RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 MT-ND6P03923 174 aa8.48□□□□□ -1.05
NUP85-215ENST00000580879 INAFM2P0DMQ5 153 aa8.48□□□□□ -1.05
NUP85-215ENST00000580879 COX6A2Q02221 97 aa8.48□□□□□ -1.05
NUP85-215ENST00000580879 COX19Q49B96 90 aa8.48□□□□□ -1.05
NUP85-215ENST00000580879 PRSS3P2Q8NHM4 247 aa8.48□□□□□ -1.05
NUP85-215ENST00000580879 TMEM141Q96I45 108 aa8.48□□□□□ -1.05
NUP85-215ENST00000580879 IGLV4-69A0A075B6H9 119 aa8.47□□□□□ -1.05
NUP85-215ENST00000580879 K7EMI3 77 aa8.47□□□□□ -1.05
NUP85-215ENST00000580879 DPH3Q96FX2 82 aa8.47□□□□□ -1.05
NUP85-215ENST00000580879 CARD19Q96LW7 228 aa8.47□□□□□ -1.05
NUP85-215ENST00000580879 IGHV3OR16-9A0A0B4J2B5 98 aa8.46□□□□□ -1.06
NUP85-215ENST00000580879 IGKV2-24A0A0C4DH68 120 aa8.46□□□□□ -1.06
NUP85-215ENST00000580879 IGIPA6NJ69 53 aa8.46□□□□□ -1.06
NUP85-215ENST00000580879 SYCNQ0VAF6 134 aa8.46□□□□□ -1.06
NUP85-215ENST00000580879 TEX43Q6ZNM6 134 aa8.46□□□□□ -1.06
NUP85-215ENST00000580879 LINC00173Q6ZV60 143 aa8.46□□□□□ -1.06
NUP85-215ENST00000580879 TRAPPC1Q9Y5R8 145 aa8.46□□□□□ -1.06
NUP85-215ENST00000580879 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.06
NUP85-215ENST00000580879 APOMO95445 188 aa8.45□□□□□ -1.06
NUP85-215ENST00000580879 SPAG11BQ08648 103 aa8.45□□□□□ -1.06
NUP85-215ENST00000580879 CIRBPQ14011 172 aaKnown RBP8.45□□□□□ -1.06
NUP85-215ENST00000580879 LINC00242Q5T6M2 205 aa8.45□□□□□ -1.06
NUP85-215ENST00000580879 Q6ZN92 141 aa8.45□□□□□ -1.06
NUP85-215ENST00000580879 SLC7A5P1Q8MH63 180 aa8.45□□□□□ -1.06
NUP85-215ENST00000580879 ORAOV1Q8WV07 137 aa8.45□□□□□ -1.06
NUP85-215ENST00000580879 VCX2Q9H322 139 aa8.45□□□□□ -1.06
NUP85-215ENST00000580879 MYCBP2O75592 4640 aa8.44□□□□□ -1.06
NUP85-215ENST00000580879 PLA2G1BP04054 148 aaKnown RBP8.44□□□□□ -1.06
NUP85-215ENST00000580879 UBE2D1P51668 147 aa8.44□□□□□ -1.06
NUP85-215ENST00000580879 Q6ZRU5 148 aa8.44□□□□□ -1.06
NUP85-215ENST00000580879 FA2HQ7L5A8 372 aa8.44□□□□□ -1.06
NUP85-215ENST00000580879 SPACA4Q8TDM5 124 aa8.44□□□□□ -1.06
NUP85-215ENST00000580879 TOMM6Q96B49 74 aa8.44□□□□□ -1.06
NUP85-215ENST00000580879 CAMK2N2Q96S95 79 aa8.44□□□□□ -1.06
NUP85-215ENST00000580879 AMELXQ99217 191 aa8.44□□□□□ -1.06
NUP85-215ENST00000580879 C2orf88Q9BSF0 95 aa8.44□□□□□ -1.06
NUP85-215ENST00000580879 A0A087WYN8 130 aa8.43□□□□□ -1.06
NUP85-215ENST00000580879 A0A096LNI7 61 aa8.43□□□□□ -1.06
NUP85-215ENST00000580879 MAJINQ3KP22 176 aa8.43□□□□□ -1.06
NUP85-215ENST00000580879 LINC01546A6NGU7 62 aa8.42□□□□□ -1.06
NUP85-215ENST00000580879 G0S2P27469 103 aa8.42□□□□□ -1.06
NUP85-215ENST00000580879 CBLN2Q8IUK8 224 aa8.42□□□□□ -1.06
NUP85-215ENST00000580879 OR10D4PQ8NGN7 298 aa8.42□□□□□ -1.06
NUP85-215ENST00000580879 YPEL4Q96NS1 127 aa8.42□□□□□ -1.06
NUP85-215ENST00000580879 SCGB3A1Q96QR1 104 aa8.42□□□□□ -1.06
NUP85-215ENST00000580879 TIMM17AQ99595 171 aa8.42□□□□□ -1.06
NUP85-215ENST00000580879 SMCO4Q9NRQ5 59 aa8.42□□□□□ -1.06
NUP85-215ENST00000580879 A0A087WZ39 114 aa8.41□□□□□ -1.06
NUP85-215ENST00000580879 A0A0J9YXV3 536 aa8.41□□□□□ -1.06
NUP85-215ENST00000580879 NPSP0C0P6 89 aa8.41□□□□□ -1.06
NUP85-215ENST00000580879 C2orf48Q96LS8 159 aa8.41□□□□□ -1.06
NUP85-215ENST00000580879 KRTAP10-4P60372 401 aaPredicted RBP8.4□□□□□ -1.06
NUP85-215ENST00000580879 RPL37AP61513 92 aaKnown RBP8.4□□□□□ -1.06
NUP85-215ENST00000580879 ERASQ7Z444 233 aa8.4□□□□□ -1.06
NUP85-215ENST00000580879 C18orf32Q8TCD1 76 aa8.4□□□□□ -1.06
NUP85-215ENST00000580879 URB1-AS1Q96HZ7 61 aa8.4□□□□□ -1.06
NUP85-215ENST00000580879 GAGE2BQ13066 116 aa8.39□□□□□ -1.07
NUP85-215ENST00000580879 PAPPA-AS1Q5QFB9 102 aa8.39□□□□□ -1.07
NUP85-215ENST00000580879 STPG4Q8N801 248 aa8.39□□□□□ -1.07
NUP85-215ENST00000580879 PLAC8Q9NZF1 115 aa8.39□□□□□ -1.07
NUP85-215ENST00000580879 LOC107984640A0A0U1RRK4 108 aa8.38□□□□□ -1.07
NUP85-215ENST00000580879 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.38□□□□□ -1.07
NUP85-215ENST00000580879 PMCHL1Q16048 86 aa8.38□□□□□ -1.07
NUP85-215ENST00000580879 C10orf25Q5T742 122 aa8.38□□□□□ -1.07
NUP85-215ENST00000580879 UNQ6190/PRO20217Q6UXQ8 127 aa8.38□□□□□ -1.07
NUP85-215ENST00000580879 A0A096LNJ9 63 aa8.37□□□□□ -1.07
NUP85-215ENST00000580879 NDUFA1O15239 70 aa8.37□□□□□ -1.07
NUP85-215ENST00000580879 PTTG1IPP53801 180 aa8.37□□□□□ -1.07
NUP85-215ENST00000580879 RPL18AQ02543 176 aaKnown RBP8.37□□□□□ -1.07
NUP85-215ENST00000580879 KIAA0087Q14695 138 aa8.37□□□□□ -1.07
NUP85-215ENST00000580879 FAM19A3Q7Z5A8 133 aa8.37□□□□□ -1.07
NUP85-215ENST00000580879 CDKN2A-AS1Q9UH64 79 aa8.37□□□□□ -1.07
NUP85-215ENST00000580879 PKIGQ9Y2B9 76 aa8.37□□□□□ -1.07
NUP85-215ENST00000580879 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
NUP85-215ENST00000580879 LINC00614P0C842 121 aa8.36□□□□□ -1.07
NUP85-215ENST00000580879 HERVK_113P63121 156 aa8.36□□□□□ -1.07
NUP85-215ENST00000580879 C2orf82Q6UX34 121 aa8.36□□□□□ -1.07
NUP85-215ENST00000580879 GEMIN7Q9H840 131 aaKnown RBP8.36□□□□□ -1.07
NUP85-215ENST00000580879 MRPL35Q9NZE8 188 aaKnown RBP8.36□□□□□ -1.07
NUP85-215ENST00000580879 TOMM7Q9P0U1 55 aa8.36□□□□□ -1.07
NUP85-215ENST00000580879 LINC00474Q9P2X8 69 aa8.36□□□□□ -1.07
NUP85-215ENST00000580879 LINC01549A6NIU2 74 aa8.35□□□□□ -1.07
NUP85-215ENST00000580879 CST9LQ9H4G1 147 aa8.35□□□□□ -1.07
NUP85-215ENST00000580879 C6orf48Q9UBA6 75 aa8.35□□□□□ -1.07
NUP85-215ENST00000580879 HERC1Q15751 4861 aa8.34□□□□□ -1.07
NUP85-215ENST00000580879 HNRNPA3P51991 378 aaKnown RBP8.34□□□□□ -1.07
NUP85-215ENST00000580879 SEC11AP67812 179 aa8.34□□□□□ -1.07
NUP85-215ENST00000580879 RNF151Q2KHN1 245 aa8.34□□□□□ -1.07
NUP85-215ENST00000580879 LINC01561Q8N1V8 128 aa8.34□□□□□ -1.07
NUP85-215ENST00000580879 LINC00469Q8N7U9 141 aa8.34□□□□□ -1.07
NUP85-215ENST00000580879 DMBT1Q9UGM3 2413 aaPredicted RBP8.34□□□□□ -1.07
NUP85-215ENST00000580879 F8WDY8 70 aa8.33□□□□□ -1.08
NUP85-215ENST00000580879 HBDP02042 147 aa8.33□□□□□ -1.08
NUP85-215ENST00000580879 PRSS2P07478 247 aa8.33□□□□□ -1.08
NUP85-215ENST00000580879 NDUFA6P56556 154 aa8.33□□□□□ -1.08
NUP85-215ENST00000580879 PMVKQ15126 192 aa8.33□□□□□ -1.08
NUP85-215ENST00000580879 C7orf33Q8WU49 177 aa8.33□□□□□ -1.08
NUP85-215ENST00000580879 PACRGQ96M98 296 aaPredicted RBP8.33□□□□□ -1.08
NUP85-215ENST00000580879 LRP1Q07954 4544 aaKnown RBP8.33□□□□□ -1.08
NUP85-215ENST00000580879 TINCRA0A1B0GVN0 87 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms