RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 MIAQ16674 131 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 Q6ZS52 159 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 C20orf197Q8N268 126 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 DEFB104AQ8WTQ1 72 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 RMI2Q96E14 147 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 TMEM141Q96I45 108 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 KRTAP4-3Q9BYR4 195 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 RETNQ9HD89 108 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 LINC00474Q9P2X8 69 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 UBE2D4Q9Y2X8 147 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 SMG1Q96Q15 3661 aaKnown RBP1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 SDK2Q58EX2 2172 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 BSNQ9UPA5 3926 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 C5orf42Q9H799 3197 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 COL27A1Q8IZC6 1860 aaPredicted RBP1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 KNL1Q8NG31 2342 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 IGLV1-50A0A075B6I6 118 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 TRAV23DV6A0A075B6W5 121 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV1-58A0A0C4DH39 117 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 TRBV7-6A0A0J9YX20 115 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 A0A0J9YXV3 536 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV5-10-1A0A0J9YXX1 117 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 TRBV27A0A0K0K1C4 114 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 F8WEM9 126 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 BUB1B-PAK6H3BSN5 160 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 TIMM17BO60830 172 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 LYZL6O75951 148 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHG2P01859 326 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV3-30-3P0DP02 117 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 CD28P10747 220 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 RNASE4P34096 147 aaKnown RBP1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 ATP5EP56381 51 aaPredicted RBP1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 SNRPD3P62318 126 aaKnown RBP1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 SPANXN1Q5VSR9 72 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 ATP5EP2Q5VTU8 51 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 Q5W150 140 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 SOSTDC1Q6X4U4 206 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 PP632Q6XCG6 107 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 GPHB5Q86YW7 130 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 PRR15Q8IV56 129 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 C1orf158Q8N1D5 194 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 DEFB119Q8N690 84 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 RNF182Q8N6D2 247 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 WFDC9Q8NEX5 89 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 CCL13Q99616 98 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 TTTY12Q9BZ98 90 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 LINC00574Q9H8X3 128 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 C14orf132Q9NPU4 83 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 LINC00846Q9NV44 126 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 NDUFA12Q9UI09 145 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 SNURFQ9Y675 71 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 S4R3C0 116 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 MALRD1Q5VYJ5 2156 aa1.25□□□□□ -2.21
PTP4A1-204ENST00000578299 CFAP47Q6ZTR5 3102 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 CADP27708 2225 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 CHD7Q9P2D1 2997 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 CSMD1Q96PZ7 3565 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV3OR16-8A0A075B7F1 116 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV1-18A0A0C4DH31 117 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 IBA57-AS1B1ANH7 110 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 F6UB75 175 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 NCR3O14931 201 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 NDUFA1O15239 70 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 CCKP06307 115 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 BAALC-AS2P0C853 105 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 POLR2KP53803 58 aaKnown RBP1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 KRTAP10-10P60014 251 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 RBM3P98179 157 aaKnown RBP1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 PRB3Q04118 309 aaPredicted RBP1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 CD164Q04900 197 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 SYCNQ0VAF6 134 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 KLKP1Q107X0 134 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 PMAIP1Q13794 54 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 LY6EQ16553 131 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 IGFL1Q6UW32 110 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 Q6ZRU5 148 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 DEFB132Q7Z7B7 95 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 C11orf72Q8NBR9 251 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 DEFB108BQ8NET1 73 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 OBSCN-AS1Q96MR7 158 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 BPESC1Q9GZL8 116 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 U3KQA8 63 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 ABCA1O95477 2261 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 DNAH1Q9P2D7 4330 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 MED13Q9UHV7 2174 aa1.24□□□□□ -2.21
PTP4A1-204ENST00000578299 CACNA1GO43497 2377 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 PLCE1Q9P212 2302 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 TRAV7A0A075B6U4 112 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV1-3A0A0C4DH29 117 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 TRBV7-4A0A0J9YYF1 115 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 TRBV6-5A0A0K0K1A5 114 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 IGKV2-29A2NJV5 120 aaPredicted RBP1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 PPP1R17O96001 155 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV1-46P01743 117 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 CRPP02741 224 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 CTSGP08311 255 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 RNASE3P12724 160 aaKnown RBP1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 DEFB1P60022 68 aa1.23□□□□□ -2.21
PTP4A1-204ENST00000578299 BLCAPP62952 87 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms