RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 Q6ZN92 141 aa10.62□□□□□ -0.71
USB1-211ENST00000565662 PRSS3P2Q8NHM4 247 aa10.62□□□□□ -0.71
USB1-211ENST00000565662 CAMK2N2Q96S95 79 aa10.62□□□□□ -0.71
USB1-211ENST00000565662 LINC01549A6NIU2 74 aa10.61□□□□□ -0.71
USB1-211ENST00000565662 CHTF8P0CG12 524 aa10.61□□□□□ -0.71
USB1-211ENST00000565662 RNF151Q2KHN1 245 aa10.61□□□□□ -0.71
USB1-211ENST00000565662 PAPPA-AS1Q5QFB9 102 aa10.61□□□□□ -0.71
USB1-211ENST00000565662 STPG4Q8N801 248 aa10.61□□□□□ -0.71
USB1-211ENST00000565662 C2orf88Q9BSF0 95 aa10.61□□□□□ -0.71
USB1-211ENST00000565662 NXT2Q9NPJ8 142 aaKnown RBP10.61□□□□□ -0.71
USB1-211ENST00000565662 CYSLTR1Q9Y271 337 aa10.61□□□□□ -0.71
USB1-211ENST00000565662 RPL39P62891 51 aaKnown RBP10.6□□□□□ -0.71
USB1-211ENST00000565662 A0A096LNI7 61 aa10.59□□□□□ -0.71
USB1-211ENST00000565662 S100PP25815 95 aa10.59□□□□□ -0.71
USB1-211ENST00000565662 SPAG11BQ08648 103 aa10.59□□□□□ -0.71
USB1-211ENST00000565662 COX19Q49B96 90 aa10.59□□□□□ -0.71
USB1-211ENST00000565662 SERTAD4-AS1Q5TG53 156 aa10.59□□□□□ -0.71
USB1-211ENST00000565662 Q8N8P6 123 aa10.59□□□□□ -0.71
USB1-211ENST00000565662 TMEM141Q96I45 108 aa10.59□□□□□ -0.71
USB1-211ENST00000565662 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
USB1-211ENST00000565662 TEX43Q6ZNM6 134 aa10.58□□□□□ -0.72
USB1-211ENST00000565662 LINC01561Q8N1V8 128 aa10.58□□□□□ -0.72
USB1-211ENST00000565662 IGHV3OR16-9A0A0B4J2B5 98 aa10.57□□□□□ -0.72
USB1-211ENST00000565662 NDUFA1O15239 70 aa10.57□□□□□ -0.72
USB1-211ENST00000565662 PTTG1IPP53801 180 aa10.57□□□□□ -0.72
USB1-211ENST00000565662 SEC11AP67812 179 aa10.57□□□□□ -0.72
USB1-211ENST00000565662 C5orf38Q86SI9 138 aa10.57□□□□□ -0.72
USB1-211ENST00000565662 SEC11CQ9BY50 192 aa10.57□□□□□ -0.72
USB1-211ENST00000565662 MRPL35Q9NZE8 188 aaKnown RBP10.57□□□□□ -0.72
USB1-211ENST00000565662 TMEM218A2RU14 115 aa10.56□□□□□ -0.72
USB1-211ENST00000565662 ORAOV1Q8WV07 137 aa10.56□□□□□ -0.72
USB1-211ENST00000565662 IGLV4-3A0A075B6K6 122 aa10.55□□□□□ -0.72
USB1-211ENST00000565662 A0A087WZ39 114 aa10.54□□□□□ -0.72
USB1-211ENST00000565662 C2orf66Q6UXQ4 117 aa10.54□□□□□ -0.72
USB1-211ENST00000565662 LOC389332A0A1B0GUA5 103 aa10.53□□□□□ -0.72
USB1-211ENST00000565662 MT-ND6P03923 174 aa10.53□□□□□ -0.72
USB1-211ENST00000565662 Q6ZRP5 223 aa10.53□□□□□ -0.72
USB1-211ENST00000565662 LINC00526Q96FQ7 95 aa10.53□□□□□ -0.72
USB1-211ENST00000565662 HERC1Q15751 4861 aa10.53□□□□□ -0.72
USB1-211ENST00000565662 PRR3P79522 188 aaKnown RBP10.52□□□□□ -0.73
USB1-211ENST00000565662 RPL18AQ02543 176 aaKnown RBP10.52□□□□□ -0.73
USB1-211ENST00000565662 GAGE2BQ13066 116 aa10.52□□□□□ -0.73
USB1-211ENST00000565662 VCX2Q9H322 139 aa10.52□□□□□ -0.73
USB1-211ENST00000565662 TRBV30A0A0K0K1B3 111 aa10.51□□□□□ -0.73
USB1-211ENST00000565662 TLX1NBP0CAT3 122 aa10.51□□□□□ -0.73
USB1-211ENST00000565662 RHEBQ15382 184 aa10.51□□□□□ -0.73
USB1-211ENST00000565662 TIMM17AQ99595 171 aa10.51□□□□□ -0.73
USB1-211ENST00000565662 GNB1LQ9BYB4 327 aa10.51□□□□□ -0.73
USB1-211ENST00000565662 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.5□□□□□ -0.73
USB1-211ENST00000565662 HERVK_113P63121 156 aa10.5□□□□□ -0.73
USB1-211ENST00000565662 LINC00242Q5T6M2 205 aa10.5□□□□□ -0.73
USB1-211ENST00000565662 FAM104AQ969W3 186 aa10.5□□□□□ -0.73
USB1-211ENST00000565662 AMELXQ99217 191 aa10.5□□□□□ -0.73
USB1-211ENST00000565662 ADCYAP1P18509 176 aa10.49□□□□□ -0.73
USB1-211ENST00000565662 UBE2D1P51668 147 aa10.49□□□□□ -0.73
USB1-211ENST00000565662 FAM19A3Q7Z5A8 133 aa10.49□□□□□ -0.73
USB1-211ENST00000565662 OPRPNQ99935 248 aaPredicted RBP10.49□□□□□ -0.73
USB1-211ENST00000565662 PRSS2P07478 247 aa10.48□□□□□ -0.73
USB1-211ENST00000565662 REG3GQ6UW15 175 aa10.48□□□□□ -0.73
USB1-211ENST00000565662 SPINK6Q6UWN8 80 aa10.48□□□□□ -0.73
USB1-211ENST00000565662 PACRGQ96M98 296 aaPredicted RBP10.48□□□□□ -0.73
USB1-211ENST00000565662 HNRNPA3P51991 378 aaKnown RBP10.47□□□□□ -0.73
USB1-211ENST00000565662 COMMD7Q86VX2 200 aa10.47□□□□□ -0.73
USB1-211ENST00000565662 TOMM6Q96B49 74 aa10.47□□□□□ -0.73
USB1-211ENST00000565662 IGIPA6NJ69 53 aa10.46□□□□□ -0.73
USB1-211ENST00000565662 IFITM2Q01629 132 aa10.46□□□□□ -0.73
USB1-211ENST00000565662 CXCL5P42830 114 aa10.45□□□□□ -0.74
USB1-211ENST00000565662 C9orf116Q5BN46 136 aaPredicted RBP10.45□□□□□ -0.74
USB1-211ENST00000565662 ERASQ7Z444 233 aa10.45□□□□□ -0.74
USB1-211ENST00000565662 GEMIN7Q9H840 131 aaKnown RBP10.45□□□□□ -0.74
USB1-211ENST00000565662 CARHSP1Q9Y2V2 147 aaKnown RBP10.45□□□□□ -0.74
USB1-211ENST00000565662 NDUFA5Q16718 116 aa10.44□□□□□ -0.74
USB1-211ENST00000565662 C10orf91Q5T1B1 145 aa10.44□□□□□ -0.74
USB1-211ENST00000565662 Q8IZM0 81 aa10.44□□□□□ -0.74
USB1-211ENST00000565662 CKS1BP61024 79 aa10.43□□□□□ -0.74
USB1-211ENST00000565662 ODF1Q14990 250 aa10.43□□□□□ -0.74
USB1-211ENST00000565662 LINC00173Q6ZV60 143 aa10.43□□□□□ -0.74
USB1-211ENST00000565662 SMCO4Q9NRQ5 59 aa10.43□□□□□ -0.74
USB1-211ENST00000565662 PKHD1L1Q86WI1 4243 aa10.42□□□□□ -0.74
USB1-211ENST00000565662 LINC01546A6NGU7 62 aa10.42□□□□□ -0.74
USB1-211ENST00000565662 NDUFC2-KCTD14E9PQ53 114 aa10.42□□□□□ -0.74
USB1-211ENST00000565662 KIAA0087Q14695 138 aa10.42□□□□□ -0.74
USB1-211ENST00000565662 SCGB3A1Q96QR1 104 aa10.42□□□□□ -0.74
USB1-211ENST00000565662 FA2HQ7L5A8 372 aa10.41□□□□□ -0.74
USB1-211ENST00000565662 C6orf48Q9UBA6 75 aa10.41□□□□□ -0.74
USB1-211ENST00000565662 C6orf226Q5I0X4 101 aa10.4□□□□□ -0.74
USB1-211ENST00000565662 UNQ6190/PRO20217Q6UXQ8 127 aa10.4□□□□□ -0.74
USB1-211ENST00000565662 LINC01600Q96MT4 127 aa10.4□□□□□ -0.74
USB1-211ENST00000565662 ALKBH7Q9BT30 221 aaPredicted RBP10.4□□□□□ -0.74
USB1-211ENST00000565662 RPS10P5Q9NQ39 176 aa10.4□□□□□ -0.74
USB1-211ENST00000565662 FAT3Q8TDW7 4589 aa10.4□□□□□ -0.74
USB1-211ENST00000565662 LRP1Q07954 4544 aaKnown RBP10.4□□□□□ -0.75
USB1-211ENST00000565662 A0A1W2PNN7 141 aa10.39□□□□□ -0.75
USB1-211ENST00000565662 KIAA1644Q3SXP7 199 aa10.39□□□□□ -0.75
USB1-211ENST00000565662 PLA2G2DQ9UNK4 145 aa10.39□□□□□ -0.75
USB1-211ENST00000565662 A0A0J9YXV3 536 aa10.38□□□□□ -0.75
USB1-211ENST00000565662 TINCRA0A1B0GVN0 87 aa10.38□□□□□ -0.75
USB1-211ENST00000565662 FABP9Q0Z7S8 132 aa10.38□□□□□ -0.75
USB1-211ENST00000565662 SVBPQ8N300 66 aa10.38□□□□□ -0.75
USB1-211ENST00000565662 MRPL18Q9H0U6 180 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms