RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 C11orf72Q8NBR9 251 aa10.26□□□□□ -0.77
SMG6-215ENST00000574501 TOMM7Q9P0U1 55 aa10.26□□□□□ -0.77
SMG6-215ENST00000574501 HILS1P60008 231 aa10.26□□□□□ -0.77
SMG6-215ENST00000574501 NTM-AS1Q6ZSK4 140 aa10.26□□□□□ -0.77
SMG6-215ENST00000574501 CFAP46Q8IYW2 2715 aa10.26□□□□□ -0.77
SMG6-215ENST00000574501 HRCT1Q6UXD1 115 aa10.25□□□□□ -0.77
SMG6-215ENST00000574501 WFDC9Q8NEX5 89 aa10.25□□□□□ -0.77
SMG6-215ENST00000574501 HIVEP3Q5T1R4 2406 aa10.25□□□□□ -0.77
SMG6-215ENST00000574501 LINC00158P58513 81 aa10.24□□□□□ -0.77
SMG6-215ENST00000574501 FAM19A3Q7Z5A8 133 aa10.24□□□□□ -0.77
SMG6-215ENST00000574501 OBSCN-AS1Q96MR7 158 aa10.24□□□□□ -0.77
SMG6-215ENST00000574501 CDC42SE2Q9NRR3 84 aa10.24□□□□□ -0.77
SMG6-215ENST00000574501 AKAP9Q99996 3911 aa10.24□□□□□ -0.77
SMG6-215ENST00000574501 FHL2Q14192 279 aa10.24□□□□□ -0.77
SMG6-215ENST00000574501 NBPF19A0A087WUL8 3843 aa10.23□□□□□ -0.77
SMG6-215ENST00000574501 TRAV25A0A0B4J276 109 aa10.23□□□□□ -0.77
SMG6-215ENST00000574501 IGKV3OR2-268A0A0C4DH90 116 aa10.23□□□□□ -0.77
SMG6-215ENST00000574501 OVOL2Q9BRP0 275 aa10.23□□□□□ -0.77
SMG6-215ENST00000574501 SPG11Q96JI7 2443 aa10.23□□□□□ -0.77
SMG6-215ENST00000574501 RPL36AP83881 106 aaKnown RBP10.23□□□□□ -0.77
SMG6-215ENST00000574501 RPL36ALQ969Q0 106 aaKnown RBP10.23□□□□□ -0.77
SMG6-215ENST00000574501 TMEM89A2RUT3 159 aa10.22□□□□□ -0.77
SMG6-215ENST00000574501 WIPF1O43516 503 aa10.22□□□□□ -0.77
SMG6-215ENST00000574501 AVPP01185 164 aa10.22□□□□□ -0.77
SMG6-215ENST00000574501 IGHV4-59P01825 116 aa10.22□□□□□ -0.77
SMG6-215ENST00000574501 Q5XG85 94 aa10.22□□□□□ -0.77
SMG6-215ENST00000574501 C10orf105Q8TEF2 133 aa10.22□□□□□ -0.77
SMG6-215ENST00000574501 CCL18P55774 89 aa10.22□□□□□ -0.77
SMG6-215ENST00000574501 DEFB136Q30KP8 78 aa10.21□□□□□ -0.77
SMG6-215ENST00000574501 COX7B2Q8TF08 81 aa10.21□□□□□ -0.77
SMG6-215ENST00000574501 TRAV23DV6A0A075B6W5 121 aa10.21□□□□□ -0.78
SMG6-215ENST00000574501 TRGV1A0A0A0MS02 117 aa10.21□□□□□ -0.78
SMG6-215ENST00000574501 H0YGX0 51 aa10.21□□□□□ -0.78
SMG6-215ENST00000574501 PFN2P35080 140 aa10.21□□□□□ -0.78
SMG6-215ENST00000574501 SLURP1P55000 103 aa10.2□□□□□ -0.78
SMG6-215ENST00000574501 CHD6Q8TD26 2715 aa10.2□□□□□ -0.78
SMG6-215ENST00000574501 NOTCH3Q9UM47 2321 aa10.2□□□□□ -0.78
SMG6-215ENST00000574501 PAX4O43316 350 aa10.19□□□□□ -0.78
SMG6-215ENST00000574501 GHRHP01286 108 aa10.19□□□□□ -0.78
SMG6-215ENST00000574501 SS18Q15532 418 aa10.19□□□□□ -0.78
SMG6-215ENST00000574501 XCL2Q9UBD3 114 aa10.19□□□□□ -0.78
SMG6-215ENST00000574501 C18orf65Q6ZTR6 163 aa10.18□□□□□ -0.78
SMG6-215ENST00000574501 UBE2L6O14933 153 aa10.18□□□□□ -0.78
SMG6-215ENST00000574501 FAM19A1Q7Z5A9 133 aa10.18□□□□□ -0.78
SMG6-215ENST00000574501 C19orf84I3L1E1 186 aa10.17□□□□□ -0.78
SMG6-215ENST00000574501 UBE2E2Q96LR5 201 aa10.17□□□□□ -0.78
SMG6-215ENST00000574501 ZANQ9Y493 2812 aa10.17□□□□□ -0.78
SMG6-215ENST00000574501 A8MTW9 85 aa10.17□□□□□ -0.78
SMG6-215ENST00000574501 CCKP06307 115 aa10.17□□□□□ -0.78
SMG6-215ENST00000574501 K7EQD1 137 aa10.16□□□□□ -0.78
SMG6-215ENST00000574501 INSP01308 110 aa10.16□□□□□ -0.78
SMG6-215ENST00000574501 ORMDL1Q9P0S3 153 aa10.16□□□□□ -0.78
SMG6-215ENST00000574501 DEFB112Q30KQ8 113 aa10.16□□□□□ -0.78
SMG6-215ENST00000574501 ENHOQ6UWT2 76 aa10.16□□□□□ -0.78
SMG6-215ENST00000574501 C11orf68Q9H3H3 251 aaKnown RBP10.16□□□□□ -0.78
SMG6-215ENST00000574501 IGHV4-30-2A0A087WSY4 118 aa10.15□□□□□ -0.78
SMG6-215ENST00000574501 MAP6D1Q9H9H5 199 aa10.15□□□□□ -0.78
SMG6-215ENST00000574501 MXRA5Q9NR99 2828 aa10.15□□□□□ -0.78
SMG6-215ENST00000574501 FAM208BQ5VWN6 2430 aa10.15□□□□□ -0.78
SMG6-215ENST00000574501 ZNF462Q96JM2 2506 aa10.15□□□□□ -0.78
SMG6-215ENST00000574501 MYO18BQ8IUG5 2567 aa10.15□□□□□ -0.78
SMG6-215ENST00000574501 MSMBP08118 114 aa10.15□□□□□ -0.79
SMG6-215ENST00000574501 Q6ZTI0 123 aa10.15□□□□□ -0.79
SMG6-215ENST00000574501 C20orf197Q8N268 126 aa10.15□□□□□ -0.79
SMG6-215ENST00000574501 TMEM243Q9BU79 118 aa10.14□□□□□ -0.79
SMG6-215ENST00000574501 BBC3Q96PG8 261 aaPredicted RBP10.13□□□□□ -0.79
SMG6-215ENST00000574501 KMT2BQ9UMN6 2715 aaPredicted RBP10.12□□□□□ -0.79
SMG6-215ENST00000574501 LOC100131303A0A0U1RQF7 123 aa10.12□□□□□ -0.79
SMG6-215ENST00000574501 RNASE1P07998 156 aaKnown RBP10.12□□□□□ -0.79
SMG6-215ENST00000574501 FLNCQ14315 2725 aa10.11□□□□□ -0.79
SMG6-215ENST00000574501 TRBV10-1A0A0K0K1A3 114 aa10.11□□□□□ -0.79
SMG6-215ENST00000574501 PRB1P04280 392 aa10.11□□□□□ -0.79
SMG6-215ENST00000574501 IGLV4-60A0A075B6I1 120 aa10.11□□□□□ -0.79
SMG6-215ENST00000574501 TRBV6-4A0A1B0GX49 114 aa10.1□□□□□ -0.79
SMG6-215ENST00000574501 IBA57-AS1B1ANH7 110 aa10.1□□□□□ -0.79
SMG6-215ENST00000574501 NDUFC2O95298 119 aa10.1□□□□□ -0.79
SMG6-215ENST00000574501 PRR3P79522 188 aaKnown RBP10.1□□□□□ -0.79
SMG6-215ENST00000574501 KHDC1LQ5JSQ8 128 aa10.1□□□□□ -0.79
SMG6-215ENST00000574501 C1orf158Q8N1D5 194 aa10.1□□□□□ -0.79
SMG6-215ENST00000574501 NIPBLQ6KC79 2804 aaeCLIP10.09□□□□□ -0.79
SMG6-215ENST00000574501 XCL1P47992 114 aa10.09□□□□□ -0.79
SMG6-215ENST00000574501 S100A7L2Q5SY68 101 aa10.09□□□□□ -0.79
SMG6-215ENST00000574501 IGHV3OR16-9A0A0B4J2B5 98 aa10.08□□□□□ -0.8
SMG6-215ENST00000574501 DYNLRB2Q8TF09 96 aa10.08□□□□□ -0.8
SMG6-215ENST00000574501 CCL19Q99731 98 aa10.08□□□□□ -0.8
SMG6-215ENST00000574501 NOP10Q9NPE3 64 aaKnown RBP10.08□□□□□ -0.8
SMG6-215ENST00000574501 FAM236DA0A1B0GTK5 79 aa10.07□□□□□ -0.8
SMG6-215ENST00000574501 FAM236CP0DP71 79 aa10.07□□□□□ -0.8
SMG6-215ENST00000574501 JMJD7-PLA2G4BH0Y9G9 81 aa10.07□□□□□ -0.8
SMG6-215ENST00000574501 Q8N814 137 aa10.07□□□□□ -0.8
SMG6-215ENST00000574501 IL17DQ8TAD2 202 aa10.07□□□□□ -0.8
SMG6-215ENST00000574501 UTP20O75691 2785 aaKnown RBP10.06□□□□□ -0.8
SMG6-215ENST00000574501 NDUFC2-KCTD14E9PQ53 114 aa10.06□□□□□ -0.8
SMG6-215ENST00000574501 LY6G6DO95868 133 aa10.06□□□□□ -0.8
SMG6-215ENST00000574501 C6orf226Q5I0X4 101 aa10.06□□□□□ -0.8
SMG6-215ENST00000574501 ATP5EP2Q5VTU8 51 aa10.06□□□□□ -0.8
SMG6-215ENST00000574501 FBN2P35556 2912 aa10.06□□□□□ -0.8
SMG6-215ENST00000574501 A0A096LNT2 108 aa10.05□□□□□ -0.8
SMG6-215ENST00000574501 STHQ8IWL8 128 aa10.05□□□□□ -0.8
SMG6-215ENST00000574501 UBL5Q9BZL1 73 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms