RNA–Protein interactions for RNA: ENST00000575637.1

CHRNE-203, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 3

Gene CHRNE, Length 557 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-203ENST00000575637 FABP9Q0Z7S8 132 aa11.26□□□□□ -0.61
CHRNE-203ENST00000575637 TMEM141Q96I45 108 aa11.26□□□□□ -0.61
CHRNE-203ENST00000575637 IGHV3OR16-9A0A0B4J2B5 98 aa11.25□□□□□ -0.61
CHRNE-203ENST00000575637 ZNF561-AS1K7EIQ3 104 aa11.25□□□□□ -0.61
CHRNE-203ENST00000575637 CHTF8P0CG12 524 aa11.25□□□□□ -0.61
CHRNE-203ENST00000575637 CIRBPQ14011 172 aaKnown RBP11.25□□□□□ -0.61
CHRNE-203ENST00000575637 IGIPA6NJ69 53 aa11.24□□□□□ -0.61
CHRNE-203ENST00000575637 INAFM2P0DMQ5 153 aa11.24□□□□□ -0.61
CHRNE-203ENST00000575637 COX6A2Q02221 97 aa11.24□□□□□ -0.61
CHRNE-203ENST00000575637 PRSS3P2Q8NHM4 247 aa11.24□□□□□ -0.61
CHRNE-203ENST00000575637 IGLV4-69A0A075B6H9 119 aa11.23□□□□□ -0.61
CHRNE-203ENST00000575637 ZC2HC1BQ5TFG8 222 aa11.23□□□□□ -0.61
CHRNE-203ENST00000575637 TEX43Q6ZNM6 134 aa11.23□□□□□ -0.61
CHRNE-203ENST00000575637 CARD19Q96LW7 228 aa11.23□□□□□ -0.61
CHRNE-203ENST00000575637 SYCNQ0VAF6 134 aa11.22□□□□□ -0.61
CHRNE-203ENST00000575637 LINC00242Q5T6M2 205 aa11.22□□□□□ -0.61
CHRNE-203ENST00000575637 LINC00173Q6ZV60 143 aa11.22□□□□□ -0.61
CHRNE-203ENST00000575637 SPACA4Q8TDM5 124 aa11.22□□□□□ -0.61
CHRNE-203ENST00000575637 FLG2Q5D862 2391 aaPredicted RBP11.21□□□□□ -0.61
CHRNE-203ENST00000575637 APOMO95445 188 aa11.21□□□□□ -0.61
CHRNE-203ENST00000575637 PLA2G1BP04054 148 aaKnown RBP11.21□□□□□ -0.61
CHRNE-203ENST00000575637 NPSP0C0P6 89 aa11.21□□□□□ -0.61
CHRNE-203ENST00000575637 G0S2P27469 103 aa11.21□□□□□ -0.61
CHRNE-203ENST00000575637 UBE2D1P51668 147 aa11.21□□□□□ -0.61
CHRNE-203ENST00000575637 Q6ZN92 141 aa11.21□□□□□ -0.61
CHRNE-203ENST00000575637 TOMM6Q96B49 74 aa11.21□□□□□ -0.61
CHRNE-203ENST00000575637 AMELXQ99217 191 aa11.21□□□□□ -0.61
CHRNE-203ENST00000575637 VCX2Q9H322 139 aa11.21□□□□□ -0.61
CHRNE-203ENST00000575637 LINC01546A6NGU7 62 aa11.2□□□□□ -0.62
CHRNE-203ENST00000575637 DPH3Q96FX2 82 aa11.2□□□□□ -0.62
CHRNE-203ENST00000575637 C2orf88Q9BSF0 95 aa11.2□□□□□ -0.62
CHRNE-203ENST00000575637 TRAPPC1Q9Y5R8 145 aa11.2□□□□□ -0.62
CHRNE-203ENST00000575637 A0A087WYN8 130 aa11.19□□□□□ -0.62
CHRNE-203ENST00000575637 IGKV2-24A0A0C4DH68 120 aa11.19□□□□□ -0.62
CHRNE-203ENST00000575637 SPAG11BQ08648 103 aa11.19□□□□□ -0.62
CHRNE-203ENST00000575637 Q6ZRU5 148 aa11.19□□□□□ -0.62
CHRNE-203ENST00000575637 OR10D4PQ8NGN7 298 aa11.19□□□□□ -0.62
CHRNE-203ENST00000575637 ORAOV1Q8WV07 137 aa11.19□□□□□ -0.62
CHRNE-203ENST00000575637 C2orf48Q96LS8 159 aa11.19□□□□□ -0.62
CHRNE-203ENST00000575637 YPEL4Q96NS1 127 aa11.19□□□□□ -0.62
CHRNE-203ENST00000575637 TIMM17AQ99595 171 aa11.19□□□□□ -0.62
CHRNE-203ENST00000575637 FA2HQ7L5A8 372 aa11.18□□□□□ -0.62
CHRNE-203ENST00000575637 SLC7A5P1Q8MH63 180 aa11.18□□□□□ -0.62
CHRNE-203ENST00000575637 CAMK2N2Q96S95 79 aa11.18□□□□□ -0.62
CHRNE-203ENST00000575637 A0A087WZ39 114 aa11.17□□□□□ -0.62
CHRNE-203ENST00000575637 A0A096LNI7 61 aa11.17□□□□□ -0.62
CHRNE-203ENST00000575637 KRTAP10-4P60372 401 aaPredicted RBP11.17□□□□□ -0.62
CHRNE-203ENST00000575637 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
CHRNE-203ENST00000575637 MAJINQ3KP22 176 aa11.16□□□□□ -0.62
CHRNE-203ENST00000575637 PAPPA-AS1Q5QFB9 102 aa11.16□□□□□ -0.62
CHRNE-203ENST00000575637 ERASQ7Z444 233 aa11.16□□□□□ -0.62
CHRNE-203ENST00000575637 SMCO4Q9NRQ5 59 aa11.16□□□□□ -0.62
CHRNE-203ENST00000575637 PLAC8Q9NZF1 115 aa11.16□□□□□ -0.62
CHRNE-203ENST00000575637 C18orf32Q8TCD1 76 aa11.15□□□□□ -0.62
CHRNE-203ENST00000575637 PKIGQ9Y2B9 76 aa11.15□□□□□ -0.62
CHRNE-203ENST00000575637 FAM19A3Q7Z5A8 133 aa11.14□□□□□ -0.63
CHRNE-203ENST00000575637 CBLN2Q8IUK8 224 aa11.14□□□□□ -0.63
CHRNE-203ENST00000575637 URB1-AS1Q96HZ7 61 aa11.14□□□□□ -0.63
CHRNE-203ENST00000575637 HERC1Q15751 4861 aa11.13□□□□□ -0.63
CHRNE-203ENST00000575637 RPL37AP61513 92 aaKnown RBP11.13□□□□□ -0.63
CHRNE-203ENST00000575637 KIAA0087Q14695 138 aa11.13□□□□□ -0.63
CHRNE-203ENST00000575637 A0A0J9YXV3 536 aa11.12□□□□□ -0.63
CHRNE-203ENST00000575637 LOC107984640A0A0U1RRK4 108 aa11.12□□□□□ -0.63
CHRNE-203ENST00000575637 LINC01549A6NIU2 74 aa11.12□□□□□ -0.63
CHRNE-203ENST00000575637 C10orf25Q5T742 122 aa11.12□□□□□ -0.63
CHRNE-203ENST00000575637 LINC01561Q8N1V8 128 aa11.12□□□□□ -0.63
CHRNE-203ENST00000575637 STPG4Q8N801 248 aa11.12□□□□□ -0.63
CHRNE-203ENST00000575637 LINC00474Q9P2X8 69 aa11.12□□□□□ -0.63
CHRNE-203ENST00000575637 F8WDY8 70 aa11.11□□□□□ -0.63
CHRNE-203ENST00000575637 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.11□□□□□ -0.63
CHRNE-203ENST00000575637 LINC00614P0C842 121 aa11.11□□□□□ -0.63
CHRNE-203ENST00000575637 PTTG1IPP53801 180 aa11.11□□□□□ -0.63
CHRNE-203ENST00000575637 MRPL35Q9NZE8 188 aaKnown RBP11.11□□□□□ -0.63
CHRNE-203ENST00000575637 DMBT1Q9UGM3 2413 aaPredicted RBP11.1□□□□□ -0.63
CHRNE-203ENST00000575637 A0A096LNJ9 63 aa11.1□□□□□ -0.63
CHRNE-203ENST00000575637 NDUFA1O15239 70 aa11.1□□□□□ -0.63
CHRNE-203ENST00000575637 SEC11AP67812 179 aa11.1□□□□□ -0.63
CHRNE-203ENST00000575637 GAGE2BQ13066 116 aa11.1□□□□□ -0.63
CHRNE-203ENST00000575637 RNF151Q2KHN1 245 aa11.1□□□□□ -0.63
CHRNE-203ENST00000575637 UNQ6190/PRO20217Q6UXQ8 127 aa11.1□□□□□ -0.63
CHRNE-203ENST00000575637 PKHD1L1Q86WI1 4243 aa11.1□□□□□ -0.63
CHRNE-203ENST00000575637 HERVK_113P63121 156 aa11.09□□□□□ -0.63
CHRNE-203ENST00000575637 CST9LQ9H4G1 147 aa11.09□□□□□ -0.63
CHRNE-203ENST00000575637 GEMIN7Q9H840 131 aaKnown RBP11.09□□□□□ -0.63
CHRNE-203ENST00000575637 CDKN2A-AS1Q9UH64 79 aa11.09□□□□□ -0.63
CHRNE-203ENST00000575637 LRP1Q07954 4544 aaKnown RBP11.09□□□□□ -0.63
CHRNE-203ENST00000575637 C6orf48Q9UBA6 75 aa11.08□□□□□ -0.64
CHRNE-203ENST00000575637 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
CHRNE-203ENST00000575637 PMVKQ15126 192 aa11.07□□□□□ -0.64
CHRNE-203ENST00000575637 PMCHL1Q16048 86 aa11.07□□□□□ -0.64
CHRNE-203ENST00000575637 C2orf82Q6UX34 121 aa11.07□□□□□ -0.64
CHRNE-203ENST00000575637 FAT3Q8TDW7 4589 aa11.07□□□□□ -0.64
CHRNE-203ENST00000575637 HBDP02042 147 aa11.06□□□□□ -0.64
CHRNE-203ENST00000575637 RAB5BP61020 215 aa11.06□□□□□ -0.64
CHRNE-203ENST00000575637 TINCRA0A1B0GVN0 87 aa11.05□□□□□ -0.64
CHRNE-203ENST00000575637 LINC00469Q8N7U9 141 aa11.05□□□□□ -0.64
CHRNE-203ENST00000575637 C7orf33Q8WU49 177 aa11.05□□□□□ -0.64
CHRNE-203ENST00000575637 TOMM7Q9P0U1 55 aa11.05□□□□□ -0.64
CHRNE-203ENST00000575637 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
CHRNE-203ENST00000575637 HNRNPA3P51991 378 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms