RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 TIMM21Q9BVV7 248 aa9.7□□□□□ -0.86
CDH3-205ENST00000566808 PPDPFQ9H3Y8 114 aa9.7□□□□□ -0.86
CDH3-205ENST00000566808 PDE6DO43924 150 aa9.68□□□□□ -0.86
CDH3-205ENST00000566808 ASB16-AS1Q495Z4 193 aa9.68□□□□□ -0.86
CDH3-205ENST00000566808 BCE1O60756 84 aa9.67□□□□□ -0.86
CDH3-205ENST00000566808 FAM229BQ4G0N7 80 aa9.67□□□□□ -0.86
CDH3-205ENST00000566808 VCYO14598 125 aa9.66□□□□□ -0.86
CDH3-205ENST00000566808 LBHQ53QV2 105 aaPredicted RBP9.66□□□□□ -0.86
CDH3-205ENST00000566808 TMEM18Q96B42 140 aa9.66□□□□□ -0.86
CDH3-205ENST00000566808 ANAPC11Q9NYG5 84 aa9.66□□□□□ -0.86
CDH3-205ENST00000566808 KIAA0087Q14695 138 aa9.65□□□□□ -0.86
CDH3-205ENST00000566808 KIR2DL4Q99706 377 aa9.65□□□□□ -0.86
CDH3-205ENST00000566808 MED9Q9NWA0 146 aa9.65□□□□□ -0.86
CDH3-205ENST00000566808 C22orf24Q9Y442 160 aa9.65□□□□□ -0.86
CDH3-205ENST00000566808 LINC00242Q5T6M2 205 aa9.64□□□□□ -0.87
CDH3-205ENST00000566808 PACRGQ96M98 296 aaPredicted RBP9.64□□□□□ -0.87
CDH3-205ENST00000566808 K7EN84 100 aa9.63□□□□□ -0.87
CDH3-205ENST00000566808 BORCS7Q96B45 105 aa9.63□□□□□ -0.87
CDH3-205ENST00000566808 TMEM191AQ9H0A3 160 aa9.63□□□□□ -0.87
CDH3-205ENST00000566808 TGIF2-C20orf24A0A0A6YYL0 155 aa9.62□□□□□ -0.87
CDH3-205ENST00000566808 SUMO2P61956 95 aaKnown RBP9.62□□□□□ -0.87
CDH3-205ENST00000566808 ZNF345Q14585 488 aa9.62□□□□□ -0.87
CDH3-205ENST00000566808 C2orf82Q6UX34 121 aa9.62□□□□□ -0.87
CDH3-205ENST00000566808 KRTAP4-1Q9BYQ7 146 aa9.62□□□□□ -0.87
CDH3-205ENST00000566808 TP73-AS1Q9UF72 201 aa9.62□□□□□ -0.87
CDH3-205ENST00000566808 IFITM10A6NMD0 228 aa9.61□□□□□ -0.87
CDH3-205ENST00000566808 PPP1R17O96001 155 aa9.61□□□□□ -0.87
CDH3-205ENST00000566808 RAB4AP20338 218 aa9.61□□□□□ -0.87
CDH3-205ENST00000566808 LINC00337Q8N6G1 96 aa9.61□□□□□ -0.87
CDH3-205ENST00000566808 IGKV2D-26A0A0A0MRZ7 120 aa9.6□□□□□ -0.87
CDH3-205ENST00000566808 A8MWL6 223 aa9.6□□□□□ -0.87
CDH3-205ENST00000566808 TEX46H3BTG2 121 aa9.6□□□□□ -0.87
CDH3-205ENST00000566808 HBBP68871 147 aa9.6□□□□□ -0.87
CDH3-205ENST00000566808 FP248Q71RG6 208 aaPredicted RBP9.6□□□□□ -0.87
CDH3-205ENST00000566808 MRPL55Q7Z7F7 128 aaKnown RBP9.6□□□□□ -0.87
CDH3-205ENST00000566808 AMN1Q8IY45 258 aa9.59□□□□□ -0.87
CDH3-205ENST00000566808 FAM104AQ969W3 186 aa9.59□□□□□ -0.87
CDH3-205ENST00000566808 SPANXA1Q9NS26 97 aa9.59□□□□□ -0.87
CDH3-205ENST00000566808 PPP1R2P9O14990 202 aa9.58□□□□□ -0.88
CDH3-205ENST00000566808 GATCO43716 136 aaKnown RBP9.58□□□□□ -0.88
CDH3-205ENST00000566808 SEC61BP60468 96 aaKnown RBP9.58□□□□□ -0.88
CDH3-205ENST00000566808 MRPS36P82909 103 aaKnown RBP9.58□□□□□ -0.88
CDH3-205ENST00000566808 KRTAP13-3Q3SY46 172 aa9.58□□□□□ -0.88
CDH3-205ENST00000566808 CT83Q5H943 113 aa9.58□□□□□ -0.88
CDH3-205ENST00000566808 NRACQ8N912 160 aa9.58□□□□□ -0.88
CDH3-205ENST00000566808 OCC1Q8TAD7 63 aa9.58□□□□□ -0.88
CDH3-205ENST00000566808 A0A1B0GUT8 65 aa9.57□□□□□ -0.88
CDH3-205ENST00000566808 ZNF727A8MUV8 499 aa9.57□□□□□ -0.88
CDH3-205ENST00000566808 SMKR1H3BMG3 65 aa9.57□□□□□ -0.88
CDH3-205ENST00000566808 RPL39P62891 51 aaKnown RBP9.57□□□□□ -0.88
CDH3-205ENST00000566808 KRTAP13-1Q8IUC0 172 aa9.57□□□□□ -0.88
CDH3-205ENST00000566808 LINC00469Q8N7U9 141 aa9.57□□□□□ -0.88
CDH3-205ENST00000566808 TCAPO15273 167 aa9.56□□□□□ -0.88
CDH3-205ENST00000566808 XAGE1AQ9HD64 81 aa9.56□□□□□ -0.88
CDH3-205ENST00000566808 KANTRA0A1W2PQU2 76 aa9.55□□□□□ -0.88
CDH3-205ENST00000566808 CFC1BP0CG36 223 aa9.55□□□□□ -0.88
CDH3-205ENST00000566808 FAM231DQ6ZW35 169 aa9.55□□□□□ -0.88
CDH3-205ENST00000566808 UBE2AP49459 152 aa9.54□□□□□ -0.88
CDH3-205ENST00000566808 HIGD1CA8MV81 97 aa9.53□□□□□ -0.88
CDH3-205ENST00000566808 LCE2CQ5TA81 110 aa9.53□□□□□ -0.88
CDH3-205ENST00000566808 KRTAP9-7A8MTY7 169 aa9.52□□□□□ -0.89
CDH3-205ENST00000566808 LINC01561Q8N1V8 128 aa9.52□□□□□ -0.89
CDH3-205ENST00000566808 RPL37AP8A6NKH3 93 aa9.51□□□□□ -0.89
CDH3-205ENST00000566808 SMLR1H3BR10 107 aa9.51□□□□□ -0.89
CDH3-205ENST00000566808 TAGLN2P37802 199 aaKnown RBP9.51□□□□□ -0.89
CDH3-205ENST00000566808 CKS1BP61024 79 aa9.51□□□□□ -0.89
CDH3-205ENST00000566808 RPL32P62910 135 aaKnown RBP9.51□□□□□ -0.89
CDH3-205ENST00000566808 SPAG11AQ6PDA7 123 aa9.51□□□□□ -0.89
CDH3-205ENST00000566808 LINC00167Q96N53 147 aa9.51□□□□□ -0.89
CDH3-205ENST00000566808 C20orf78Q9BR46 151 aa9.51□□□□□ -0.89
CDH3-205ENST00000566808 PRSS2P07478 247 aa9.5□□□□□ -0.89
CDH3-205ENST00000566808 HMSDA8MTL9 139 aa9.48□□□□□ -0.89
CDH3-205ENST00000566808 MT1HP80294 61 aa9.48□□□□□ -0.89
CDH3-205ENST00000566808 TRBV24-1A0A075B6N3 115 aa9.47□□□□□ -0.89
CDH3-205ENST00000566808 RIGQ13278 110 aa9.47□□□□□ -0.89
CDH3-205ENST00000566808 Q8IZM0 81 aa9.47□□□□□ -0.89
CDH3-205ENST00000566808 SMIM2Q9BVW6 85 aa9.47□□□□□ -0.89
CDH3-205ENST00000566808 TOMM7Q9P0U1 55 aa9.47□□□□□ -0.89
CDH3-205ENST00000566808 GAGE10A6NGK3 116 aa9.46□□□□□ -0.9
CDH3-205ENST00000566808 IFI27P40305 119 aaPredicted RBP9.46□□□□□ -0.9
CDH3-205ENST00000566808 MRPL51Q4U2R6 128 aaKnown RBP9.46□□□□□ -0.9
CDH3-205ENST00000566808 C3orf22Q8N5N4 141 aa9.46□□□□□ -0.9
CDH3-205ENST00000566808 PNRC1Q12796 327 aaPredicted RBP9.45□□□□□ -0.9
CDH3-205ENST00000566808 C6orf226Q5I0X4 101 aa9.45□□□□□ -0.9
CDH3-205ENST00000566808 IGLV4-3A0A075B6K6 122 aa9.44□□□□□ -0.9
CDH3-205ENST00000566808 LINC00862A6NCI5 91 aa9.44□□□□□ -0.9
CDH3-205ENST00000566808 F8VRH5 84 aa9.44□□□□□ -0.9
CDH3-205ENST00000566808 TNFRSF6BO95407 300 aa9.44□□□□□ -0.9
CDH3-205ENST00000566808 LORP23490 312 aaPredicted RBP9.44□□□□□ -0.9
CDH3-205ENST00000566808 KRTAP19-2Q3LHN2 52 aa9.44□□□□□ -0.9
CDH3-205ENST00000566808 Q6ZN92 141 aa9.44□□□□□ -0.9
CDH3-205ENST00000566808 IGLV5-37A0A075B6J1 123 aa9.43□□□□□ -0.9
CDH3-205ENST00000566808 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.43□□□□□ -0.9
CDH3-205ENST00000566808 TMEM250H0YL14 139 aa9.43□□□□□ -0.9
CDH3-205ENST00000566808 FAM104BQ5XKR9 115 aa9.43□□□□□ -0.9
CDH3-205ENST00000566808 TMEM141Q96I45 108 aa9.43□□□□□ -0.9
CDH3-205ENST00000566808 PYGO1Q9Y3Y4 419 aa9.43□□□□□ -0.9
CDH3-205ENST00000566808 A0A1B0GVG6 124 aa9.42□□□□□ -0.9
CDH3-205ENST00000566808 PRLHP81277 87 aa9.42□□□□□ -0.9
CDH3-205ENST00000566808 TEX43Q6ZNM6 134 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms