RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 LINC00308Q8TCZ7 52 aa10.59□□□□□ -0.71
CUEDC1-206ENST00000577830 ODF3L2Q3SX64 289 aa10.59□□□□□ -0.71
CUEDC1-206ENST00000577830 A0A096LPF7 62 aa10.58□□□□□ -0.72
CUEDC1-206ENST00000577830 LINC00158P58513 81 aa10.58□□□□□ -0.72
CUEDC1-206ENST00000577830 DEFB113Q30KQ7 82 aa10.58□□□□□ -0.72
CUEDC1-206ENST00000577830 C11orf72Q8NBR9 251 aa10.58□□□□□ -0.72
CUEDC1-206ENST00000577830 CLPSL2Q6UWE3 100 aa10.58□□□□□ -0.72
CUEDC1-206ENST00000577830 WFDC11Q8NEX6 87 aa10.58□□□□□ -0.72
CUEDC1-206ENST00000577830 OR13C6PQ8NH95 151 aa10.58□□□□□ -0.72
CUEDC1-206ENST00000577830 ZNF469Q96JG9 3925 aaPredicted RBP10.58□□□□□ -0.72
CUEDC1-206ENST00000577830 TENM4Q6N022 2769 aa10.58□□□□□ -0.72
CUEDC1-206ENST00000577830 CCDC179H3BU77 68 aa10.58□□□□□ -0.72
CUEDC1-206ENST00000577830 CHCHD5Q9BSY4 110 aa10.58□□□□□ -0.72
CUEDC1-206ENST00000577830 TRGV4A0A0C4DH28 118 aa10.57□□□□□ -0.72
CUEDC1-206ENST00000577830 DEFB130BP0DP73 79 aa10.57□□□□□ -0.72
CUEDC1-206ENST00000577830 DEFB130AP0DP74 79 aa10.57□□□□□ -0.72
CUEDC1-206ENST00000577830 IFITM1P13164 125 aa10.57□□□□□ -0.72
CUEDC1-206ENST00000577830 A0A096LNT2 108 aa10.57□□□□□ -0.72
CUEDC1-206ENST00000577830 NDUFV3P56181 108 aaKnown RBP10.57□□□□□ -0.72
CUEDC1-206ENST00000577830 C1orf158Q8N1D5 194 aa10.57□□□□□ -0.72
CUEDC1-206ENST00000577830 HERVK_113P63121 156 aa10.56□□□□□ -0.72
CUEDC1-206ENST00000577830 C5orf38Q86SI9 138 aa10.56□□□□□ -0.72
CUEDC1-206ENST00000577830 SPANXDQ9BXN6 97 aa10.56□□□□□ -0.72
CUEDC1-206ENST00000577830 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
CUEDC1-206ENST00000577830 SMIM9A6NGZ8 99 aa10.56□□□□□ -0.72
CUEDC1-206ENST00000577830 J3QLI3 93 aa10.56□□□□□ -0.72
CUEDC1-206ENST00000577830 SOSTDC1Q6X4U4 206 aa10.56□□□□□ -0.72
CUEDC1-206ENST00000577830 NTM-AS1Q6ZSK4 140 aa10.55□□□□□ -0.72
CUEDC1-206ENST00000577830 K7EQD1 137 aa10.54□□□□□ -0.72
CUEDC1-206ENST00000577830 LST1O00453 97 aa10.54□□□□□ -0.72
CUEDC1-206ENST00000577830 CCL24O00175 119 aa10.54□□□□□ -0.72
CUEDC1-206ENST00000577830 NDUFA1O15239 70 aa10.54□□□□□ -0.72
CUEDC1-206ENST00000577830 C4orf3Q8WVX3 66 aa10.53□□□□□ -0.72
CUEDC1-206ENST00000577830 LOC107984640A0A0U1RRK4 108 aa10.53□□□□□ -0.72
CUEDC1-206ENST00000577830 SMIM1B2RUZ4 78 aa10.53□□□□□ -0.72
CUEDC1-206ENST00000577830 GAGE2AQ6NT46 116 aa10.53□□□□□ -0.72
CUEDC1-206ENST00000577830 BAALC-AS2P0C853 105 aa10.52□□□□□ -0.72
CUEDC1-206ENST00000577830 MIR7-3HGQ8N6C7 128 aa10.52□□□□□ -0.72
CUEDC1-206ENST00000577830 TMEM243Q9BU79 118 aa10.52□□□□□ -0.72
CUEDC1-206ENST00000577830 ATP5G1P05496 136 aa10.52□□□□□ -0.73
CUEDC1-206ENST00000577830 RNASE1P07998 156 aaKnown RBP10.52□□□□□ -0.73
CUEDC1-206ENST00000577830 DNAJC30Q96LL9 226 aa10.52□□□□□ -0.73
CUEDC1-206ENST00000577830 ESM1Q9NQ30 184 aa10.51□□□□□ -0.73
CUEDC1-206ENST00000577830 H3BT86 120 aa10.51□□□□□ -0.73
CUEDC1-206ENST00000577830 PAX4O43316 350 aa10.51□□□□□ -0.73
CUEDC1-206ENST00000577830 DAZ2Q13117 558 aaKnown RBP10.51□□□□□ -0.73
CUEDC1-206ENST00000577830 DAZ4Q86SG3 579 aaKnown RBP10.51□□□□□ -0.73
CUEDC1-206ENST00000577830 DAZ3Q9NR90 486 aaKnown RBP10.51□□□□□ -0.73
CUEDC1-206ENST00000577830 RETNQ9HD89 108 aa10.5□□□□□ -0.73
CUEDC1-206ENST00000577830 CRPP02741 224 aa10.5□□□□□ -0.73
CUEDC1-206ENST00000577830 NHLRC4P0CG21 123 aaPredicted RBP10.5□□□□□ -0.73
CUEDC1-206ENST00000577830 TIRAPP58753 221 aa10.5□□□□□ -0.73
CUEDC1-206ENST00000577830 OXLD1Q5BKU9 147 aa10.5□□□□□ -0.73
CUEDC1-206ENST00000577830 KMT2BQ9UMN6 2715 aaPredicted RBP10.49□□□□□ -0.73
CUEDC1-206ENST00000577830 UNC79Q9P2D8 2635 aa10.49□□□□□ -0.73
CUEDC1-206ENST00000577830 DNAL4O96015 105 aa10.48□□□□□ -0.73
CUEDC1-206ENST00000577830 RNF152Q8N8N0 203 aa10.48□□□□□ -0.73
CUEDC1-206ENST00000577830 CR1P17927 2039 aa10.48□□□□□ -0.73
CUEDC1-206ENST00000577830 DNAJC9-AS1A6NH13 148 aa10.48□□□□□ -0.73
CUEDC1-206ENST00000577830 XCL1P47992 114 aa10.48□□□□□ -0.73
CUEDC1-206ENST00000577830 CDC42SE2Q9NRR3 84 aa10.48□□□□□ -0.73
CUEDC1-206ENST00000577830 FAM218AQ96MZ4 157 aa10.48□□□□□ -0.73
CUEDC1-206ENST00000577830 SND1-IT1Q9HBX3 110 aa10.48□□□□□ -0.73
CUEDC1-206ENST00000577830 IGLV4-60A0A075B6I1 120 aa10.47□□□□□ -0.73
CUEDC1-206ENST00000577830 FAM236AA0A1B0GUQ0 79 aa10.47□□□□□ -0.73
CUEDC1-206ENST00000577830 FAM236BA0A1B0GV22 79 aa10.47□□□□□ -0.73
CUEDC1-206ENST00000577830 COX7A2LO14548 114 aa10.47□□□□□ -0.73
CUEDC1-206ENST00000577830 BEAN1Q3B7T3 259 aa10.47□□□□□ -0.73
CUEDC1-206ENST00000577830 SLPIP03973 132 aa10.47□□□□□ -0.73
CUEDC1-206ENST00000577830 DEFB4AO15263 64 aa10.47□□□□□ -0.73
CUEDC1-206ENST00000577830 C6orf226Q5I0X4 101 aa10.45□□□□□ -0.74
CUEDC1-206ENST00000577830 COX7B2Q8TF08 81 aa10.45□□□□□ -0.74
CUEDC1-206ENST00000577830 EDA2RQ9HAV5 297 aa10.45□□□□□ -0.74
CUEDC1-206ENST00000577830 IGLV10-54A0A075B6I4 117 aa10.44□□□□□ -0.74
CUEDC1-206ENST00000577830 V9GYY9 64 aa10.44□□□□□ -0.74
CUEDC1-206ENST00000577830 AKAP9Q99996 3911 aa10.43□□□□□ -0.74
CUEDC1-206ENST00000577830 IGLV5-39A0A0G2JS06 123 aa10.43□□□□□ -0.74
CUEDC1-206ENST00000577830 PF4P02776 101 aa10.43□□□□□ -0.74
CUEDC1-206ENST00000577830 KRTAP1-3Q8IUG1 177 aa10.43□□□□□ -0.74
CUEDC1-206ENST00000577830 IL17DQ8TAD2 202 aa10.43□□□□□ -0.74
CUEDC1-206ENST00000577830 TIMM17BO60830 172 aa10.43□□□□□ -0.74
CUEDC1-206ENST00000577830 C14orf132Q9NPU4 83 aa10.43□□□□□ -0.74
CUEDC1-206ENST00000577830 LINC00337Q8N6G1 96 aa10.42□□□□□ -0.74
CUEDC1-206ENST00000577830 COPS9Q8WXC6 57 aa10.42□□□□□ -0.74
CUEDC1-206ENST00000577830 PRR3P79522 188 aaKnown RBP10.41□□□□□ -0.74
CUEDC1-206ENST00000577830 IGKV3D-7A0A0C4DH55 119 aa10.41□□□□□ -0.74
CUEDC1-206ENST00000577830 LECT2O14960 151 aa10.41□□□□□ -0.74
CUEDC1-206ENST00000577830 SMR3AQ99954 134 aa10.41□□□□□ -0.74
CUEDC1-206ENST00000577830 IGLV5-45A0A087WSX0 123 aa10.41□□□□□ -0.74
CUEDC1-206ENST00000577830 FSHBP01225 129 aa10.41□□□□□ -0.74
CUEDC1-206ENST00000577830 A0A087WYN8 130 aa10.4□□□□□ -0.74
CUEDC1-206ENST00000577830 TRBV10-1A0A0K0K1A3 114 aa10.4□□□□□ -0.74
CUEDC1-206ENST00000577830 HTN3P15516 51 aa10.4□□□□□ -0.74
CUEDC1-206ENST00000577830 C9orf153Q5TBE3 101 aa10.4□□□□□ -0.75
CUEDC1-206ENST00000577830 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
CUEDC1-206ENST00000577830 SMCR5Q8TEV8 140 aa10.39□□□□□ -0.75
CUEDC1-206ENST00000577830 HRCT1Q6UXD1 115 aa10.39□□□□□ -0.75
CUEDC1-206ENST00000577830 FLNBO75369 2602 aaKnown RBP10.38□□□□□ -0.75
CUEDC1-206ENST00000577830 GYPEP15421 78 aa10.38□□□□□ -0.75
CUEDC1-206ENST00000577830 TRAV13-2A0A0B4J235 113 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms