RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 LINC00862A6NCI5 91 aa10.24□□□□□ -0.77
RAB40B-205ENST00000571880 SPINK6Q6UWN8 80 aa10.24□□□□□ -0.77
RAB40B-205ENST00000571880 A0A1B0GW15 77 aa10.23□□□□□ -0.77
RAB40B-205ENST00000571880 C10orf25Q5T742 122 aa10.23□□□□□ -0.77
RAB40B-205ENST00000571880 REG3GQ6UW15 175 aa10.23□□□□□ -0.77
RAB40B-205ENST00000571880 C2orf48Q96LS8 159 aa10.23□□□□□ -0.77
RAB40B-205ENST00000571880 FAM168BA1KXE4 195 aa10.22□□□□□ -0.77
RAB40B-205ENST00000571880 F8W036 122 aa10.22□□□□□ -0.77
RAB40B-205ENST00000571880 RPL32P62910 135 aaKnown RBP10.22□□□□□ -0.77
RAB40B-205ENST00000571880 SPANXA1Q9NS26 97 aa10.22□□□□□ -0.77
RAB40B-205ENST00000571880 PSORS1C2Q9UIG4 136 aa10.22□□□□□ -0.77
RAB40B-205ENST00000571880 LRP2P98164 4655 aa10.22□□□□□ -0.77
RAB40B-205ENST00000571880 MT-ND6P03923 174 aa10.21□□□□□ -0.77
RAB40B-205ENST00000571880 S100A8P05109 93 aa10.21□□□□□ -0.77
RAB40B-205ENST00000571880 SRSF9Q13242 221 aaKnown RBP eCLIP10.21□□□□□ -0.77
RAB40B-205ENST00000571880 OR10D4PQ8NGN7 298 aa10.21□□□□□ -0.77
RAB40B-205ENST00000571880 IGHV3OR16-9A0A0B4J2B5 98 aa10.2□□□□□ -0.78
RAB40B-205ENST00000571880 PRELID3AQ96N28 172 aa10.2□□□□□ -0.78
RAB40B-205ENST00000571880 LOC389332A0A1B0GUA5 103 aa10.19□□□□□ -0.78
RAB40B-205ENST00000571880 C1orf137Q5JT78 98 aa10.19□□□□□ -0.78
RAB40B-205ENST00000571880 ZC2HC1BQ5TFG8 222 aa10.19□□□□□ -0.78
RAB40B-205ENST00000571880 UNQ6190/PRO20217Q6UXQ8 127 aa10.19□□□□□ -0.78
RAB40B-205ENST00000571880 FAM19A5Q7Z5A7 132 aaPredicted RBP10.19□□□□□ -0.78
RAB40B-205ENST00000571880 ORMDL3Q8N138 153 aa10.19□□□□□ -0.78
RAB40B-205ENST00000571880 NDUFA1O15239 70 aa10.18□□□□□ -0.78
RAB40B-205ENST00000571880 MRPS36P82909 103 aaKnown RBP10.18□□□□□ -0.78
RAB40B-205ENST00000571880 C6orf48Q9UBA6 75 aa10.18□□□□□ -0.78
RAB40B-205ENST00000571880 IGLV4-3A0A075B6K6 122 aa10.17□□□□□ -0.78
RAB40B-205ENST00000571880 TGIF2-C20orf24A0A0A6YYL0 155 aa10.17□□□□□ -0.78
RAB40B-205ENST00000571880 RAB5AP20339 215 aa10.17□□□□□ -0.78
RAB40B-205ENST00000571880 IFI27P40305 119 aaPredicted RBP10.17□□□□□ -0.78
RAB40B-205ENST00000571880 KRTAP10-8P60410 259 aa10.17□□□□□ -0.78
RAB40B-205ENST00000571880 GAGE2EQ4V326 116 aa10.17□□□□□ -0.78
RAB40B-205ENST00000571880 TMEM136Q6ZRR5 245 aa10.17□□□□□ -0.78
RAB40B-205ENST00000571880 KRTAP11-1Q8IUC1 163 aa10.17□□□□□ -0.78
RAB40B-205ENST00000571880 MRPL35Q9NZE8 188 aaKnown RBP10.17□□□□□ -0.78
RAB40B-205ENST00000571880 GAGE2DQ9UEU5 116 aa10.17□□□□□ -0.78
RAB40B-205ENST00000571880 PPBPP02775 128 aa10.16□□□□□ -0.78
RAB40B-205ENST00000571880 C2orf82Q6UX34 121 aa10.16□□□□□ -0.78
RAB40B-205ENST00000571880 RNF151Q2KHN1 245 aa10.15□□□□□ -0.78
RAB40B-205ENST00000571880 SMDT1Q9H4I9 107 aa10.15□□□□□ -0.78
RAB40B-205ENST00000571880 RNF213Q63HN8 5207 aa10.14□□□□□ -0.79
RAB40B-205ENST00000571880 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
RAB40B-205ENST00000571880 ATP5L2Q7Z4Y8 100 aa10.14□□□□□ -0.79
RAB40B-205ENST00000571880 A0A087WZ39 114 aa10.13□□□□□ -0.79
RAB40B-205ENST00000571880 TMEM141Q96I45 108 aa10.13□□□□□ -0.79
RAB40B-205ENST00000571880 IMMP2LQ96T52 175 aa10.13□□□□□ -0.79
RAB40B-205ENST00000571880 MAP1LC3AQ9H492 121 aa10.13□□□□□ -0.79
RAB40B-205ENST00000571880 KIAA0087Q14695 138 aa10.12□□□□□ -0.79
RAB40B-205ENST00000571880 TEX43Q6ZNM6 134 aa10.11□□□□□ -0.79
RAB40B-205ENST00000571880 LINC00173Q6ZV60 143 aa10.11□□□□□ -0.79
RAB40B-205ENST00000571880 KRTAP7-1Q8IUC3 87 aa10.11□□□□□ -0.79
RAB40B-205ENST00000571880 M0QXV9 152 aa10.1□□□□□ -0.79
RAB40B-205ENST00000571880 IGLV7-43P04211 117 aa10.1□□□□□ -0.79
RAB40B-205ENST00000571880 UBE2D1P51668 147 aa10.1□□□□□ -0.79
RAB40B-205ENST00000571880 C2orf66Q6UXQ4 117 aa10.1□□□□□ -0.79
RAB40B-205ENST00000571880 PRR26Q8N8Z3 221 aa10.1□□□□□ -0.79
RAB40B-205ENST00000571880 TOMM7Q9P0U1 55 aa10.1□□□□□ -0.79
RAB40B-205ENST00000571880 CYSLTR1Q9Y271 337 aa10.1□□□□□ -0.79
RAB40B-205ENST00000571880 TLX1NBP0CAT3 122 aa10.09□□□□□ -0.79
RAB40B-205ENST00000571880 Q8N8P6 123 aa10.09□□□□□ -0.79
RAB40B-205ENST00000571880 PYGO1Q9Y3Y4 419 aa10.09□□□□□ -0.79
RAB40B-205ENST00000571880 F8WDY8 70 aa10.08□□□□□ -0.8
RAB40B-205ENST00000571880 UBE2BP63146 152 aa10.08□□□□□ -0.8
RAB40B-205ENST00000571880 C2orf88Q9BSF0 95 aa10.08□□□□□ -0.8
RAB40B-205ENST00000571880 MT-ND4LP03901 98 aa10.07□□□□□ -0.8
RAB40B-205ENST00000571880 C9orf129Q5T035 196 aaKnown RBP10.07□□□□□ -0.8
RAB40B-205ENST00000571880 Q6ZN92 141 aa10.07□□□□□ -0.8
RAB40B-205ENST00000571880 LINC00469Q8N7U9 141 aa10.07□□□□□ -0.8
RAB40B-205ENST00000571880 PACRGQ96M98 296 aaPredicted RBP10.07□□□□□ -0.8
RAB40B-205ENST00000571880 PNRC1Q12796 327 aaPredicted RBP10.06□□□□□ -0.8
RAB40B-205ENST00000571880 DIRC1Q969H9 104 aa10.06□□□□□ -0.8
RAB40B-205ENST00000571880 LAMTOR2Q9Y2Q5 125 aa10.06□□□□□ -0.8
RAB40B-205ENST00000571880 TRBV30A0A0K0K1B3 111 aa10.05□□□□□ -0.8
RAB40B-205ENST00000571880 NDUFC2-KCTD14E9PQ53 114 aa10.05□□□□□ -0.8
RAB40B-205ENST00000571880 H0Y9J4 135 aa10.05□□□□□ -0.8
RAB40B-205ENST00000571880 ANAPC16Q96DE5 110 aa10.05□□□□□ -0.8
RAB40B-205ENST00000571880 VCX2Q9H322 139 aa10.05□□□□□ -0.8
RAB40B-205ENST00000571880 PRSS47A8MTI9 375 aa10.04□□□□□ -0.8
RAB40B-205ENST00000571880 PRSS2P07478 247 aa10.04□□□□□ -0.8
RAB40B-205ENST00000571880 KIAA1644Q3SXP7 199 aa10.04□□□□□ -0.8
RAB40B-205ENST00000571880 AMELXQ99217 191 aa10.04□□□□□ -0.8
RAB40B-205ENST00000571880 CTDSP1Q9GZU7 261 aa10.04□□□□□ -0.8
RAB40B-205ENST00000571880 ORMDL2Q53FV1 153 aa10.03□□□□□ -0.8
RAB40B-205ENST00000571880 IGIPA6NJ69 53 aa10.02□□□□□ -0.81
RAB40B-205ENST00000571880 CKS1BP61024 79 aa10.02□□□□□ -0.81
RAB40B-205ENST00000571880 RAB14P61106 215 aa10.02□□□□□ -0.81
RAB40B-205ENST00000571880 XAGE1AQ9HD64 81 aa10.02□□□□□ -0.81
RAB40B-205ENST00000571880 LPAP08519 4548 aa10.01□□□□□ -0.81
RAB40B-205ENST00000571880 CDKN2A-AS1Q9UH64 79 aa10.01□□□□□ -0.81
RAB40B-205ENST00000571880 ADCYAP1P18509 176 aa10□□□□□ -0.81
RAB40B-205ENST00000571880 ALKBH7Q9BT30 221 aaPredicted RBP10□□□□□ -0.81
RAB40B-205ENST00000571880 NXT2Q9NPJ8 142 aaKnown RBP10□□□□□ -0.81
RAB40B-205ENST00000571880 KRTAP1-4P0C5Y4 121 aa9.99□□□□□ -0.81
RAB40B-205ENST00000571880 C6orf226Q5I0X4 101 aa9.99□□□□□ -0.81
RAB40B-205ENST00000571880 LINC01561Q8N1V8 128 aa9.99□□□□□ -0.81
RAB40B-205ENST00000571880 Q8IZM0 81 aa9.98□□□□□ -0.81
RAB40B-205ENST00000571880 GEMIN7Q9H840 131 aaKnown RBP9.98□□□□□ -0.81
RAB40B-205ENST00000571880 HERVK_113P63121 156 aa9.97□□□□□ -0.81
RAB40B-205ENST00000571880 TOMM6Q96B49 74 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms