RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 Q8N8P6 123 aa9.41□□□□□ -0.9
SNX29-203ENST00000564111 NXT2Q9NPJ8 142 aaKnown RBP9.41□□□□□ -0.9
SNX29-203ENST00000564111 PKHD1L1Q86WI1 4243 aa9.41□□□□□ -0.9
SNX29-203ENST00000564111 TGIF2-C20orf24A0A0A6YYL0 155 aa9.4□□□□□ -0.9
SNX29-203ENST00000564111 COX19Q49B96 90 aa9.4□□□□□ -0.9
SNX29-203ENST00000564111 CAMK2N2Q96S95 79 aa9.4□□□□□ -0.9
SNX29-203ENST00000564111 C2orf88Q9BSF0 95 aa9.4□□□□□ -0.9
SNX29-203ENST00000564111 CHTF8P0CG12 524 aa9.4□□□□□ -0.91
SNX29-203ENST00000564111 LINC01561Q8N1V8 128 aa9.4□□□□□ -0.91
SNX29-203ENST00000564111 CYSLTR1Q9Y271 337 aa9.4□□□□□ -0.91
SNX29-203ENST00000564111 LINC01549A6NIU2 74 aa9.39□□□□□ -0.91
SNX29-203ENST00000564111 S100PP25815 95 aa9.39□□□□□ -0.91
SNX29-203ENST00000564111 RPL39P62891 51 aaKnown RBP9.39□□□□□ -0.91
SNX29-203ENST00000564111 SPAG11BQ08648 103 aa9.39□□□□□ -0.91
SNX29-203ENST00000564111 PAPPA-AS1Q5QFB9 102 aa9.39□□□□□ -0.91
SNX29-203ENST00000564111 Q6ZN92 141 aa9.39□□□□□ -0.91
SNX29-203ENST00000564111 PRSS3P2Q8NHM4 247 aa9.39□□□□□ -0.91
SNX29-203ENST00000564111 SRRM2Q9UQ35 2752 aaKnown RBP9.39□□□□□ -0.91
SNX29-203ENST00000564111 IGKV2-24A0A0C4DH68 120 aa9.39□□□□□ -0.91
SNX29-203ENST00000564111 STPG4Q8N801 248 aa9.39□□□□□ -0.91
SNX29-203ENST00000564111 TMEM141Q96I45 108 aa9.39□□□□□ -0.91
SNX29-203ENST00000564111 DMBT1Q9UGM3 2413 aaPredicted RBP9.39□□□□□ -0.91
SNX29-203ENST00000564111 A0A096LNI7 61 aa9.38□□□□□ -0.91
SNX29-203ENST00000564111 TMEM218A2RU14 115 aa9.38□□□□□ -0.91
SNX29-203ENST00000564111 SEC11CQ9BY50 192 aa9.38□□□□□ -0.91
SNX29-203ENST00000564111 RNASE13Q5GAN3 156 aaKnown RBP9.37□□□□□ -0.91
SNX29-203ENST00000564111 TEX43Q6ZNM6 134 aa9.37□□□□□ -0.91
SNX29-203ENST00000564111 PTTG1IPP53801 180 aa9.37□□□□□ -0.91
SNX29-203ENST00000564111 NDUFA1O15239 70 aa9.36□□□□□ -0.91
SNX29-203ENST00000564111 C5orf38Q86SI9 138 aa9.36□□□□□ -0.91
SNX29-203ENST00000564111 ORAOV1Q8WV07 137 aa9.36□□□□□ -0.91
SNX29-203ENST00000564111 MRPL35Q9NZE8 188 aaKnown RBP9.36□□□□□ -0.91
SNX29-203ENST00000564111 IGLV4-3A0A075B6K6 122 aa9.35□□□□□ -0.91
SNX29-203ENST00000564111 IGHV3OR16-9A0A0B4J2B5 98 aa9.35□□□□□ -0.91
SNX29-203ENST00000564111 SEC11AP67812 179 aa9.35□□□□□ -0.91
SNX29-203ENST00000564111 LOC389332A0A1B0GUA5 103 aa9.34□□□□□ -0.91
SNX29-203ENST00000564111 SERTAD4-AS1Q5TG53 156 aa9.34□□□□□ -0.91
SNX29-203ENST00000564111 C2orf66Q6UXQ4 117 aa9.34□□□□□ -0.91
SNX29-203ENST00000564111 FLG2Q5D862 2391 aaPredicted RBP9.34□□□□□ -0.91
SNX29-203ENST00000564111 A0A087WZ39 114 aa9.33□□□□□ -0.92
SNX29-203ENST00000564111 MT-ND6P03923 174 aa9.33□□□□□ -0.92
SNX29-203ENST00000564111 LINC00526Q96FQ7 95 aa9.33□□□□□ -0.92
SNX29-203ENST00000564111 VCX2Q9H322 139 aa9.33□□□□□ -0.92
SNX29-203ENST00000564111 PRR3P79522 188 aaKnown RBP9.32□□□□□ -0.92
SNX29-203ENST00000564111 RHEBQ15382 184 aa9.32□□□□□ -0.92
SNX29-203ENST00000564111 COMMD7Q86VX2 200 aa9.32□□□□□ -0.92
SNX29-203ENST00000564111 FAM104AQ969W3 186 aa9.32□□□□□ -0.92
SNX29-203ENST00000564111 GNB1LQ9BYB4 327 aa9.32□□□□□ -0.92
SNX29-203ENST00000564111 TLX1NBP0CAT3 122 aa9.32□□□□□ -0.92
SNX29-203ENST00000564111 FAM19A3Q7Z5A8 133 aa9.32□□□□□ -0.92
SNX29-203ENST00000564111 TIMM17AQ99595 171 aa9.32□□□□□ -0.92
SNX29-203ENST00000564111 ADCYAP1P18509 176 aa9.31□□□□□ -0.92
SNX29-203ENST00000564111 GAGE2BQ13066 116 aa9.31□□□□□ -0.92
SNX29-203ENST00000564111 Q6ZRP5 223 aa9.31□□□□□ -0.92
SNX29-203ENST00000564111 UBE2D1P51668 147 aa9.31□□□□□ -0.92
SNX29-203ENST00000564111 RPL18AQ02543 176 aaKnown RBP9.31□□□□□ -0.92
SNX29-203ENST00000564111 AMELXQ99217 191 aa9.31□□□□□ -0.92
SNX29-203ENST00000564111 TRBV30A0A0K0K1B3 111 aa9.3□□□□□ -0.92
SNX29-203ENST00000564111 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.3□□□□□ -0.92
SNX29-203ENST00000564111 OPRPNQ99935 248 aaPredicted RBP9.3□□□□□ -0.92
SNX29-203ENST00000564111 LINC00242Q5T6M2 205 aa9.29□□□□□ -0.92
SNX29-203ENST00000564111 CARHSP1Q9Y2V2 147 aaKnown RBP9.29□□□□□ -0.92
SNX29-203ENST00000564111 HERVK_113P63121 156 aa9.29□□□□□ -0.92
SNX29-203ENST00000564111 MYCBP2O75592 4640 aa9.29□□□□□ -0.92
SNX29-203ENST00000564111 C10orf91Q5T1B1 145 aa9.28□□□□□ -0.92
SNX29-203ENST00000564111 SPINK6Q6UWN8 80 aa9.28□□□□□ -0.92
SNX29-203ENST00000564111 TOMM6Q96B49 74 aa9.28□□□□□ -0.92
SNX29-203ENST00000564111 PACRGQ96M98 296 aaPredicted RBP9.28□□□□□ -0.92
SNX29-203ENST00000564111 IGIPA6NJ69 53 aa9.28□□□□□ -0.92
SNX29-203ENST00000564111 PRSS2P07478 247 aa9.28□□□□□ -0.92
SNX29-203ENST00000564111 HNRNPA3P51991 378 aaKnown RBP9.28□□□□□ -0.92
SNX29-203ENST00000564111 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
SNX29-203ENST00000564111 LINC01546A6NGU7 62 aa9.27□□□□□ -0.93
SNX29-203ENST00000564111 ERASQ7Z444 233 aa9.27□□□□□ -0.93
SNX29-203ENST00000564111 ODF1Q14990 250 aa9.26□□□□□ -0.93
SNX29-203ENST00000564111 LINC00173Q6ZV60 143 aa9.25□□□□□ -0.93
SNX29-203ENST00000564111 GEMIN7Q9H840 131 aaKnown RBP9.25□□□□□ -0.93
SNX29-203ENST00000564111 CXCL5P42830 114 aa9.25□□□□□ -0.93
SNX29-203ENST00000564111 Q8IZM0 81 aa9.25□□□□□ -0.93
SNX29-203ENST00000564111 SMCO4Q9NRQ5 59 aa9.25□□□□□ -0.93
SNX29-203ENST00000564111 FA2HQ7L5A8 372 aa9.24□□□□□ -0.93
SNX29-203ENST00000564111 SCGB3A1Q96QR1 104 aa9.24□□□□□ -0.93
SNX29-203ENST00000564111 KIAA0087Q14695 138 aa9.24□□□□□ -0.93
SNX29-203ENST00000564111 C9orf116Q5BN46 136 aaPredicted RBP9.24□□□□□ -0.93
SNX29-203ENST00000564111 ALKBH7Q9BT30 221 aaPredicted RBP9.24□□□□□ -0.93
SNX29-203ENST00000564111 C6orf48Q9UBA6 75 aa9.24□□□□□ -0.93
SNX29-203ENST00000564111 CKS1BP61024 79 aa9.23□□□□□ -0.93
SNX29-203ENST00000564111 RPS10P5Q9NQ39 176 aa9.23□□□□□ -0.93
SNX29-203ENST00000564111 KIAA1644Q3SXP7 199 aa9.23□□□□□ -0.93
SNX29-203ENST00000564111 UNQ6190/PRO20217Q6UXQ8 127 aa9.23□□□□□ -0.93
SNX29-203ENST00000564111 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
SNX29-203ENST00000564111 NDUFC2-KCTD14E9PQ53 114 aa9.22□□□□□ -0.93
SNX29-203ENST00000564111 FABP9Q0Z7S8 132 aa9.21□□□□□ -0.93
SNX29-203ENST00000564111 FAT3Q8TDW7 4589 aa9.21□□□□□ -0.93
SNX29-203ENST00000564111 TINCRA0A1B0GVN0 87 aa9.21□□□□□ -0.94
SNX29-203ENST00000564111 SNAPINO95295 136 aa9.21□□□□□ -0.94
SNX29-203ENST00000564111 HERC1Q15751 4861 aa9.21□□□□□ -0.94
SNX29-203ENST00000564111 A0A0J9YXV3 536 aa9.2□□□□□ -0.94
SNX29-203ENST00000564111 A0A1W2PNN7 141 aa9.2□□□□□ -0.94
SNX29-203ENST00000564111 C6orf226Q5I0X4 101 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms