RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 CKS2P33552 79 aa7.41□□□□□ -1.22
UBR1-206ENST00000566493 ADIRFQ15847 76 aa7.41□□□□□ -1.22
UBR1-206ENST00000566493 MRPL51Q4U2R6 128 aaKnown RBP7.41□□□□□ -1.22
UBR1-206ENST00000566493 C5orf38Q86SI9 138 aa7.41□□□□□ -1.22
UBR1-206ENST00000566493 C20orf78Q9BR46 151 aa7.41□□□□□ -1.22
UBR1-206ENST00000566493 TIMM21Q9BVV7 248 aa7.41□□□□□ -1.22
UBR1-206ENST00000566493 A0A1B0GW15 77 aa7.4□□□□□ -1.22
UBR1-206ENST00000566493 RPL23P62829 140 aaKnown RBP7.4□□□□□ -1.22
UBR1-206ENST00000566493 RPL18AQ02543 176 aaKnown RBP7.4□□□□□ -1.22
UBR1-206ENST00000566493 SRSF9Q13242 221 aaKnown RBP eCLIP7.4□□□□□ -1.22
UBR1-206ENST00000566493 Q6ZUT4 128 aa7.4□□□□□ -1.22
UBR1-206ENST00000566493 NAT8Q9UHE5 227 aa7.4□□□□□ -1.22
UBR1-206ENST00000566493 SMIM27A0A1W2PRY6 76 aa7.39□□□□□ -1.23
UBR1-206ENST00000566493 ATP6V1G1O75348 118 aa7.39□□□□□ -1.23
UBR1-206ENST00000566493 S100A8P05109 93 aa7.39□□□□□ -1.23
UBR1-206ENST00000566493 SPAG11BQ08648 103 aa7.39□□□□□ -1.23
UBR1-206ENST00000566493 TRBV24-1A0A075B6N3 115 aa7.38□□□□□ -1.23
UBR1-206ENST00000566493 KRTAP4-8A0A0G2JLE6 195 aa7.38□□□□□ -1.23
UBR1-206ENST00000566493 A0A1W2PNN7 141 aa7.38□□□□□ -1.23
UBR1-206ENST00000566493 F8W036 122 aa7.38□□□□□ -1.23
UBR1-206ENST00000566493 MT-ND6P03923 174 aa7.38□□□□□ -1.23
UBR1-206ENST00000566493 KRTAP10-8P60410 259 aa7.38□□□□□ -1.23
UBR1-206ENST00000566493 RPL32P62910 135 aaKnown RBP7.38□□□□□ -1.23
UBR1-206ENST00000566493 C9orf116Q5BN46 136 aaPredicted RBP7.38□□□□□ -1.23
UBR1-206ENST00000566493 OR10D4PQ8NGN7 298 aa7.38□□□□□ -1.23
UBR1-206ENST00000566493 OPRPNQ99935 248 aaPredicted RBP7.38□□□□□ -1.23
UBR1-206ENST00000566493 F8WDY8 70 aa7.37□□□□□ -1.23
UBR1-206ENST00000566493 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.37□□□□□ -1.23
UBR1-206ENST00000566493 TNFRSF6BO95407 300 aa7.37□□□□□ -1.23
UBR1-206ENST00000566493 RPL39P62891 51 aaKnown RBP7.37□□□□□ -1.23
UBR1-206ENST00000566493 PEA15Q15121 130 aa7.37□□□□□ -1.23
UBR1-206ENST00000566493 RNF151Q2KHN1 245 aa7.37□□□□□ -1.23
UBR1-206ENST00000566493 ORAOV1Q8WV07 137 aa7.37□□□□□ -1.23
UBR1-206ENST00000566493 SPANXA1Q9NS26 97 aa7.37□□□□□ -1.23
UBR1-206ENST00000566493 D6R8Y8 96 aa7.36□□□□□ -1.23
UBR1-206ENST00000566493 ODF1Q14990 250 aa7.36□□□□□ -1.23
UBR1-206ENST00000566493 IMMP2LQ96T52 175 aa7.36□□□□□ -1.23
UBR1-206ENST00000566493 SMIM2Q9BVW6 85 aa7.36□□□□□ -1.23
UBR1-206ENST00000566493 PSORS1C2Q9UIG4 136 aa7.36□□□□□ -1.23
UBR1-206ENST00000566493 IFITM10A6NMD0 228 aa7.35□□□□□ -1.23
UBR1-206ENST00000566493 NDUFA1O15239 70 aa7.35□□□□□ -1.23
UBR1-206ENST00000566493 HBBP68871 147 aa7.35□□□□□ -1.23
UBR1-206ENST00000566493 C1orf137Q5JT78 98 aa7.35□□□□□ -1.23
UBR1-206ENST00000566493 MRPL54Q6P161 138 aaKnown RBP7.35□□□□□ -1.23
UBR1-206ENST00000566493 PHF5AQ7RTV0 110 aaKnown RBP7.35□□□□□ -1.23
UBR1-206ENST00000566493 SMDT1Q9H4I9 107 aa7.35□□□□□ -1.23
UBR1-206ENST00000566493 MRPL35Q9NZE8 188 aaKnown RBP7.35□□□□□ -1.23
UBR1-206ENST00000566493 C9JQL5 133 aa7.34□□□□□ -1.23
UBR1-206ENST00000566493 PPBPP02775 128 aa7.34□□□□□ -1.23
UBR1-206ENST00000566493 RAB5AP20339 215 aa7.34□□□□□ -1.23
UBR1-206ENST00000566493 MRPS36P82909 103 aaKnown RBP7.34□□□□□ -1.23
UBR1-206ENST00000566493 TMA7Q9Y2S6 64 aaKnown RBP7.34□□□□□ -1.23
UBR1-206ENST00000566493 LRP2P98164 4655 aa7.34□□□□□ -1.23
UBR1-206ENST00000566493 TGIF2-C20orf24A0A0A6YYL0 155 aa7.33□□□□□ -1.24
UBR1-206ENST00000566493 IGHV3OR16-9A0A0B4J2B5 98 aa7.33□□□□□ -1.24
UBR1-206ENST00000566493 NPYP01303 97 aa7.33□□□□□ -1.24
UBR1-206ENST00000566493 IFI27P40305 119 aaPredicted RBP7.33□□□□□ -1.24
UBR1-206ENST00000566493 SRSF3P84103 164 aaKnown RBP7.33□□□□□ -1.24
UBR1-206ENST00000566493 ORMDL3Q8N138 153 aa7.32□□□□□ -1.24
UBR1-206ENST00000566493 FAM104AQ969W3 186 aa7.32□□□□□ -1.24
UBR1-206ENST00000566493 A0A087WZ39 114 aa7.31□□□□□ -1.24
UBR1-206ENST00000566493 A0A1B0GXF2 115 aa7.31□□□□□ -1.24
UBR1-206ENST00000566493 TLX1NBP0CAT3 122 aa7.31□□□□□ -1.24
UBR1-206ENST00000566493 UNQ6190/PRO20217Q6UXQ8 127 aa7.31□□□□□ -1.24
UBR1-206ENST00000566493 TMEM136Q6ZRR5 245 aa7.31□□□□□ -1.24
UBR1-206ENST00000566493 DIRC1Q969H9 104 aa7.31□□□□□ -1.24
UBR1-206ENST00000566493 IGLV7-43P04211 117 aa7.3□□□□□ -1.24
UBR1-206ENST00000566493 GAGE2EQ4V326 116 aa7.3□□□□□ -1.24
UBR1-206ENST00000566493 C10orf25Q5T742 122 aa7.3□□□□□ -1.24
UBR1-206ENST00000566493 ATP5L2Q7Z4Y8 100 aa7.3□□□□□ -1.24
UBR1-206ENST00000566493 PRELID3AQ96N28 172 aa7.3□□□□□ -1.24
UBR1-206ENST00000566493 C6orf48Q9UBA6 75 aa7.3□□□□□ -1.24
UBR1-206ENST00000566493 GAGE2DQ9UEU5 116 aa7.3□□□□□ -1.24
UBR1-206ENST00000566493 FAM168BA1KXE4 195 aa7.29□□□□□ -1.24
UBR1-206ENST00000566493 FAM19A5Q7Z5A7 132 aaPredicted RBP7.29□□□□□ -1.24
UBR1-206ENST00000566493 PYGO1Q9Y3Y4 419 aa7.29□□□□□ -1.24
UBR1-206ENST00000566493 IGLV4-3A0A075B6K6 122 aa7.28□□□□□ -1.24
UBR1-206ENST00000566493 LOC389332A0A1B0GUA5 103 aa7.28□□□□□ -1.24
UBR1-206ENST00000566493 TEX43Q6ZNM6 134 aa7.28□□□□□ -1.24
UBR1-206ENST00000566493 TMEM141Q96I45 108 aa7.28□□□□□ -1.24
UBR1-206ENST00000566493 PACRGQ96M98 296 aaPredicted RBP7.28□□□□□ -1.24
UBR1-206ENST00000566493 C2orf88Q9BSF0 95 aa7.28□□□□□ -1.24
UBR1-206ENST00000566493 MAP1LC3AQ9H492 121 aa7.28□□□□□ -1.24
UBR1-206ENST00000566493 TRBV30A0A0K0K1B3 111 aa7.27□□□□□ -1.25
UBR1-206ENST00000566493 UBE2BP63146 152 aa7.27□□□□□ -1.25
UBR1-206ENST00000566493 LINC00242Q5T6M2 205 aa7.27□□□□□ -1.25
UBR1-206ENST00000566493 Q6ZN92 141 aa7.27□□□□□ -1.25
UBR1-206ENST00000566493 LAMTOR2Q9Y2Q5 125 aa7.27□□□□□ -1.25
UBR1-206ENST00000566493 H0Y9J4 135 aa7.26□□□□□ -1.25
UBR1-206ENST00000566493 S100A1P23297 94 aa7.26□□□□□ -1.25
UBR1-206ENST00000566493 KIAA0087Q14695 138 aa7.26□□□□□ -1.25
UBR1-206ENST00000566493 NDUFA5Q16718 116 aa7.26□□□□□ -1.25
UBR1-206ENST00000566493 CYSLTR1Q9Y271 337 aa7.26□□□□□ -1.25
UBR1-206ENST00000566493 PRSS47A8MTI9 375 aa7.25□□□□□ -1.25
UBR1-206ENST00000566493 NDUFC2-KCTD14E9PQ53 114 aa7.25□□□□□ -1.25
UBR1-206ENST00000566493 M0QXV9 152 aa7.25□□□□□ -1.25
UBR1-206ENST00000566493 PRSS2P07478 247 aa7.25□□□□□ -1.25
UBR1-206ENST00000566493 UBE2D1P51668 147 aa7.25□□□□□ -1.25
UBR1-206ENST00000566493 LINC01561Q8N1V8 128 aa7.25□□□□□ -1.25
UBR1-206ENST00000566493 PRR26Q8N8Z3 221 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms