RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 TGIF2-C20orf24A0A0A6YYL0 155 aa9.27□□□□□ -0.93
MKS1-207ENST00000578789 TMEM141Q96I45 108 aa9.27□□□□□ -0.93
MKS1-207ENST00000578789 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.27□□□□□ -0.93
MKS1-207ENST00000578789 IGHV3OR16-9A0A0B4J2B5 98 aa9.26□□□□□ -0.93
MKS1-207ENST00000578789 LINC01546A6NGU7 62 aa9.26□□□□□ -0.93
MKS1-207ENST00000578789 FAM229AH3BQW9 127 aa9.26□□□□□ -0.93
MKS1-207ENST00000578789 IGIPA6NJ69 53 aa9.25□□□□□ -0.93
MKS1-207ENST00000578789 PANO1I0J062 215 aa9.25□□□□□ -0.93
MKS1-207ENST00000578789 MALP21145 153 aa9.25□□□□□ -0.93
MKS1-207ENST00000578789 G0S2P27469 103 aa9.25□□□□□ -0.93
MKS1-207ENST00000578789 FABP9Q0Z7S8 132 aa9.25□□□□□ -0.93
MKS1-207ENST00000578789 TEX43Q6ZNM6 134 aa9.25□□□□□ -0.93
MKS1-207ENST00000578789 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
MKS1-207ENST00000578789 AMELXQ99217 191 aa9.25□□□□□ -0.93
MKS1-207ENST00000578789 ZNF561-AS1K7EIQ3 104 aa9.24□□□□□ -0.93
MKS1-207ENST00000578789 LINC00173Q6ZV60 143 aa9.24□□□□□ -0.93
MKS1-207ENST00000578789 C5orf38Q86SI9 138 aa9.24□□□□□ -0.93
MKS1-207ENST00000578789 PRSS3P2Q8NHM4 247 aa9.24□□□□□ -0.93
MKS1-207ENST00000578789 TOMM6Q96B49 74 aa9.24□□□□□ -0.93
MKS1-207ENST00000578789 LINC00526Q96FQ7 95 aa9.24□□□□□ -0.93
MKS1-207ENST00000578789 APOMO95445 188 aa9.23□□□□□ -0.93
MKS1-207ENST00000578789 UBE2D1P51668 147 aa9.23□□□□□ -0.93
MKS1-207ENST00000578789 LINC00242Q5T6M2 205 aa9.23□□□□□ -0.93
MKS1-207ENST00000578789 Q6ZN92 141 aa9.23□□□□□ -0.93
MKS1-207ENST00000578789 SPACA4Q8TDM5 124 aa9.23□□□□□ -0.93
MKS1-207ENST00000578789 CARD19Q96LW7 228 aa9.23□□□□□ -0.93
MKS1-207ENST00000578789 YPEL4Q96NS1 127 aa9.23□□□□□ -0.93
MKS1-207ENST00000578789 TIMM17AQ99595 171 aa9.23□□□□□ -0.93
MKS1-207ENST00000578789 C2orf88Q9BSF0 95 aa9.23□□□□□ -0.93
MKS1-207ENST00000578789 IGLV4-69A0A075B6H9 119 aa9.22□□□□□ -0.93
MKS1-207ENST00000578789 COX6A2Q02221 97 aa9.22□□□□□ -0.93
MKS1-207ENST00000578789 SYCNQ0VAF6 134 aa9.22□□□□□ -0.93
MKS1-207ENST00000578789 OR10D4PQ8NGN7 298 aa9.22□□□□□ -0.93
MKS1-207ENST00000578789 C2orf48Q96LS8 159 aa9.22□□□□□ -0.93
MKS1-207ENST00000578789 TRAPPC1Q9Y5R8 145 aa9.22□□□□□ -0.93
MKS1-207ENST00000578789 LINC01549A6NIU2 74 aa9.21□□□□□ -0.94
MKS1-207ENST00000578789 PLA2G1BP04054 148 aaKnown RBP9.21□□□□□ -0.94
MKS1-207ENST00000578789 CHTF8P0CG12 524 aa9.21□□□□□ -0.94
MKS1-207ENST00000578789 SPAG11BQ08648 103 aa9.21□□□□□ -0.94
MKS1-207ENST00000578789 PAPPA-AS1Q5QFB9 102 aa9.21□□□□□ -0.94
MKS1-207ENST00000578789 FAM19A3Q7Z5A8 133 aa9.21□□□□□ -0.94
MKS1-207ENST00000578789 VCX2Q9H322 139 aa9.21□□□□□ -0.94
MKS1-207ENST00000578789 PKIGQ9Y2B9 76 aa9.21□□□□□ -0.94
MKS1-207ENST00000578789 A0A087WZ39 114 aa9.2□□□□□ -0.94
MKS1-207ENST00000578789 ZC2HC1BQ5TFG8 222 aa9.2□□□□□ -0.94
MKS1-207ENST00000578789 FA2HQ7L5A8 372 aa9.2□□□□□ -0.94
MKS1-207ENST00000578789 INAFM2P0DMQ5 153 aa9.19□□□□□ -0.94
MKS1-207ENST00000578789 Q6ZRU5 148 aa9.19□□□□□ -0.94
MKS1-207ENST00000578789 ERASQ7Z444 233 aa9.19□□□□□ -0.94
MKS1-207ENST00000578789 LINC01561Q8N1V8 128 aa9.19□□□□□ -0.94
MKS1-207ENST00000578789 C18orf32Q8TCD1 76 aa9.19□□□□□ -0.94
MKS1-207ENST00000578789 ORAOV1Q8WV07 137 aa9.19□□□□□ -0.94
MKS1-207ENST00000578789 CAMK2N2Q96S95 79 aa9.19□□□□□ -0.94
MKS1-207ENST00000578789 A0A096LNI7 61 aa9.18□□□□□ -0.94
MKS1-207ENST00000578789 F8WDY8 70 aa9.18□□□□□ -0.94
MKS1-207ENST00000578789 KRTAP10-4P60372 401 aaPredicted RBP9.18□□□□□ -0.94
MKS1-207ENST00000578789 SLC7A5P1Q8MH63 180 aa9.18□□□□□ -0.94
MKS1-207ENST00000578789 SCGB3A1Q96QR1 104 aa9.18□□□□□ -0.94
MKS1-207ENST00000578789 SMCO4Q9NRQ5 59 aa9.18□□□□□ -0.94
MKS1-207ENST00000578789 A0A087WYN8 130 aa9.17□□□□□ -0.94
MKS1-207ENST00000578789 C4orf48Q5BLP8 95 aa9.17□□□□□ -0.94
MKS1-207ENST00000578789 URB1-AS1Q96HZ7 61 aa9.17□□□□□ -0.94
MKS1-207ENST00000578789 PLAC8Q9NZF1 115 aa9.17□□□□□ -0.94
MKS1-207ENST00000578789 SRRM2Q9UQ35 2752 aaKnown RBP9.17□□□□□ -0.94
MKS1-207ENST00000578789 IGKV2-24A0A0C4DH68 120 aa9.16□□□□□ -0.94
MKS1-207ENST00000578789 SEC11AP67812 179 aa9.16□□□□□ -0.94
MKS1-207ENST00000578789 RNF151Q2KHN1 245 aa9.16□□□□□ -0.94
MKS1-207ENST00000578789 CBLN2Q8IUK8 224 aa9.16□□□□□ -0.94
MKS1-207ENST00000578789 LINC00474Q9P2X8 69 aa9.16□□□□□ -0.94
MKS1-207ENST00000578789 A0A096LNJ9 63 aa9.15□□□□□ -0.94
MKS1-207ENST00000578789 LOC107984640A0A0U1RRK4 108 aa9.15□□□□□ -0.94
MKS1-207ENST00000578789 HERVK_113P63121 156 aa9.15□□□□□ -0.94
MKS1-207ENST00000578789 KIAA0087Q14695 138 aa9.15□□□□□ -0.94
MKS1-207ENST00000578789 MAJINQ3KP22 176 aa9.15□□□□□ -0.94
MKS1-207ENST00000578789 MRPL35Q9NZE8 188 aaKnown RBP9.15□□□□□ -0.94
MKS1-207ENST00000578789 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.14□□□□□ -0.95
MKS1-207ENST00000578789 NDUFA1O15239 70 aa9.14□□□□□ -0.95
MKS1-207ENST00000578789 LORP23490 312 aaPredicted RBP9.14□□□□□ -0.95
MKS1-207ENST00000578789 LINC00614P0C842 121 aa9.13□□□□□ -0.95
MKS1-207ENST00000578789 PTTG1IPP53801 180 aa9.13□□□□□ -0.95
MKS1-207ENST00000578789 RPL37AP61513 92 aaKnown RBP9.13□□□□□ -0.95
MKS1-207ENST00000578789 DPH3Q96FX2 82 aa9.13□□□□□ -0.95
MKS1-207ENST00000578789 A0A0J9YXV3 536 aa9.12□□□□□ -0.95
MKS1-207ENST00000578789 RAB5BP61020 215 aa9.12□□□□□ -0.95
MKS1-207ENST00000578789 STPG4Q8N801 248 aa9.12□□□□□ -0.95
MKS1-207ENST00000578789 TINCRA0A1B0GVN0 87 aa9.11□□□□□ -0.95
MKS1-207ENST00000578789 HBDP02042 147 aa9.11□□□□□ -0.95
MKS1-207ENST00000578789 PMVKQ15126 192 aa9.11□□□□□ -0.95
MKS1-207ENST00000578789 C10orf25Q5T742 122 aa9.11□□□□□ -0.95
MKS1-207ENST00000578789 CST9LQ9H4G1 147 aa9.11□□□□□ -0.95
MKS1-207ENST00000578789 GEMIN7Q9H840 131 aaKnown RBP9.11□□□□□ -0.95
MKS1-207ENST00000578789 C6orf48Q9UBA6 75 aa9.11□□□□□ -0.95
MKS1-207ENST00000578789 CDKN2A-AS1Q9UH64 79 aa9.11□□□□□ -0.95
MKS1-207ENST00000578789 IGLV5-45A0A087WSX0 123 aa9.1□□□□□ -0.95
MKS1-207ENST00000578789 TLX1NBP0CAT3 122 aa9.1□□□□□ -0.95
MKS1-207ENST00000578789 GAGE2BQ13066 116 aa9.1□□□□□ -0.95
MKS1-207ENST00000578789 PDZD11Q5EBL8 140 aa9.1□□□□□ -0.95
MKS1-207ENST00000578789 UNQ6190/PRO20217Q6UXQ8 127 aa9.1□□□□□ -0.95
MKS1-207ENST00000578789 Q8IZM0 81 aa9.1□□□□□ -0.95
MKS1-207ENST00000578789 FLG2Q5D862 2391 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms