RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 ZNF25P17030 456 aaPredicted RBP10.49□□□□□ -0.73
TSR3-202ENST00000566296 AMMECR1LQ6DCA0 310 aa10.49□□□□□ -0.73
TSR3-202ENST00000566296 C1orf196B1AJZ1 125 aa10.48□□□□□ -0.73
TSR3-202ENST00000566296 SLPIP03973 132 aa10.48□□□□□ -0.73
TSR3-202ENST00000566296 FGF6P10767 208 aa10.48□□□□□ -0.73
TSR3-202ENST00000566296 MRPL52Q86TS9 123 aaKnown RBP10.48□□□□□ -0.73
TSR3-202ENST00000566296 BAGE3Q86Y29 109 aa10.48□□□□□ -0.73
TSR3-202ENST00000566296 IGKV3OR2-268A0A0C4DH90 116 aa10.47□□□□□ -0.73
TSR3-202ENST00000566296 GAGE12HA6NDE8 117 aa10.47□□□□□ -0.73
TSR3-202ENST00000566296 RNASEKQ6P5S7 137 aaKnown RBP10.47□□□□□ -0.73
TSR3-202ENST00000566296 CHCHD1Q96BP2 118 aaKnown RBP10.47□□□□□ -0.73
TSR3-202ENST00000566296 URB1-AS1Q96HZ7 61 aa10.47□□□□□ -0.73
TSR3-202ENST00000566296 TMEM101Q96IK0 257 aa10.47□□□□□ -0.73
TSR3-202ENST00000566296 PLAC8Q9NZF1 115 aa10.47□□□□□ -0.73
TSR3-202ENST00000566296 CYSLTR1Q9Y271 337 aa10.47□□□□□ -0.73
TSR3-202ENST00000566296 TNXBP22105 4242 aa10.47□□□□□ -0.73
TSR3-202ENST00000566296 LINC01549A6NIU2 74 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 HIST1H2BKO60814 126 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 HIST1H2BJP06899 126 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 HIST1H2BOP23527 126 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 HIST1H2BBP33778 126 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 HIST1H2BDP58876 126 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 HIST1H2BCP62807 126 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 HIST2H2BEQ16778 126 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.46□□□□□ -0.73
TSR3-202ENST00000566296 C15orf56Q8N910 161 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 HIST1H2BHQ93079 126 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 HIST1H2BNQ99877 126 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 HIST1H2BMQ99879 126 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 TIMM21Q9BVV7 248 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 UBE2D4Q9Y2X8 147 aa10.46□□□□□ -0.73
TSR3-202ENST00000566296 CSDC2Q9Y534 153 aaKnown RBP10.46□□□□□ -0.73
TSR3-202ENST00000566296 RPL39P62891 51 aaKnown RBP10.45□□□□□ -0.74
TSR3-202ENST00000566296 C2orf66Q6UXQ4 117 aa10.45□□□□□ -0.74
TSR3-202ENST00000566296 OR5A1Q8NGJ0 315 aa10.45□□□□□ -0.74
TSR3-202ENST00000566296 SPANXA1Q9NS26 97 aa10.45□□□□□ -0.74
TSR3-202ENST00000566296 COX6A2Q02221 97 aa10.44□□□□□ -0.74
TSR3-202ENST00000566296 MAJINQ3KP22 176 aa10.44□□□□□ -0.74
TSR3-202ENST00000566296 HIGD2BQ4VC39 106 aa10.44□□□□□ -0.74
TSR3-202ENST00000566296 PYGO1Q9Y3Y4 419 aa10.44□□□□□ -0.74
TSR3-202ENST00000566296 IGKV2-24A0A0C4DH68 120 aa10.43□□□□□ -0.74
TSR3-202ENST00000566296 HSBP1O75506 76 aa10.43□□□□□ -0.74
TSR3-202ENST00000566296 CHCHD10Q8WYQ3 142 aaPredicted RBP10.43□□□□□ -0.74
TSR3-202ENST00000566296 TOMM6Q96B49 74 aa10.43□□□□□ -0.74
TSR3-202ENST00000566296 HBDP02042 147 aa10.42□□□□□ -0.74
TSR3-202ENST00000566296 PKIGQ9Y2B9 76 aa10.42□□□□□ -0.74
TSR3-202ENST00000566296 LRP2P98164 4655 aa10.41□□□□□ -0.74
TSR3-202ENST00000566296 SERF1AO75920 110 aa10.41□□□□□ -0.74
TSR3-202ENST00000566296 NPSP0C0P6 89 aa10.41□□□□□ -0.74
TSR3-202ENST00000566296 MRPS36P82909 103 aaKnown RBP10.41□□□□□ -0.74
TSR3-202ENST00000566296 ZNF664Q8N3J9 261 aa10.41□□□□□ -0.74
TSR3-202ENST00000566296 CDC42SE2Q9NRR3 84 aa10.41□□□□□ -0.74
TSR3-202ENST00000566296 GVQW2A0A096LPI5 108 aaPredicted RBP10.4□□□□□ -0.74
TSR3-202ENST00000566296 PRR3P79522 188 aaKnown RBP10.4□□□□□ -0.74
TSR3-202ENST00000566296 STPG4Q8N801 248 aa10.4□□□□□ -0.74
TSR3-202ENST00000566296 TIMM17AQ99595 171 aa10.4□□□□□ -0.74
TSR3-202ENST00000566296 A0A096LNJ9 63 aa10.39□□□□□ -0.75
TSR3-202ENST00000566296 IGIPA6NJ69 53 aa10.39□□□□□ -0.75
TSR3-202ENST00000566296 LINC00310P59036 64 aa10.39□□□□□ -0.75
TSR3-202ENST00000566296 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
TSR3-202ENST00000566296 PAPPA-AS1Q5QFB9 102 aa10.39□□□□□ -0.75
TSR3-202ENST00000566296 ERASQ7Z444 233 aa10.39□□□□□ -0.75
TSR3-202ENST00000566296 TMEM141Q96I45 108 aa10.39□□□□□ -0.75
TSR3-202ENST00000566296 SCGB3A1Q96QR1 104 aa10.39□□□□□ -0.75
TSR3-202ENST00000566296 PMCHL1Q16048 86 aa10.38□□□□□ -0.75
TSR3-202ENST00000566296 Q6ZN92 141 aa10.38□□□□□ -0.75
TSR3-202ENST00000566296 Q6ZUT4 128 aa10.38□□□□□ -0.75
TSR3-202ENST00000566296 IGLV4-3A0A075B6K6 122 aa10.37□□□□□ -0.75
TSR3-202ENST00000566296 NDUFA6P56556 154 aa10.37□□□□□ -0.75
TSR3-202ENST00000566296 PDZD11Q5EBL8 140 aa10.37□□□□□ -0.75
TSR3-202ENST00000566296 LINC00474Q9P2X8 69 aa10.37□□□□□ -0.75
TSR3-202ENST00000566296 A0A096LNI7 61 aa10.36□□□□□ -0.75
TSR3-202ENST00000566296 NUPR1O60356 82 aa10.36□□□□□ -0.75
TSR3-202ENST00000566296 ATP5LO75964 103 aa10.36□□□□□ -0.75
TSR3-202ENST00000566296 FOXI1Q12951 378 aa10.36□□□□□ -0.75
TSR3-202ENST00000566296 FAM19A2Q8N3H0 131 aa10.36□□□□□ -0.75
TSR3-202ENST00000566296 LINC01600Q96MT4 127 aa10.36□□□□□ -0.75
TSR3-202ENST00000566296 OPRPNQ99935 248 aaPredicted RBP10.36□□□□□ -0.75
TSR3-202ENST00000566296 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.35□□□□□ -0.75
TSR3-202ENST00000566296 CCL25O15444 150 aa10.35□□□□□ -0.75
TSR3-202ENST00000566296 XCL1P47992 114 aa10.35□□□□□ -0.75
TSR3-202ENST00000566296 TEX43Q6ZNM6 134 aa10.35□□□□□ -0.75
TSR3-202ENST00000566296 FAM104AQ969W3 186 aa10.35□□□□□ -0.75
TSR3-202ENST00000566296 CARD19Q96LW7 228 aa10.35□□□□□ -0.75
TSR3-202ENST00000566296 VCX2Q9H322 139 aa10.35□□□□□ -0.75
TSR3-202ENST00000566296 IGHV1-58A0A0C4DH39 117 aa10.34□□□□□ -0.75
TSR3-202ENST00000566296 RNASE13Q5GAN3 156 aaKnown RBP10.34□□□□□ -0.75
TSR3-202ENST00000566296 REG3GQ6UW15 175 aa10.34□□□□□ -0.75
TSR3-202ENST00000566296 AMELXQ99217 191 aa10.34□□□□□ -0.75
TSR3-202ENST00000566296 C2orf88Q9BSF0 95 aa10.34□□□□□ -0.75
TSR3-202ENST00000566296 LINC00959A0A1B0GUT2 108 aa10.33□□□□□ -0.76
TSR3-202ENST00000566296 IFITM10A6NMD0 228 aa10.33□□□□□ -0.76
TSR3-202ENST00000566296 LEPROTL1O95214 131 aa10.33□□□□□ -0.76
TSR3-202ENST00000566296 SS18Q15532 418 aa10.33□□□□□ -0.76
TSR3-202ENST00000566296 S100A6P06703 90 aa10.32□□□□□ -0.76
TSR3-202ENST00000566296 TRAV13-1A0A0B4J241 112 aa10.31□□□□□ -0.76
TSR3-202ENST00000566296 A0A0J9YXV3 536 aa10.31□□□□□ -0.76
TSR3-202ENST00000566296 SPINK6Q6UWN8 80 aa10.31□□□□□ -0.76
TSR3-202ENST00000566296 LINC00173Q6ZV60 143 aa10.31□□□□□ -0.76
TSR3-202ENST00000566296 PACRGQ96M98 296 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms