RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 TIMM21Q9BVV7 248 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 NPCDR1Q9BY65 106 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 OSTCQ9NRP0 149 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 MRPL35Q9NZE8 188 aaKnown RBP1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 ZNF492Q9P255 531 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 NUP214P35658 2090 aaPredicted RBP1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 HEATR5AQ86XA9 2040 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 USF3Q68DE3 2245 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 IGHV1-69DA0A0B4J2H0 117 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 A8MUN3 132 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 PPP1R17O96001 155 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 IGLV3-27P01718 113 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 PRM2P04554 102 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 BLCAPP62952 87 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 PLGLAQ15195 96 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 SP6Q3SY56 376 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 Q6ZQT7 251 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 FAM216BQ8N7L0 139 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 DAND5Q8N907 189 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 LINC01560Q8TB33 94 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 Q96M85 177 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 C16orf95Q9H693 158 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 TGP01266 2768 aa1.91□□□□□ -2.1
HERPUD1-212ENST00000567944 DYSFO75923 2080 aa1.9□□□□□ -2.1
HERPUD1-212ENST00000567944 HEATR5BQ9P2D3 2071 aa1.9□□□□□ -2.1
HERPUD1-212ENST00000567944 CPAMD8Q8IZJ3 1885 aa1.9□□□□□ -2.1
HERPUD1-212ENST00000567944 HRNRQ86YZ3 2850 aaPredicted RBP1.9□□□□□ -2.1
HERPUD1-212ENST00000567944 FREM3P0C091 2139 aa1.9□□□□□ -2.1
HERPUD1-212ENST00000567944 TRAV13-2A0A0B4J235 113 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 TRBV10-3A0A0K0K1G6 114 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 LINC01549A6NIU2 74 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 C4orf51C9J302 202 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 HCRTO43612 131 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 PPYP01298 95 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 TRBV12-3P01733 135 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 HMGN2P05204 90 aaKnown RBP1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 CCKP06307 115 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 PIRTP0C851 137 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 PLNP26678 52 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 DYNLT1P63172 113 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 PRR3P79522 188 aaKnown RBP1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 ESRGQ1W209 222 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 C6orf99Q4VX62 202 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 C2orf82Q6UX34 121 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 ZNF826PQ6ZT77 177 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 MARCH3Q86UD3 253 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 NDUFA11Q86Y39 141 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 FAM19A2Q8N3H0 131 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 C3orf56Q8N813 242 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 DIRC1Q969H9 104 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 FXYD5Q96DB9 178 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 CAMK2N2Q96S95 79 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 SLC50A1Q9BRV3 221 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 XAGE1AQ9HD64 81 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 TAC3Q9UHF0 121 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 HHLA3Q9XRX5 114 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 KLK5Q9Y337 293 aaPredicted RBP1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 ANK3Q12955 4377 aaKnown RBP1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 CADP27708 2225 aa1.9□□□□□ -2.11
HERPUD1-212ENST00000567944 FREM1Q5H8C1 2179 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 PRR14LQ5THK1 2151 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 PLCE1Q9P212 2302 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 TRAV7A0A075B6U4 112 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 IGHV6-1A0A0B4J1U7 121 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 A0A0J9YXV3 536 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 SPTY2D1-AS1A0A0U1RR47 76 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 SMIM27A0A1W2PRY6 76 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 IBA57-AS1B1ANH7 110 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 FFAR1O14842 300 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 IFI6P09912 130 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 FCER1GP30273 86 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 ZNF80P51504 273 aaPredicted RBP1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 FXYD2P54710 66 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 DSCR4P56555 118 aaPredicted RBP1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 FXYD7P58549 80 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 KLKP1Q107X0 134 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 RHOHQ15669 191 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 Q1T7F1 81 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 Q6JHZ5 121 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 Q8N8P6 123 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 C11orf72Q8NBR9 251 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 DCANP1Q8TF63 244 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 LINC00467Q9BRT7 94 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 UPK3BQ9BT76 320 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 PLA2G12AQ9BZM1 189 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 CYP4F30PQ9H0H9 118 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 PRO1854Q9UHT4 67 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 ALPK2Q86TB3 2170 aa1.89□□□□□ -2.11
HERPUD1-212ENST00000567944 DSCAMO60469 2012 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 MALRD1Q5VYJ5 2156 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 TRBV25-1A0A075B6N4 114 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 IGKV1-8A0A0C4DH67 115 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 J3QRE1 110 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 K7ERJ3 54 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 SH2D1AO60880 128 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 ERC2-IT1O76042 136 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 IGKV1-5P01602 117 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 CD28P10747 220 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 XCL1P47992 114 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms