RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 RPL39P62891 51 aaKnown RBP8.08□□□□□ -1.12
UPF3AP2-202ENST00000578315 CT83Q5H943 113 aa8.08□□□□□ -1.12
UPF3AP2-202ENST00000578315 SMDT1Q9H4I9 107 aa8.08□□□□□ -1.12
UPF3AP2-202ENST00000578315 IGHV3OR16-9A0A0B4J2B5 98 aa8.07□□□□□ -1.12
UPF3AP2-202ENST00000578315 TMEM241Q24JQ0 296 aa8.07□□□□□ -1.12
UPF3AP2-202ENST00000578315 TIMM21Q9BVV7 248 aa8.07□□□□□ -1.12
UPF3AP2-202ENST00000578315 F8WDY8 70 aa8.06□□□□□ -1.12
UPF3AP2-202ENST00000578315 FAM104AQ969W3 186 aa8.06□□□□□ -1.12
UPF3AP2-202ENST00000578315 TMEM18Q96B42 140 aa8.06□□□□□ -1.12
UPF3AP2-202ENST00000578315 CARHSP1Q9Y2V2 147 aaKnown RBP8.06□□□□□ -1.12
UPF3AP2-202ENST00000578315 IFITM10A6NMD0 228 aa8.04□□□□□ -1.12
UPF3AP2-202ENST00000578315 TMEM250H0YL14 139 aa8.04□□□□□ -1.12
UPF3AP2-202ENST00000578315 ZNF861PO60384 105 aa8.04□□□□□ -1.12
UPF3AP2-202ENST00000578315 PPP1R17O96001 155 aa8.04□□□□□ -1.12
UPF3AP2-202ENST00000578315 RIGQ13278 110 aa8.04□□□□□ -1.12
UPF3AP2-202ENST00000578315 MRPL51Q4U2R6 128 aaKnown RBP8.04□□□□□ -1.12
UPF3AP2-202ENST00000578315 C9orf129Q5T035 196 aaKnown RBP8.04□□□□□ -1.12
UPF3AP2-202ENST00000578315 C2orf82Q6UX34 121 aa8.04□□□□□ -1.12
UPF3AP2-202ENST00000578315 PPP1R2P9O14990 202 aa8.03□□□□□ -1.12
UPF3AP2-202ENST00000578315 KIAA0087Q14695 138 aa8.03□□□□□ -1.12
UPF3AP2-202ENST00000578315 A0A087X002 238 aa8.02□□□□□ -1.13
UPF3AP2-202ENST00000578315 HBBP68871 147 aa8.02□□□□□ -1.13
UPF3AP2-202ENST00000578315 LINC01551Q86U37 167 aa8.02□□□□□ -1.13
UPF3AP2-202ENST00000578315 TGIF2-C20orf24A0A0A6YYL0 155 aa8.01□□□□□ -1.13
UPF3AP2-202ENST00000578315 NDUFC2-KCTD14E9PQ53 114 aa8.01□□□□□ -1.13
UPF3AP2-202ENST00000578315 SLC51BQ86UW2 128 aa8.01□□□□□ -1.13
UPF3AP2-202ENST00000578315 SMIM7Q9BQ49 75 aa8.01□□□□□ -1.13
UPF3AP2-202ENST00000578315 OSTCQ9NRP0 149 aa8.01□□□□□ -1.13
UPF3AP2-202ENST00000578315 SPANXA1Q9NS26 97 aa8.01□□□□□ -1.13
UPF3AP2-202ENST00000578315 TRBV30A0A0K0K1B3 111 aa8□□□□□ -1.13
UPF3AP2-202ENST00000578315 MRPS36P82909 103 aaKnown RBP8□□□□□ -1.13
UPF3AP2-202ENST00000578315 FAM104BQ5XKR9 115 aa8□□□□□ -1.13
UPF3AP2-202ENST00000578315 LINC00469Q8N7U9 141 aa8□□□□□ -1.13
UPF3AP2-202ENST00000578315 PACRGQ96M98 296 aaPredicted RBP8□□□□□ -1.13
UPF3AP2-202ENST00000578315 RETNLBQ9BQ08 111 aa8□□□□□ -1.13
UPF3AP2-202ENST00000578315 CTDSP1Q9GZU7 261 aa8□□□□□ -1.13
UPF3AP2-202ENST00000578315 V9GYV3 84 aa8□□□□□ -1.13
UPF3AP2-202ENST00000578315 TCAPO15273 167 aa7.99□□□□□ -1.13
UPF3AP2-202ENST00000578315 CKS2P33552 79 aa7.99□□□□□ -1.13
UPF3AP2-202ENST00000578315 TYMSOSQ8TAI1 123 aa7.99□□□□□ -1.13
UPF3AP2-202ENST00000578315 C20orf78Q9BR46 151 aa7.99□□□□□ -1.13
UPF3AP2-202ENST00000578315 C22orf24Q9Y442 160 aa7.99□□□□□ -1.13
UPF3AP2-202ENST00000578315 ZNF727A8MUV8 499 aa7.98□□□□□ -1.13
UPF3AP2-202ENST00000578315 TNFRSF6BO95407 300 aa7.98□□□□□ -1.13
UPF3AP2-202ENST00000578315 SMIM2Q9BVW6 85 aa7.98□□□□□ -1.13
UPF3AP2-202ENST00000578315 TRBV24-1A0A075B6N3 115 aa7.97□□□□□ -1.13
UPF3AP2-202ENST00000578315 LINC00862A6NCI5 91 aa7.97□□□□□ -1.13
UPF3AP2-202ENST00000578315 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
UPF3AP2-202ENST00000578315 EIF5A2Q9GZV4 153 aaKnown RBP7.97□□□□□ -1.13
UPF3AP2-202ENST00000578315 XAGE1AQ9HD64 81 aa7.97□□□□□ -1.13
UPF3AP2-202ENST00000578315 ANAPC11Q9NYG5 84 aa7.97□□□□□ -1.13
UPF3AP2-202ENST00000578315 NAT8BQ9UHF3 227 aa7.97□□□□□ -1.13
UPF3AP2-202ENST00000578315 MUC17Q685J3 4493 aa7.97□□□□□ -1.13
UPF3AP2-202ENST00000578315 NUPR1O60356 82 aa7.96□□□□□ -1.14
UPF3AP2-202ENST00000578315 CRYGAP11844 174 aa7.96□□□□□ -1.14
UPF3AP2-202ENST00000578315 RPL32P62910 135 aaKnown RBP7.96□□□□□ -1.14
UPF3AP2-202ENST00000578315 BLOC1S1P78537 153 aa7.96□□□□□ -1.14
UPF3AP2-202ENST00000578315 ALKAL2Q6UX46 152 aa7.96□□□□□ -1.14
UPF3AP2-202ENST00000578315 D6R8Y8 96 aa7.95□□□□□ -1.14
UPF3AP2-202ENST00000578315 NPYP01303 97 aa7.95□□□□□ -1.14
UPF3AP2-202ENST00000578315 TOMM7Q9P0U1 55 aa7.95□□□□□ -1.14
UPF3AP2-202ENST00000578315 IGLV4-3A0A075B6K6 122 aa7.94□□□□□ -1.14
UPF3AP2-202ENST00000578315 IFI27P40305 119 aaPredicted RBP7.94□□□□□ -1.14
UPF3AP2-202ENST00000578315 RPL28P46779 137 aaKnown RBP7.94□□□□□ -1.14
UPF3AP2-202ENST00000578315 FAM74A3Q4VXF1 159 aa7.94□□□□□ -1.14
UPF3AP2-202ENST00000578315 LBHQ53QV2 105 aaPredicted RBP7.94□□□□□ -1.14
UPF3AP2-202ENST00000578315 CDIP1Q9H305 208 aa7.94□□□□□ -1.14
UPF3AP2-202ENST00000578315 PRSS2P07478 247 aa7.93□□□□□ -1.14
UPF3AP2-202ENST00000578315 SRP19P09132 144 aaKnown RBP7.93□□□□□ -1.14
UPF3AP2-202ENST00000578315 ZC2HC1BQ5TFG8 222 aa7.93□□□□□ -1.14
UPF3AP2-202ENST00000578315 BCE1O60756 84 aa7.92□□□□□ -1.14
UPF3AP2-202ENST00000578315 CKS1BP61024 79 aa7.92□□□□□ -1.14
UPF3AP2-202ENST00000578315 KRTAP13-2Q52LG2 175 aa7.92□□□□□ -1.14
UPF3AP2-202ENST00000578315 TCTE3Q8IZS6 198 aa7.92□□□□□ -1.14
UPF3AP2-202ENST00000578315 TMEM141Q96I45 108 aa7.92□□□□□ -1.14
UPF3AP2-202ENST00000578315 SMIM27A0A1W2PRY6 76 aa7.91□□□□□ -1.14
UPF3AP2-202ENST00000578315 RPL37AP8A6NKH3 93 aa7.91□□□□□ -1.14
UPF3AP2-202ENST00000578315 RAB5AP20339 215 aa7.91□□□□□ -1.14
UPF3AP2-202ENST00000578315 RPL23P62829 140 aaKnown RBP7.91□□□□□ -1.14
UPF3AP2-202ENST00000578315 ADIRFQ15847 76 aa7.91□□□□□ -1.14
UPF3AP2-202ENST00000578315 C6orf226Q5I0X4 101 aa7.91□□□□□ -1.14
UPF3AP2-202ENST00000578315 MRPL54Q6P161 138 aaKnown RBP7.91□□□□□ -1.14
UPF3AP2-202ENST00000578315 MRPL55Q7Z7F7 128 aaKnown RBP7.91□□□□□ -1.14
UPF3AP2-202ENST00000578315 Q6ZN92 141 aa7.9□□□□□ -1.14
UPF3AP2-202ENST00000578315 TEX43Q6ZNM6 134 aa7.9□□□□□ -1.14
UPF3AP2-202ENST00000578315 PYGO1Q9Y3Y4 419 aa7.9□□□□□ -1.14
UPF3AP2-202ENST00000578315 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
UPF3AP2-202ENST00000578315 LINC01561Q8N1V8 128 aa7.89□□□□□ -1.15
UPF3AP2-202ENST00000578315 LINC00304Q8N9R0 145 aa7.89□□□□□ -1.15
UPF3AP2-202ENST00000578315 ALKBH7Q9BT30 221 aaPredicted RBP7.89□□□□□ -1.15
UPF3AP2-202ENST00000578315 A0A1B0GW15 77 aa7.88□□□□□ -1.15
UPF3AP2-202ENST00000578315 GAGE10A6NGK3 116 aa7.88□□□□□ -1.15
UPF3AP2-202ENST00000578315 F8W036 122 aa7.88□□□□□ -1.15
UPF3AP2-202ENST00000578315 LCE2BO14633 110 aa7.88□□□□□ -1.15
UPF3AP2-202ENST00000578315 TPRXLQ17RH7 258 aa7.88□□□□□ -1.15
UPF3AP2-202ENST00000578315 LINC00173Q6ZV60 143 aa7.88□□□□□ -1.15
UPF3AP2-202ENST00000578315 LINC00167Q96N53 147 aa7.88□□□□□ -1.15
UPF3AP2-202ENST00000578315 C2orf88Q9BSF0 95 aa7.88□□□□□ -1.15
UPF3AP2-202ENST00000578315 LOC389332A0A1B0GUA5 103 aa7.87□□□□□ -1.15
UPF3AP2-202ENST00000578315 Q8IZM0 81 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms