RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 LHFPL6Q9Y693 200 aa1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 TNS1Q9HBL0 1735 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 PLXNA2O75051 1894 aa1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 NHSQ6T4R5 1651 aa1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 MUC22E2RYF6 1773 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 IGHV3OR16-8A0A075B7F1 116 aa1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 IGHV3-21A0A0B4J1V1 117 aa1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 IGHV3-66A0A0C4DH42 116 aa1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 A0A1W2PNM2 257 aa1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 CRPP02741 224 aa1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 COX6CP09669 75 aa1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 RPL38P63173 70 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 OBSCN-AS1Q96MR7 158 aa1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 ICOSQ9Y6W8 199 aa1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 EML5Q05BV3 1969 aa1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 NCOA6Q14686 2063 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-202ENST00000577300 SCN7AQ01118 1682 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 RICTORQ6R327 1708 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 DOT1LQ8TEK3 1739 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 LCTP09848 1927 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 IGHV7-4-1A0A0J9YVY3 117 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 CLPSL1A2RUU4 121 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 IGIPA6NJ69 53 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 HIGD1CA8MV81 97 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 D6R8Y8 96 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 MIR22HGQ0VDD5 57 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 CSAG1Q6PB30 78 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 MUSTN1Q8IVN3 82 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 Q8NAQ8 132 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 FDCSPQ8NFU4 85 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 TMEM254Q8TBM7 123 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 CIRBP-AS1Q8TBR5 109 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 CAMK2N2Q96S95 79 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 ZNF831Q5JPB2 1677 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 NRXN2Q9P2S2 1712 aa1.8□□□□□ -2.12
SMCHD1-202ENST00000577300 DOCK11Q5JSL3 2073 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 ZNF407Q9C0G0 2248 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 IGHV3-49A0A0A0MS15 119 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 IGHV3-73A0A0B4J1V6 119 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 TRAV12-1A0A0B4J245 112 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 A0A1B0GVX0 72 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 A8MUU9 505 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 H7C2G1 150 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 I3L3M4 83 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 HMGN4O00479 90 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 PLNP26678 52 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 NNATQ16517 81 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 ENHOQ6UWT2 76 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 CASC2Q6XLA1 102 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 PRR15LQ9BU68 103 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 NDUFA4L2Q9NRX3 87 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 PLAC8Q9NZF1 115 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 LMO7Q8WWI1 1683 aa1.79□□□□□ -2.12
SMCHD1-202ENST00000577300 IGKV1D-42A0A075B6H8 117 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 A0A087WSZ3 146 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 IGHV3-15A0A0B4J1V0 119 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 TRAV12-3A0A0B4J271 114 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 C17orf98A8MV24 154 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 NDUFA3O95167 84 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 ARL14EPLP0DKL9 152 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 ZNF137PP52743 207 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 ZNF833PQ6ZTB9 187 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 WFDC9Q8NEX5 89 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 Q8TAT8 98 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 AMELXQ99217 191 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 LINC00467Q9BRT7 94 aa1.78□□□□□ -2.12
SMCHD1-202ENST00000577300 MYOFQ9NZM1 2061 aa1.78□□□□□ -2.13
SMCHD1-202ENST00000577300 A0A0G2JMZ2 1700 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 LRRC37A2A6NM11 1700 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 LRRC37AA6NMS7 1700 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 CPSF4LA6NMK7 179 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 F8VRH5 84 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 K7ERS5 55 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 M0R1W7 72 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 MSMBP08118 114 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 TFF3Q07654 80 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 NREPQ16612 68 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 FAM27BQ5VT28 67 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 HCP5Q6MZN7 132 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 C20orf166-AS1Q96NR2 134 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 TTTY10Q9BZA0 68 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 HEATR1Q9H583 2144 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 ZNRD1Q9P1U0 126 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 TMEM14AQ9Y6G1 99 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 FBN3Q75N90 2809 aa1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 COL11A1P12107 1806 aaPredicted RBP1.77□□□□□ -2.13
SMCHD1-202ENST00000577300 SCN3AQ9NY46 2000 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 IGKV1D-37A0A075B6S9 117 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 TRBV6-5A0A0K0K1A5 114 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 LCE6AA0A183 80 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 M0R135 149 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 DNAL4O96015 105 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 CTSGP08311 255 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 SAA2P0DJI9 122 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 ELOF1P60002 83 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 CNBPP62633 177 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 DEFB113Q30KQ7 82 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 NTM-AS1Q6ZSK4 140 aa1.76□□□□□ -2.13
SMCHD1-202ENST00000577300 MUC7Q8TAX7 377 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms