RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 GKN2Q86XP6 184 aa1.73□□□□□ -2.13
KPNB1-208ENST00000580019 PLPP5Q8NEB5 264 aa1.73□□□□□ -2.13
KPNB1-208ENST00000580019 VSTM2AQ8TAG5 236 aa1.73□□□□□ -2.13
KPNB1-208ENST00000580019 ZNF431Q8TF32 576 aaPredicted RBP1.73□□□□□ -2.13
KPNB1-208ENST00000580019 SFT2D1Q8WV19 159 aa1.73□□□□□ -2.13
KPNB1-208ENST00000580019 MRPL57Q9BQC6 102 aaKnown RBP1.73□□□□□ -2.13
KPNB1-208ENST00000580019 SEC11CQ9BY50 192 aa1.73□□□□□ -2.13
KPNB1-208ENST00000580019 AGPAT4-IT1Q9H0P7 198 aa1.73□□□□□ -2.13
KPNB1-208ENST00000580019 TAS2R8Q9NYW2 309 aa1.73□□□□□ -2.13
KPNB1-208ENST00000580019 CHCHD2Q9Y6H1 151 aaPredicted RBP1.73□□□□□ -2.13
KPNB1-208ENST00000580019 SERP1Q9Y6X1 66 aa1.73□□□□□ -2.13
KPNB1-208ENST00000580019 KIAA2026Q5HYC2 2103 aa1.73□□□□□ -2.13
KPNB1-208ENST00000580019 IGKV3D-11A0A0A0MRZ8 115 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 IGKV2-24A0A0C4DH68 120 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 LOC107984156A0A0G2JMH3 177 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 PVALEFA0A1B0GWK0 134 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 APOC4-APOC2K7ER74 178 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 GEMIN2O14893 280 aaKnown RBP1.72□□□□□ -2.13
KPNB1-208ENST00000580019 CCL25O15444 150 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 KLF7O75840 302 aaPredicted RBP1.72□□□□□ -2.13
KPNB1-208ENST00000580019 APOC2P02655 101 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 LINC00315P59091 139 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 KRTAP13-2Q52LG2 175 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 MIC13Q5XKP0 118 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 Q6AWC8 147 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 ARL17AQ8IVW1 177 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 LINC00269Q8N2A0 174 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 SVBPQ8N300 66 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 TENM2Q9NT68 2774 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 PLECQ15149 4684 aaKnown RBP1.72□□□□□ -2.13
KPNB1-208ENST00000580019 FREM1Q5H8C1 2179 aa1.72□□□□□ -2.13
KPNB1-208ENST00000580019 KIAA1549Q9HCM3 1950 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 TRAV2A0A0B4J234 112 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 MCRIP1C9JLW8 97 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 E7EQL1 145 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 PIN1P1O15428 100 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 PITX3O75364 302 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 IGKV3-11P04433 115 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 CATR1Q13166 79 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 C9orf153Q5TBE3 101 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 OR2T2Q6IF00 324 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 FAM19A2Q8N3H0 131 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 C4orf3Q8WVX3 66 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 SPTSSAQ969W0 71 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 TVP23CQ96ET8 276 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 MPDZO75970 2070 aa1.71□□□□□ -2.14
KPNB1-208ENST00000580019 COL7A1Q02388 2944 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 FRAS1Q86XX4 4008 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 DNAH10Q8IVF4 4471 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 C2orf70A6NJV1 201 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 PIPP12273 146 aaPredicted RBP1.7□□□□□ -2.14
KPNB1-208ENST00000580019 ADCYAP1P18509 176 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 BRS3P32247 399 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 PDE6HQ13956 83 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 COL5A1-AS1Q5SY13 56 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 NCMAPQ5T1S8 102 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 C6orf52Q5T4I8 152 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 C12orf73Q69YU5 71 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 IGFL1Q6UW32 110 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 ZNF833PQ6ZTB9 187 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 CLECL1Q8IZS7 167 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 LYPD1Q8N2G4 141 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 C9orf163Q8N9P6 203 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 TIMM21Q9BVV7 248 aa1.7□□□□□ -2.14
KPNB1-208ENST00000580019 CSMD3Q7Z407 3707 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 MUC4Q99102 2169 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 PIGBOS1A0A0B4J2F0 54 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 A0A1W2PNN7 141 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 SNCGO76070 127 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 NDUFB6O95139 128 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 STATHP02808 62 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 IL5P05113 134 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 SPINK8P0C7L1 97 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 IFITM1P13164 125 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 SPANXN1Q5VSR9 72 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 FOXI2Q6ZQN5 318 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 SLC25A26Q70HW3 274 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 DYNLRB2Q8TF09 96 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 PATE1Q8WXA2 126 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 LINC00526Q96FQ7 95 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 LINC00167Q96N53 147 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 AQP10Q96PS8 301 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 CCL19Q99731 98 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 CR1P17927 2039 aa1.69□□□□□ -2.14
KPNB1-208ENST00000580019 TRAV14DV4A0A0A6YYC5 116 aa1.68□□□□□ -2.14
KPNB1-208ENST00000580019 TRAV17A0A0B4J275 112 aa1.68□□□□□ -2.14
KPNB1-208ENST00000580019 A0A0G2JQZ4 141 aa1.68□□□□□ -2.14
KPNB1-208ENST00000580019 S100A10P60903 97 aa1.68□□□□□ -2.14
KPNB1-208ENST00000580019 NPC2P61916 151 aa1.68□□□□□ -2.14
KPNB1-208ENST00000580019 TTC9CQ8N5M4 171 aa1.68□□□□□ -2.14
KPNB1-208ENST00000580019 Q8TAT8 98 aa1.68□□□□□ -2.14
KPNB1-208ENST00000580019 REG4Q9BYZ8 158 aa1.68□□□□□ -2.14
KPNB1-208ENST00000580019 TMEM242Q9NWH2 141 aa1.68□□□□□ -2.14
KPNB1-208ENST00000580019 STAB2Q8WWQ8 2551 aa1.68□□□□□ -2.14
KPNB1-208ENST00000580019 DOCK10Q96BY6 2186 aa1.68□□□□□ -2.14
KPNB1-208ENST00000580019 A0A1W2PRS3 328 aa1.67□□□□□ -2.14
KPNB1-208ENST00000580019 PRB2P02812 416 aaPredicted RBP1.67□□□□□ -2.14
KPNB1-208ENST00000580019 GYPBP06028 91 aa1.67□□□□□ -2.14
KPNB1-208ENST00000580019 MIR22HGQ0VDD5 57 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms