ND6P03923 174 aa4.39□□□□□ -1.71
CDK5RAP3-221ENST00000581662 ZNF25P17030 456 aaPredicted RBP4.39□□□□□ -1.71
CDK5RAP3-221ENST00000581662 G0S2P27469 103 aa4.39□□□□□ -1.71
CDK5RAP3-221ENST00000581662 CD164L2Q6UWJ8 174 aa4.39□□□□□ -1.71
CDK5RAP3-221ENST00000581662 PET117Q6UWS5 81 aa4.39□□□□□ -1.71
CDK5RAP3-221ENST00000581662 Q6ZUT4 128 aa4.39□□□□□ -1.71
CDK5RAP3-221ENST00000581662 SMIM12Q96EX1 92 aa4.39□□□□□ -1.71
CDK5RAP3-221ENST00000581662 OPRPNQ99935 248 aaPredicted RBP4.39□□□□□ -1.71
CDK5RAP3-221ENST00000581662 UBE2D4Q9Y2X8 147 aa4.39□□□□□ -1.71
CDK5RAP3-221ENST00000581662 TRBV27A0A0K0K1C4 114 aa4.38□□□□□ -1.71
CDK5RAP3-221ENST00000581662 LOC107984640A0A0U1RRK4 108 aa4.38□□□□□ -1.71
CDK5RAP3-221ENST00000581662 BCL2L11O43521 198 aa4.38□□□□□ -1.71
CDK5RAP3-221ENST00000581662 APOMO95445 188 aa4.38□□□□□ -1.71
CDK5RAP3-221ENST00000581662 TRGC1P0CF51 173 aa4.38□□□□□ -1.71
CDK5RAP3-221ENST00000581662 SMIM17P0DL12 118 aa4.38□□□□□ -1.71
CDK5RAP3-221ENST00000581662 RAB5BP61020 215 aa4.38□□□□□ -1.71
CDK5RAP3-221ENST00000581662 GAGE2BQ13066 116 aa4.38□□□□□ -1.71
CDK5RAP3-221ENST00000581662 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
CDK5RAP3-221ENST00000581662 MTURNQ8N3F0 131 aa4.38□□□□□ -1.71
CDK5RAP3-221ENST00000581662 GNG13Q9P2W3 67 aa4.38□□□□□ -1.71
CDK5RAP3-221ENST00000581662 C6orf48Q9UBA6 75 aa4.38□□□□□ -1.71
CDK5RAP3-221ENST00000581662 UMAD1C9J7I0 102 aa4.37□□□□□ -1.71
CDK5RAP3-221ENST00000581662 F2Z2F3 143 aa4.37□□□□□ -1.71
CDK5RAP3-221ENST00000581662 APCSP02743 223 aa4.37□□□□□ -1.71
CDK5RAP3-221ENST00000581662 PRSS2P07478 247 aa4.37□□□□□ -1.71
CDK5RAP3-221ENST00000581662 SEC61BP60468 96 aaKnown RBP4.37□□□□□ -1.71
CDK5RAP3-221ENST00000581662 RPS20P60866 119 aaKnown RBP4.37□□□□□ -1.71
CDK5RAP3-221ENST00000581662 C9orf129Q5T035 196 aaKnown RBP4.37□□□□□ -1.71
CDK5RAP3-221ENST00000581662 RNASEKQ6P5S7 137 aaKnown RBP4.37□□□□□ -1.71
CDK5RAP3-221ENST00000581662 OCC1Q8TAD7 63 aa4.37□□□□□ -1.71
CDK5RAP3-221ENST00000581662 URB1-AS1Q96HZ7 61 aa4.37□□□□□ -1.71
CDK5RAP3-221ENST00000581662 PPDPFQ9H3Y8 114 aa4.37□□□□□ -1.71
CDK5RAP3-221ENST00000581662 MANBALQ9NQG1 85 aa4.37□□□□□ -1.71
CDK5RAP3-221ENST00000581662 IGHV3OR16-9A0A0B4J2B5 98 aa4.36□□□□□ -1.71
CDK5RAP3-221ENST00000581662 HMSDA8MTL9 139 aa4.36□□□□□ -1.71
CDK5RAP3-221ENST00000581662 SMKR1H3BMG3 65 aa4.36□□□□□ -1.71
CDK5RAP3-221ENST00000581662 UBE2L6O14933 153 aa4.36□□□□□ -1.71
CDK5RAP3-221ENST00000581662 IFNA1P01562 189 aa4.36□□□□□ -1.71
CDK5RAP3-221ENST00000581662 TLX1NBP0CAT3 122 aa4.36□□□□□ -1.71
CDK5RAP3-221ENST00000581662 SS18Q15532 418 aa4.36□□□□□ -1.71
CDK5RAP3-221ENST00000581662 KRTAP13-2Q52LG2 175 aa4.36□□□□□ -1.71
CDK5RAP3-221ENST00000581662 COMMD7Q86VX2 200 aa4.36□□□□□ -1.71
CDK5RAP3-221ENST00000581662 C2orf48Q96LS8 159 aa4.36□□□□□ -1.71
CDK5RAP3-221ENST00000581662 A0A1B0GV90 55 aa4.35□□□□□ -1.71
CDK5RAP3-221ENST00000581662 I3L3M4 83 aa4.35□□□□□ -1.71
CDK5RAP3-221ENST00000581662 M0R2T5 61 aa4.35□□□□□ -1.71
CDK5RAP3-221ENST00000581662 GNG4P50150 75 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms