RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 S100A8P05109 93 aa9.21□□□□□ -0.94
RNF40-209ENST00000566703 ADIRFQ15847 76 aa9.21□□□□□ -0.94
RNF40-209ENST00000566703 IMMP2LQ96T52 175 aa9.21□□□□□ -0.94
RNF40-209ENST00000566703 SMDT1Q9H4I9 107 aa9.21□□□□□ -0.94
RNF40-209ENST00000566703 PSORS1C2Q9UIG4 136 aa9.21□□□□□ -0.94
RNF40-209ENST00000566703 F8W036 122 aa9.2□□□□□ -0.94
RNF40-209ENST00000566703 RPL18AQ02543 176 aaKnown RBP9.2□□□□□ -0.94
RNF40-209ENST00000566703 FAM104AQ969W3 186 aa9.2□□□□□ -0.94
RNF40-209ENST00000566703 OPRPNQ99935 248 aaPredicted RBP9.2□□□□□ -0.94
RNF40-209ENST00000566703 SMIM2Q9BVW6 85 aa9.2□□□□□ -0.94
RNF40-209ENST00000566703 TNXBP22105 4242 aa9.2□□□□□ -0.94
RNF40-209ENST00000566703 PPBPP02775 128 aa9.19□□□□□ -0.94
RNF40-209ENST00000566703 TLX1NBP0CAT3 122 aa9.19□□□□□ -0.94
RNF40-209ENST00000566703 RPL39P62891 51 aaKnown RBP9.19□□□□□ -0.94
RNF40-209ENST00000566703 ODF1Q14990 250 aa9.19□□□□□ -0.94
RNF40-209ENST00000566703 PEA15Q15121 130 aa9.19□□□□□ -0.94
RNF40-209ENST00000566703 C9JQL5 133 aa9.18□□□□□ -0.94
RNF40-209ENST00000566703 ORAOV1Q8WV07 137 aa9.18□□□□□ -0.94
RNF40-209ENST00000566703 NDUFA1O15239 70 aa9.17□□□□□ -0.94
RNF40-209ENST00000566703 HBBP68871 147 aa9.17□□□□□ -0.94
RNF40-209ENST00000566703 C1orf137Q5JT78 98 aa9.17□□□□□ -0.94
RNF40-209ENST00000566703 PHF5AQ7RTV0 110 aaKnown RBP9.17□□□□□ -0.94
RNF40-209ENST00000566703 A0A1B0GXF2 115 aa9.16□□□□□ -0.94
RNF40-209ENST00000566703 D6R8Y8 96 aa9.16□□□□□ -0.94
RNF40-209ENST00000566703 PYGO1Q9Y3Y4 419 aa9.16□□□□□ -0.94
RNF40-209ENST00000566703 NPYP01303 97 aa9.15□□□□□ -0.94
RNF40-209ENST00000566703 DIRC1Q969H9 104 aa9.15□□□□□ -0.94
RNF40-209ENST00000566703 A0A087WZ39 114 aa9.14□□□□□ -0.95
RNF40-209ENST00000566703 TGIF2-C20orf24A0A0A6YYL0 155 aa9.14□□□□□ -0.95
RNF40-209ENST00000566703 IFITM10A6NMD0 228 aa9.14□□□□□ -0.95
RNF40-209ENST00000566703 IGLV7-43P04211 117 aa9.14□□□□□ -0.95
RNF40-209ENST00000566703 RAB5AP20339 215 aa9.14□□□□□ -0.95
RNF40-209ENST00000566703 IFI27P40305 119 aaPredicted RBP9.14□□□□□ -0.95
RNF40-209ENST00000566703 C10orf25Q5T742 122 aa9.14□□□□□ -0.95
RNF40-209ENST00000566703 MRPL54Q6P161 138 aaKnown RBP9.14□□□□□ -0.95
RNF40-209ENST00000566703 UNQ6190/PRO20217Q6UXQ8 127 aa9.14□□□□□ -0.95
RNF40-209ENST00000566703 PRSS47A8MTI9 375 aa9.13□□□□□ -0.95
RNF40-209ENST00000566703 SRSF3P84103 164 aaKnown RBP9.13□□□□□ -0.95
RNF40-209ENST00000566703 TMEM136Q6ZRR5 245 aa9.13□□□□□ -0.95
RNF40-209ENST00000566703 ATP5L2Q7Z4Y8 100 aa9.13□□□□□ -0.95
RNF40-209ENST00000566703 ORMDL3Q8N138 153 aa9.13□□□□□ -0.95
RNF40-209ENST00000566703 C6orf48Q9UBA6 75 aa9.13□□□□□ -0.95
RNF40-209ENST00000566703 KIAA0087Q14695 138 aa9.12□□□□□ -0.95
RNF40-209ENST00000566703 LINC01561Q8N1V8 128 aa9.12□□□□□ -0.95
RNF40-209ENST00000566703 LRP2P98164 4655 aa9.12□□□□□ -0.95
RNF40-209ENST00000566703 LINC00242Q5T6M2 205 aa9.11□□□□□ -0.95
RNF40-209ENST00000566703 IGLV4-3A0A075B6K6 122 aa9.1□□□□□ -0.95
RNF40-209ENST00000566703 TRBV30A0A0K0K1B3 111 aa9.1□□□□□ -0.95
RNF40-209ENST00000566703 TMEM141Q96I45 108 aa9.1□□□□□ -0.95
RNF40-209ENST00000566703 PRELID3AQ96N28 172 aa9.1□□□□□ -0.95
RNF40-209ENST00000566703 LAMTOR2Q9Y2Q5 125 aa9.1□□□□□ -0.95
RNF40-209ENST00000566703 FAM168BA1KXE4 195 aa9.09□□□□□ -0.95
RNF40-209ENST00000566703 H0Y9J4 135 aa9.09□□□□□ -0.95
RNF40-209ENST00000566703 GAGE2EQ4V326 116 aa9.09□□□□□ -0.95
RNF40-209ENST00000566703 GAGE2DQ9UEU5 116 aa9.09□□□□□ -0.95
RNF40-209ENST00000566703 IGLV1-50A0A075B6I6 118 aa9.08□□□□□ -0.96
RNF40-209ENST00000566703 NDUFC2-KCTD14E9PQ53 114 aa9.08□□□□□ -0.96
RNF40-209ENST00000566703 IFITM2Q01629 132 aa9.08□□□□□ -0.96
RNF40-209ENST00000566703 KRTAP11-1Q8IUC1 163 aa9.08□□□□□ -0.96
RNF40-209ENST00000566703 PRR26Q8N8Z3 221 aa9.08□□□□□ -0.96
RNF40-209ENST00000566703 PACRGQ96M98 296 aaPredicted RBP9.08□□□□□ -0.96
RNF40-209ENST00000566703 NPSP0C0P6 89 aa9.07□□□□□ -0.96
RNF40-209ENST00000566703 UBE2D1P51668 147 aa9.07□□□□□ -0.96
RNF40-209ENST00000566703 TEX43Q6ZNM6 134 aa9.07□□□□□ -0.96
RNF40-209ENST00000566703 FAM19A5Q7Z5A7 132 aaPredicted RBP9.07□□□□□ -0.96
RNF40-209ENST00000566703 KRTAP7-1Q8IUC3 87 aa9.07□□□□□ -0.96
RNF40-209ENST00000566703 C2orf88Q9BSF0 95 aa9.07□□□□□ -0.96
RNF40-209ENST00000566703 MAP1LC3AQ9H492 121 aa9.07□□□□□ -0.96
RNF40-209ENST00000566703 CYSLTR1Q9Y271 337 aa9.06□□□□□ -0.96
RNF40-209ENST00000566703 K7EMI3 77 aa9.05□□□□□ -0.96
RNF40-209ENST00000566703 M0QXV9 152 aa9.05□□□□□ -0.96
RNF40-209ENST00000566703 UBE2BP63146 152 aa9.05□□□□□ -0.96
RNF40-209ENST00000566703 Q6ZN92 141 aa9.05□□□□□ -0.96
RNF40-209ENST00000566703 Q8N8P6 123 aa9.05□□□□□ -0.96
RNF40-209ENST00000566703 AMELXQ99217 191 aa9.05□□□□□ -0.96
RNF40-209ENST00000566703 LOC389332A0A1B0GUA5 103 aa9.04□□□□□ -0.96
RNF40-209ENST00000566703 PNRC1Q12796 327 aaPredicted RBP9.04□□□□□ -0.96
RNF40-209ENST00000566703 C2orf82Q6UX34 121 aa9.04□□□□□ -0.96
RNF40-209ENST00000566703 C2orf66Q6UXQ4 117 aa9.04□□□□□ -0.96
RNF40-209ENST00000566703 VCX2Q9H322 139 aa9.04□□□□□ -0.96
RNF40-209ENST00000566703 PRSS2P07478 247 aa9.03□□□□□ -0.96
RNF40-209ENST00000566703 KRTAP1-4P0C5Y4 121 aa9.03□□□□□ -0.96
RNF40-209ENST00000566703 ORMDL2Q53FV1 153 aa9.03□□□□□ -0.96
RNF40-209ENST00000566703 C9orf129Q5T035 196 aaKnown RBP9.03□□□□□ -0.96
RNF40-209ENST00000566703 FAM19A3Q7Z5A8 133 aa9.03□□□□□ -0.96
RNF40-209ENST00000566703 ANAPC16Q96DE5 110 aa9.03□□□□□ -0.96
RNF40-209ENST00000566703 MT-ND4LP03901 98 aa9.02□□□□□ -0.97
RNF40-209ENST00000566703 G0S2P27469 103 aa9.02□□□□□ -0.97
RNF40-209ENST00000566703 RPL13AP40429 203 aaKnown RBP9.02□□□□□ -0.97
RNF40-209ENST00000566703 SEC11AP67812 179 aa9.02□□□□□ -0.97
RNF40-209ENST00000566703 SLC7A5P1Q8MH63 180 aa9.02□□□□□ -0.97
RNF40-209ENST00000566703 IGIPA6NJ69 53 aa9.01□□□□□ -0.97
RNF40-209ENST00000566703 CKS1BP61024 79 aa9.01□□□□□ -0.97
RNF40-209ENST00000566703 C6orf226Q5I0X4 101 aa9.01□□□□□ -0.97
RNF40-209ENST00000566703 PAPPA-AS1Q5QFB9 102 aa9.01□□□□□ -0.97
RNF40-209ENST00000566703 LINC00173Q6ZV60 143 aa9.01□□□□□ -0.97
RNF40-209ENST00000566703 CARHSP1Q9Y2V2 147 aaKnown RBP9.01□□□□□ -0.97
RNF40-209ENST00000566703 Q8IZM0 81 aa9□□□□□ -0.97
RNF40-209ENST00000566703 NXT2Q9NPJ8 142 aaKnown RBP9□□□□□ -0.97
RNF40-209ENST00000566703 NUPR1O60356 82 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms