RNA–Protein interactions for RNA: ENST00000576601.1

CIITA-211, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 4

Gene CIITA, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-211ENST00000576601 NPYP01303 97 aa8.35□□□□□ -1.07
CIITA-211ENST00000576601 TMEM241Q24JQ0 296 aa8.35□□□□□ -1.07
CIITA-211ENST00000576601 C10orf25Q5T742 122 aa8.35□□□□□ -1.07
CIITA-211ENST00000576601 ORAOV1Q8WV07 137 aa8.35□□□□□ -1.07
CIITA-211ENST00000576601 SMIM2Q9BVW6 85 aa8.35□□□□□ -1.07
CIITA-211ENST00000576601 D6R8Y8 96 aa8.34□□□□□ -1.07
CIITA-211ENST00000576601 PPP1R17O96001 155 aa8.34□□□□□ -1.07
CIITA-211ENST00000576601 MT-ND6P03923 174 aa8.34□□□□□ -1.07
CIITA-211ENST00000576601 MRPL54Q6P161 138 aaKnown RBP8.34□□□□□ -1.07
CIITA-211ENST00000576601 TRBV24-1A0A075B6N3 115 aa8.33□□□□□ -1.08
CIITA-211ENST00000576601 IGHV3OR16-9A0A0B4J2B5 98 aa8.33□□□□□ -1.08
CIITA-211ENST00000576601 A0A1B0GVG6 124 aa8.33□□□□□ -1.08
CIITA-211ENST00000576601 TCAPO15273 167 aa8.33□□□□□ -1.08
CIITA-211ENST00000576601 CKS2P33552 79 aa8.33□□□□□ -1.08
CIITA-211ENST00000576601 RPL32P62910 135 aaKnown RBP8.33□□□□□ -1.08
CIITA-211ENST00000576601 C1orf137Q5JT78 98 aa8.33□□□□□ -1.08
CIITA-211ENST00000576601 PRR26Q8N8Z3 221 aa8.33□□□□□ -1.08
CIITA-211ENST00000576601 OR10D4PQ8NGN7 298 aa8.33□□□□□ -1.08
CIITA-211ENST00000576601 C20orf78Q9BR46 151 aa8.33□□□□□ -1.08
CIITA-211ENST00000576601 CRCT1Q9UGL9 99 aa8.33□□□□□ -1.08
CIITA-211ENST00000576601 NAT8Q9UHE5 227 aa8.33□□□□□ -1.08
CIITA-211ENST00000576601 A0A1B0GXF2 115 aa8.32□□□□□ -1.08
CIITA-211ENST00000576601 SMAGPQ0VAQ4 97 aa8.32□□□□□ -1.08
CIITA-211ENST00000576601 KRTAP7-1Q8IUC3 87 aa8.32□□□□□ -1.08
CIITA-211ENST00000576601 C6orf48Q9UBA6 75 aa8.32□□□□□ -1.08
CIITA-211ENST00000576601 LINC00862A6NCI5 91 aa8.31□□□□□ -1.08
CIITA-211ENST00000576601 IFITM10A6NMD0 228 aa8.31□□□□□ -1.08
CIITA-211ENST00000576601 UNQ6190/PRO20217Q6UXQ8 127 aa8.31□□□□□ -1.08
CIITA-211ENST00000576601 TMEM18Q96B42 140 aa8.31□□□□□ -1.08
CIITA-211ENST00000576601 SPANXA1Q9NS26 97 aa8.31□□□□□ -1.08
CIITA-211ENST00000576601 MRPL35Q9NZE8 188 aaKnown RBP8.31□□□□□ -1.08
CIITA-211ENST00000576601 HBBP68871 147 aa8.3□□□□□ -1.08
CIITA-211ENST00000576601 MRPS36P82909 103 aaKnown RBP8.3□□□□□ -1.08
CIITA-211ENST00000576601 PRR4Q16378 134 aa8.3□□□□□ -1.08
CIITA-211ENST00000576601 RNF151Q2KHN1 245 aa8.3□□□□□ -1.08
CIITA-211ENST00000576601 FAM19A5Q7Z5A7 132 aaPredicted RBP8.3□□□□□ -1.08
CIITA-211ENST00000576601 NDUFA1O15239 70 aa8.29□□□□□ -1.08
CIITA-211ENST00000576601 A0A1B0GW15 77 aa8.28□□□□□ -1.08
CIITA-211ENST00000576601 IGLV7-43P04211 117 aa8.28□□□□□ -1.08
CIITA-211ENST00000576601 KIAA0087Q14695 138 aa8.28□□□□□ -1.08
CIITA-211ENST00000576601 GAGE2EQ4V326 116 aa8.28□□□□□ -1.08
CIITA-211ENST00000576601 LCE2DQ5TA82 110 aaPredicted RBP8.28□□□□□ -1.08
CIITA-211ENST00000576601 GAGE2DQ9UEU5 116 aa8.28□□□□□ -1.08
CIITA-211ENST00000576601 IGLV4-3A0A075B6K6 122 aa8.27□□□□□ -1.09
CIITA-211ENST00000576601 ZC2HC1BQ5TFG8 222 aa8.27□□□□□ -1.09
CIITA-211ENST00000576601 C2orf82Q6UX34 121 aa8.27□□□□□ -1.09
CIITA-211ENST00000576601 SMDT1Q9H4I9 107 aa8.27□□□□□ -1.09
CIITA-211ENST00000576601 A0A087WZ39 114 aa8.26□□□□□ -1.09
CIITA-211ENST00000576601 TLX1NBP0CAT3 122 aa8.26□□□□□ -1.09
CIITA-211ENST00000576601 LINC00242Q5T6M2 205 aa8.26□□□□□ -1.09
CIITA-211ENST00000576601 TGIF2-C20orf24A0A0A6YYL0 155 aa8.25□□□□□ -1.09
CIITA-211ENST00000576601 F8W036 122 aa8.25□□□□□ -1.09
CIITA-211ENST00000576601 LINC00173Q6ZV60 143 aa8.25□□□□□ -1.09
CIITA-211ENST00000576601 PRELID3AQ96N28 172 aa8.25□□□□□ -1.09
CIITA-211ENST00000576601 IMMP2LQ96T52 175 aa8.25□□□□□ -1.09
CIITA-211ENST00000576601 H0Y9J4 135 aa8.24□□□□□ -1.09
CIITA-211ENST00000576601 M0QXV9 152 aa8.24□□□□□ -1.09
CIITA-211ENST00000576601 KRTAP1-4P0C5Y4 121 aa8.24□□□□□ -1.09
CIITA-211ENST00000576601 IFI27P40305 119 aaPredicted RBP8.24□□□□□ -1.09
CIITA-211ENST00000576601 PEA15Q15121 130 aa8.24□□□□□ -1.09
CIITA-211ENST00000576601 C9orf129Q5T035 196 aaKnown RBP8.24□□□□□ -1.09
CIITA-211ENST00000576601 ORMDL3Q8N138 153 aa8.24□□□□□ -1.09
CIITA-211ENST00000576601 LOC389332A0A1B0GUA5 103 aa8.23□□□□□ -1.09
CIITA-211ENST00000576601 F8WDY8 70 aa8.23□□□□□ -1.09
CIITA-211ENST00000576601 PPBPP02775 128 aa8.23□□□□□ -1.09
CIITA-211ENST00000576601 S100A8P05109 93 aa8.23□□□□□ -1.09
CIITA-211ENST00000576601 TMEM136Q6ZRR5 245 aa8.23□□□□□ -1.09
CIITA-211ENST00000576601 DIRC1Q969H9 104 aa8.23□□□□□ -1.09
CIITA-211ENST00000576601 UBE2D1P51668 147 aa8.22□□□□□ -1.09
CIITA-211ENST00000576601 TMEM141Q96I45 108 aa8.22□□□□□ -1.09
CIITA-211ENST00000576601 PYGO1Q9Y3Y4 419 aa8.22□□□□□ -1.09
CIITA-211ENST00000576601 RAB5AP20339 215 aa8.21□□□□□ -1.1
CIITA-211ENST00000576601 ATP5L2Q7Z4Y8 100 aa8.21□□□□□ -1.1
CIITA-211ENST00000576601 NDUFC2-KCTD14E9PQ53 114 aa8.2□□□□□ -1.1
CIITA-211ENST00000576601 UBE2BP63146 152 aa8.2□□□□□ -1.1
CIITA-211ENST00000576601 IGLV1-50A0A075B6I6 118 aa8.19□□□□□ -1.1
CIITA-211ENST00000576601 TRBV30A0A0K0K1B3 111 aa8.19□□□□□ -1.1
CIITA-211ENST00000576601 C2orf66Q6UXQ4 117 aa8.19□□□□□ -1.1
CIITA-211ENST00000576601 TEX43Q6ZNM6 134 aa8.19□□□□□ -1.1
CIITA-211ENST00000576601 LINC00469Q8N7U9 141 aa8.19□□□□□ -1.1
CIITA-211ENST00000576601 PRSS47A8MTI9 375 aa8.18□□□□□ -1.1
CIITA-211ENST00000576601 AMELXQ99217 191 aa8.18□□□□□ -1.1
CIITA-211ENST00000576601 MAP1LC3AQ9H492 121 aa8.18□□□□□ -1.1
CIITA-211ENST00000576601 Q8N8P6 123 aa8.17□□□□□ -1.1
CIITA-211ENST00000576601 PACRGQ96M98 296 aaPredicted RBP8.17□□□□□ -1.1
CIITA-211ENST00000576601 TOMM7Q9P0U1 55 aa8.17□□□□□ -1.1
CIITA-211ENST00000576601 CYSLTR1Q9Y271 337 aa8.17□□□□□ -1.1
CIITA-211ENST00000576601 C2orf88Q9BSF0 95 aa8.16□□□□□ -1.1
CIITA-211ENST00000576601 XAGE1AQ9HD64 81 aa8.16□□□□□ -1.1
CIITA-211ENST00000576601 IGIPA6NJ69 53 aa8.15□□□□□ -1.1
CIITA-211ENST00000576601 LAMTOR2Q9Y2Q5 125 aa8.15□□□□□ -1.1
CIITA-211ENST00000576601 Q6ZN92 141 aa8.14□□□□□ -1.11
CIITA-211ENST00000576601 LINC01561Q8N1V8 128 aa8.14□□□□□ -1.11
CIITA-211ENST00000576601 CDKN2A-AS1Q9UH64 79 aa8.14□□□□□ -1.11
CIITA-211ENST00000576601 FAM19A3Q7Z5A8 133 aa8.13□□□□□ -1.11
CIITA-211ENST00000576601 Q8IZM0 81 aa8.13□□□□□ -1.11
CIITA-211ENST00000576601 VCX2Q9H322 139 aa8.13□□□□□ -1.11
CIITA-211ENST00000576601 PRSS2P07478 247 aa8.12□□□□□ -1.11
CIITA-211ENST00000576601 CKS1BP61024 79 aa8.12□□□□□ -1.11
CIITA-211ENST00000576601 ORMDL2Q53FV1 153 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms