RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 TMEM241Q24JQ0 296 aa6.45□□□□□ -1.38
RFFL-209ENST00000581265 FAM74A3Q4VXF1 159 aa6.45□□□□□ -1.38
RFFL-209ENST00000581265 AKAP14Q86UN6 197 aa6.45□□□□□ -1.38
RFFL-209ENST00000581265 A0A1B0GW15 77 aa6.44□□□□□ -1.38
RFFL-209ENST00000581265 SMIM27A0A1W2PRY6 76 aa6.44□□□□□ -1.38
RFFL-209ENST00000581265 TLX1NBP0CAT3 122 aa6.44□□□□□ -1.38
RFFL-209ENST00000581265 CKS2P33552 79 aa6.44□□□□□ -1.38
RFFL-209ENST00000581265 RPL39P62891 51 aaKnown RBP6.44□□□□□ -1.38
RFFL-209ENST00000581265 MRPS36P82909 103 aaKnown RBP6.44□□□□□ -1.38
RFFL-209ENST00000581265 ORAOV1Q8WV07 137 aa6.44□□□□□ -1.38
RFFL-209ENST00000581265 DIRC1Q969H9 104 aa6.44□□□□□ -1.38
RFFL-209ENST00000581265 SPANXA1Q9NS26 97 aa6.44□□□□□ -1.38
RFFL-209ENST00000581265 A0A087WZ39 114 aa6.43□□□□□ -1.38
RFFL-209ENST00000581265 NDUFA1O15239 70 aa6.43□□□□□ -1.38
RFFL-209ENST00000581265 TNFRSF6BO95407 300 aa6.43□□□□□ -1.38
RFFL-209ENST00000581265 RPL23P62829 140 aaKnown RBP6.43□□□□□ -1.38
RFFL-209ENST00000581265 C10orf25Q5T742 122 aa6.43□□□□□ -1.38
RFFL-209ENST00000581265 PRR26Q8N8Z3 221 aa6.43□□□□□ -1.38
RFFL-209ENST00000581265 FAM168BA1KXE4 195 aa6.42□□□□□ -1.38
RFFL-209ENST00000581265 UNQ6190/PRO20217Q6UXQ8 127 aa6.42□□□□□ -1.38
RFFL-209ENST00000581265 KRTAP11-1Q8IUC1 163 aa6.42□□□□□ -1.38
RFFL-209ENST00000581265 SMIM2Q9BVW6 85 aa6.42□□□□□ -1.38
RFFL-209ENST00000581265 H0Y9J4 135 aa6.41□□□□□ -1.38
RFFL-209ENST00000581265 HBBP68871 147 aa6.41□□□□□ -1.38
RFFL-209ENST00000581265 C6orf48Q9UBA6 75 aa6.41□□□□□ -1.38
RFFL-209ENST00000581265 NAT8Q9UHE5 227 aa6.41□□□□□ -1.38
RFFL-209ENST00000581265 IGLV1-50A0A075B6I6 118 aa6.4□□□□□ -1.38
RFFL-209ENST00000581265 IFITM10A6NMD0 228 aa6.4□□□□□ -1.38
RFFL-209ENST00000581265 C9JQL5 133 aa6.4□□□□□ -1.38
RFFL-209ENST00000581265 D6R8Y8 96 aa6.4□□□□□ -1.38
RFFL-209ENST00000581265 F8W036 122 aa6.4□□□□□ -1.38
RFFL-209ENST00000581265 PPBPP02775 128 aa6.4□□□□□ -1.38
RFFL-209ENST00000581265 KIAA0087Q14695 138 aa6.4□□□□□ -1.38
RFFL-209ENST00000581265 ADIRFQ15847 76 aa6.4□□□□□ -1.38
RFFL-209ENST00000581265 KRTAP7-1Q8IUC3 87 aa6.4□□□□□ -1.38
RFFL-209ENST00000581265 SMDT1Q9H4I9 107 aa6.4□□□□□ -1.38
RFFL-209ENST00000581265 A0A1B0GXF2 115 aa6.39□□□□□ -1.39
RFFL-209ENST00000581265 NPYP01303 97 aa6.39□□□□□ -1.39
RFFL-209ENST00000581265 S100A8P05109 93 aa6.39□□□□□ -1.39
RFFL-209ENST00000581265 KRTAP1-4P0C5Y4 121 aa6.39□□□□□ -1.39
RFFL-209ENST00000581265 GAGE2EQ4V326 116 aa6.39□□□□□ -1.39
RFFL-209ENST00000581265 GAGE2DQ9UEU5 116 aa6.39□□□□□ -1.39
RFFL-209ENST00000581265 PYGO1Q9Y3Y4 419 aa6.39□□□□□ -1.39
RFFL-209ENST00000581265 LPAP08519 4548 aa6.38□□□□□ -1.39
RFFL-209ENST00000581265 TGIF2-C20orf24A0A0A6YYL0 155 aa6.38□□□□□ -1.39
RFFL-209ENST00000581265 TRBV30A0A0K0K1B3 111 aa6.38□□□□□ -1.39
RFFL-209ENST00000581265 LINC00242Q5T6M2 205 aa6.38□□□□□ -1.39
RFFL-209ENST00000581265 MRPL54Q6P161 138 aaKnown RBP6.38□□□□□ -1.39
RFFL-209ENST00000581265 FAM19A5Q7Z5A7 132 aaPredicted RBP6.38□□□□□ -1.39
RFFL-209ENST00000581265 KRTAP3-3Q9BYR6 98 aa6.38□□□□□ -1.39
RFFL-209ENST00000581265 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
RFFL-209ENST00000581265 hCG_2014768A0A024R1R8 64 aa6.37□□□□□ -1.39
RFFL-209ENST00000581265 NDUFC2-KCTD14E9PQ53 114 aa6.37□□□□□ -1.39
RFFL-209ENST00000581265 RAB5AP20339 215 aa6.37□□□□□ -1.39
RFFL-209ENST00000581265 IFI27P40305 119 aaPredicted RBP6.37□□□□□ -1.39
RFFL-209ENST00000581265 SRSF3P84103 164 aaKnown RBP6.37□□□□□ -1.39
RFFL-209ENST00000581265 ORMDL3Q8N138 153 aa6.37□□□□□ -1.39
RFFL-209ENST00000581265 LINC01561Q8N1V8 128 aa6.37□□□□□ -1.39
RFFL-209ENST00000581265 FAT4Q6V0I7 4981 aa6.36□□□□□ -1.39
RFFL-209ENST00000581265 IGLV4-3A0A075B6K6 122 aa6.36□□□□□ -1.39
RFFL-209ENST00000581265 PRSS47A8MTI9 375 aa6.36□□□□□ -1.39
RFFL-209ENST00000581265 M0QXV9 152 aa6.36□□□□□ -1.39
RFFL-209ENST00000581265 PEA15Q15121 130 aa6.36□□□□□ -1.39
RFFL-209ENST00000581265 C2orf82Q6UX34 121 aa6.36□□□□□ -1.39
RFFL-209ENST00000581265 TMEM136Q6ZRR5 245 aa6.36□□□□□ -1.39
RFFL-209ENST00000581265 RPL13AP40429 203 aaKnown RBP6.35□□□□□ -1.39
RFFL-209ENST00000581265 UBE2BP63146 152 aa6.35□□□□□ -1.39
RFFL-209ENST00000581265 C9orf129Q5T035 196 aaKnown RBP6.35□□□□□ -1.39
RFFL-209ENST00000581265 TMEM141Q96I45 108 aa6.35□□□□□ -1.39
RFFL-209ENST00000581265 PACRGQ96M98 296 aaPredicted RBP6.35□□□□□ -1.39
RFFL-209ENST00000581265 PRELID3AQ96N28 172 aa6.35□□□□□ -1.39
RFFL-209ENST00000581265 UBE2D1P51668 147 aa6.34□□□□□ -1.39
RFFL-209ENST00000581265 TEX43Q6ZNM6 134 aa6.34□□□□□ -1.39
RFFL-209ENST00000581265 ATP5L2Q7Z4Y8 100 aa6.34□□□□□ -1.39
RFFL-209ENST00000581265 CARHSP1Q9Y2V2 147 aaKnown RBP6.34□□□□□ -1.39
RFFL-209ENST00000581265 ZNF861PO60384 105 aa6.33□□□□□ -1.4
RFFL-209ENST00000581265 LAMTOR2Q9Y2Q5 125 aa6.33□□□□□ -1.4
RFFL-209ENST00000581265 PRR4Q16378 134 aa6.32□□□□□ -1.4
RFFL-209ENST00000581265 LCE2AQ5TA79 106 aaPredicted RBP6.32□□□□□ -1.4
RFFL-209ENST00000581265 C2orf66Q6UXQ4 117 aa6.32□□□□□ -1.4
RFFL-209ENST00000581265 Q6ZN92 141 aa6.32□□□□□ -1.4
RFFL-209ENST00000581265 AMELXQ99217 191 aa6.32□□□□□ -1.4
RFFL-209ENST00000581265 C2orf88Q9BSF0 95 aa6.32□□□□□ -1.4
RFFL-209ENST00000581265 VCX2Q9H322 139 aa6.32□□□□□ -1.4
RFFL-209ENST00000581265 CYSLTR1Q9Y271 337 aa6.32□□□□□ -1.4
RFFL-209ENST00000581265 LOC389332A0A1B0GUA5 103 aa6.31□□□□□ -1.4
RFFL-209ENST00000581265 NPSP0C0P6 89 aa6.31□□□□□ -1.4
RFFL-209ENST00000581265 CKS1BP61024 79 aa6.31□□□□□ -1.4
RFFL-209ENST00000581265 C6orf226Q5I0X4 101 aa6.31□□□□□ -1.4
RFFL-209ENST00000581265 LINC00173Q6ZV60 143 aa6.31□□□□□ -1.4
RFFL-209ENST00000581265 FAM19A3Q7Z5A8 133 aa6.31□□□□□ -1.4
RFFL-209ENST00000581265 Q8N8P6 123 aa6.31□□□□□ -1.4
RFFL-209ENST00000581265 C22orf24Q9Y442 160 aa6.31□□□□□ -1.4
RFFL-209ENST00000581265 MUC2Q02817 5179 aa6.3□□□□□ -1.4
RFFL-209ENST00000581265 IGIPA6NJ69 53 aa6.3□□□□□ -1.4
RFFL-209ENST00000581265 K7EMI3 77 aa6.3□□□□□ -1.4
RFFL-209ENST00000581265 NUPR1O60356 82 aa6.3□□□□□ -1.4
RFFL-209ENST00000581265 PRSS2P07478 247 aa6.3□□□□□ -1.4
RFFL-209ENST00000581265 LBHQ53QV2 105 aaPredicted RBP6.3□□□□□ -1.4
RFFL-209ENST00000581265 ZC2HC1BQ5TFG8 222 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms