RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 IMMP2LQ96T52 175 aa17.11■□□□□ 0.33
UBFD1-206ENST00000566669 MRPL35Q9NZE8 188 aaKnown RBP17.11■□□□□ 0.33
UBFD1-206ENST00000566669 RPL18AQ02543 176 aaKnown RBP17.1■□□□□ 0.33
UBFD1-206ENST00000566669 C9orf116Q5BN46 136 aaPredicted RBP17.09■□□□□ 0.33
UBFD1-206ENST00000566669 A0A1W2PNN7 141 aa17.08■□□□□ 0.32
UBFD1-206ENST00000566669 MT-ND6P03923 174 aa17.08■□□□□ 0.32
UBFD1-206ENST00000566669 IGHV3OR16-9A0A0B4J2B5 98 aa17.07■□□□□ 0.32
UBFD1-206ENST00000566669 D6R8Y8 96 aa17.07■□□□□ 0.32
UBFD1-206ENST00000566669 NDUFA1O15239 70 aa17.07■□□□□ 0.32
UBFD1-206ENST00000566669 RPL39P62891 51 aaKnown RBP17.06■□□□□ 0.32
UBFD1-206ENST00000566669 ORAOV1Q8WV07 137 aa17.06■□□□□ 0.32
UBFD1-206ENST00000566669 PSORS1C2Q9UIG4 136 aa17.05■□□□□ 0.32
UBFD1-206ENST00000566669 A0A1B0GXF2 115 aa17.04■□□□□ 0.32
UBFD1-206ENST00000566669 IFITM10A6NMD0 228 aa17.04■□□□□ 0.32
UBFD1-206ENST00000566669 C9JQL5 133 aa17.04■□□□□ 0.32
UBFD1-206ENST00000566669 RAB5AP20339 215 aa17.04■□□□□ 0.32
UBFD1-206ENST00000566669 ATP5L2Q7Z4Y8 100 aa17.04■□□□□ 0.32
UBFD1-206ENST00000566669 TGIF2-C20orf24A0A0A6YYL0 155 aa17.03■□□□□ 0.32
UBFD1-206ENST00000566669 TLX1NBP0CAT3 122 aa17.03■□□□□ 0.32
UBFD1-206ENST00000566669 IFI27P40305 119 aaPredicted RBP17.03■□□□□ 0.32
UBFD1-206ENST00000566669 MRPL54Q6P161 138 aaKnown RBP17.03■□□□□ 0.32
UBFD1-206ENST00000566669 ORMDL3Q8N138 153 aa17.03■□□□□ 0.32
UBFD1-206ENST00000566669 OPRPNQ99935 248 aaPredicted RBP17.02■□□□□ 0.32
UBFD1-206ENST00000566669 NPYP01303 97 aa17.01■□□□□ 0.31
UBFD1-206ENST00000566669 PYGO1Q9Y3Y4 419 aa17.01■□□□□ 0.31
UBFD1-206ENST00000566669 LRP2P98164 4655 aa17■□□□□ 0.31
UBFD1-206ENST00000566669 FAM104AQ969W3 186 aa17■□□□□ 0.31
UBFD1-206ENST00000566669 C1orf137Q5JT78 98 aa16.99■□□□□ 0.31
UBFD1-206ENST00000566669 LAMTOR2Q9Y2Q5 125 aa16.99■□□□□ 0.31
UBFD1-206ENST00000566669 SRSF3P84103 164 aaKnown RBP16.98■□□□□ 0.31
UBFD1-206ENST00000566669 A0A087WZ39 114 aa16.97■□□□□ 0.31
UBFD1-206ENST00000566669 TMEM136Q6ZRR5 245 aa16.97■□□□□ 0.31
UBFD1-206ENST00000566669 PHF5AQ7RTV0 110 aaKnown RBP16.97■□□□□ 0.31
UBFD1-206ENST00000566669 DIRC1Q969H9 104 aa16.97■□□□□ 0.31
UBFD1-206ENST00000566669 PRELID3AQ96N28 172 aa16.96■□□□□ 0.31
UBFD1-206ENST00000566669 PRSS47A8MTI9 375 aa16.94■□□□□ 0.3
UBFD1-206ENST00000566669 LINC01561Q8N1V8 128 aa16.94■□□□□ 0.3
UBFD1-206ENST00000566669 TRBV30A0A0K0K1B3 111 aa16.93■□□□□ 0.3
UBFD1-206ENST00000566669 TMEM141Q96I45 108 aa16.93■□□□□ 0.3
UBFD1-206ENST00000566669 IGLV7-43P04211 117 aa16.92■□□□□ 0.3
UBFD1-206ENST00000566669 UNQ6190/PRO20217Q6UXQ8 127 aa16.92■□□□□ 0.3
UBFD1-206ENST00000566669 C6orf48Q9UBA6 75 aa16.92■□□□□ 0.3
UBFD1-206ENST00000566669 TEX43Q6ZNM6 134 aa16.91■□□□□ 0.3
UBFD1-206ENST00000566669 C2orf88Q9BSF0 95 aa16.91■□□□□ 0.3
UBFD1-206ENST00000566669 IGLV4-3A0A075B6K6 122 aa16.9■□□□□ 0.3
UBFD1-206ENST00000566669 NPSP0C0P6 89 aa16.9■□□□□ 0.3
UBFD1-206ENST00000566669 LINC00242Q5T6M2 205 aa16.9■□□□□ 0.3
UBFD1-206ENST00000566669 C10orf25Q5T742 122 aa16.9■□□□□ 0.3
UBFD1-206ENST00000566669 MAP1LC3AQ9H492 121 aa16.9■□□□□ 0.3
UBFD1-206ENST00000566669 PNRC1Q12796 327 aaPredicted RBP16.89■□□□□ 0.29
UBFD1-206ENST00000566669 Q6ZN92 141 aa16.89■□□□□ 0.29
UBFD1-206ENST00000566669 K7EMI3 77 aa16.88■□□□□ 0.29
UBFD1-206ENST00000566669 KIAA0087Q14695 138 aa16.88■□□□□ 0.29
UBFD1-206ENST00000566669 PACRGQ96M98 296 aaPredicted RBP16.88■□□□□ 0.29
UBFD1-206ENST00000566669 ODF1Q14990 250 aa16.87■□□□□ 0.29
UBFD1-206ENST00000566669 CYSLTR1Q9Y271 337 aa16.87■□□□□ 0.29
UBFD1-206ENST00000566669 NDUFC2-KCTD14E9PQ53 114 aa16.86■□□□□ 0.29
UBFD1-206ENST00000566669 GAGE2EQ4V326 116 aa16.86■□□□□ 0.29
UBFD1-206ENST00000566669 ANAPC16Q96DE5 110 aa16.86■□□□□ 0.29
UBFD1-206ENST00000566669 GAGE2DQ9UEU5 116 aa16.86■□□□□ 0.29
UBFD1-206ENST00000566669 H0Y9J4 135 aa16.85■□□□□ 0.29
UBFD1-206ENST00000566669 ORMDL2Q53FV1 153 aa16.85■□□□□ 0.29
UBFD1-206ENST00000566669 FAM19A5Q7Z5A7 132 aaPredicted RBP16.85■□□□□ 0.29
UBFD1-206ENST00000566669 A0A1B0GVG6 124 aa16.84■□□□□ 0.29
UBFD1-206ENST00000566669 MT-ND4LP03901 98 aa16.84■□□□□ 0.29
UBFD1-206ENST00000566669 G0S2P27469 103 aa16.84■□□□□ 0.29
UBFD1-206ENST00000566669 UBE2D1P51668 147 aa16.84■□□□□ 0.29
UBFD1-206ENST00000566669 Q8N8P6 123 aa16.84■□□□□ 0.29
UBFD1-206ENST00000566669 FAM168BA1KXE4 195 aa16.83■□□□□ 0.28
UBFD1-206ENST00000566669 M0QXV9 152 aa16.82■□□□□ 0.28
UBFD1-206ENST00000566669 PAPPA-AS1Q5QFB9 102 aa16.82■□□□□ 0.28
UBFD1-206ENST00000566669 VCX2Q9H322 139 aa16.82■□□□□ 0.28
UBFD1-206ENST00000566669 IGLV1-50A0A075B6I6 118 aa16.81■□□□□ 0.28
UBFD1-206ENST00000566669 LOC389332A0A1B0GUA5 103 aa16.81■□□□□ 0.28
UBFD1-206ENST00000566669 PRSS2P07478 247 aa16.81■□□□□ 0.28
UBFD1-206ENST00000566669 UBE2BP63146 152 aa16.81■□□□□ 0.28
UBFD1-206ENST00000566669 SEC11AP67812 179 aa16.81■□□□□ 0.28
UBFD1-206ENST00000566669 C2orf66Q6UXQ4 117 aa16.81■□□□□ 0.28
UBFD1-206ENST00000566669 RNF213Q63HN8 5207 aa16.8■□□□□ 0.28
UBFD1-206ENST00000566669 AMELXQ99217 191 aa16.79■□□□□ 0.28
UBFD1-206ENST00000566669 CKS1BP61024 79 aa16.78■□□□□ 0.28
UBFD1-206ENST00000566669 NXT2Q9NPJ8 142 aaKnown RBP16.78■□□□□ 0.28
UBFD1-206ENST00000566669 C2orf82Q6UX34 121 aa16.77■□□□□ 0.28
UBFD1-206ENST00000566669 FAM19A3Q7Z5A8 133 aa16.77■□□□□ 0.28
UBFD1-206ENST00000566669 PRR26Q8N8Z3 221 aa16.76■□□□□ 0.27
UBFD1-206ENST00000566669 C6orf226Q5I0X4 101 aa16.75■□□□□ 0.27
UBFD1-206ENST00000566669 Q8IZM0 81 aa16.75■□□□□ 0.27
UBFD1-206ENST00000566669 RPL13AP40429 203 aaKnown RBP16.74■□□□□ 0.27
UBFD1-206ENST00000566669 RAB14P61106 215 aa16.74■□□□□ 0.27
UBFD1-206ENST00000566669 HERVK_113P63121 156 aa16.74■□□□□ 0.27
UBFD1-206ENST00000566669 IGIPA6NJ69 53 aa16.73■□□□□ 0.27
UBFD1-206ENST00000566669 LINC00173Q6ZV60 143 aa16.73■□□□□ 0.27
UBFD1-206ENST00000566669 KRTAP11-1Q8IUC1 163 aa16.73■□□□□ 0.27
UBFD1-206ENST00000566669 KRTAP7-1Q8IUC3 87 aa16.73■□□□□ 0.27
UBFD1-206ENST00000566669 C9orf129Q5T035 196 aaKnown RBP16.72■□□□□ 0.27
UBFD1-206ENST00000566669 CTDSP1Q9GZU7 261 aa16.72■□□□□ 0.27
UBFD1-206ENST00000566669 LBHQ53QV2 105 aaPredicted RBP16.71■□□□□ 0.27
UBFD1-206ENST00000566669 ALKBH7Q9BT30 221 aaPredicted RBP16.71■□□□□ 0.27
UBFD1-206ENST00000566669 TOMM7Q9P0U1 55 aa16.71■□□□□ 0.27
UBFD1-206ENST00000566669 TIMM17AQ99595 171 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms