RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 RHPN1-AS1Q9BWJ2 59 aa10.17□□□□□ -0.78
GTF3C1-203ENST00000562609 PRO0628Q9UI54 55 aa10.17□□□□□ -0.78
GTF3C1-203ENST00000562609 SOCS3O14543 225 aa10.17□□□□□ -0.78
GTF3C1-203ENST00000562609 HOXD3P31249 432 aaPredicted RBP10.17□□□□□ -0.78
GTF3C1-203ENST00000562609 LINC00336Q6ZUF6 198 aa10.17□□□□□ -0.78
GTF3C1-203ENST00000562609 C1orf43Q9BWL3 253 aa10.17□□□□□ -0.78
GTF3C1-203ENST00000562609 LINC00846Q9NV44 126 aa10.17□□□□□ -0.78
GTF3C1-203ENST00000562609 C14orf132Q9NPU4 83 aa10.16□□□□□ -0.78
GTF3C1-203ENST00000562609 TINCRA0A1B0GVN0 87 aa10.16□□□□□ -0.78
GTF3C1-203ENST00000562609 CFHR3Q02985 330 aa10.16□□□□□ -0.78
GTF3C1-203ENST00000562609 NIPBLQ6KC79 2804 aaeCLIP10.16□□□□□ -0.78
GTF3C1-203ENST00000562609 C9orf129Q5T035 196 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-203ENST00000562609 HECTD1Q9ULT8 2610 aa10.15□□□□□ -0.78
GTF3C1-203ENST00000562609 NDUFA1O15239 70 aa10.15□□□□□ -0.79
GTF3C1-203ENST00000562609 PSMB8P28062 276 aa10.15□□□□□ -0.79
GTF3C1-203ENST00000562609 KLLNB2CW77 178 aa10.14□□□□□ -0.79
GTF3C1-203ENST00000562609 SOSTDC1Q6X4U4 206 aa10.14□□□□□ -0.79
GTF3C1-203ENST00000562609 CDKN2A-AS1Q9UH64 79 aa10.14□□□□□ -0.79
GTF3C1-203ENST00000562609 AKAP9Q99996 3911 aa10.14□□□□□ -0.79
GTF3C1-203ENST00000562609 H3BUA1 57 aa10.13□□□□□ -0.79
GTF3C1-203ENST00000562609 Q9H8V8 135 aa10.13□□□□□ -0.79
GTF3C1-203ENST00000562609 FASNP49327 2511 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-203ENST00000562609 WFDC11Q8NEX6 87 aa10.13□□□□□ -0.79
GTF3C1-203ENST00000562609 PDZD2O15018 2839 aa10.12□□□□□ -0.79
GTF3C1-203ENST00000562609 UNC79Q9P2D8 2635 aa10.12□□□□□ -0.79
GTF3C1-203ENST00000562609 IGHV3-16A0A0C4DH30 117 aa10.12□□□□□ -0.79
GTF3C1-203ENST00000562609 C9orf85Q96MD7 179 aa10.12□□□□□ -0.79
GTF3C1-203ENST00000562609 PKIGQ9Y2B9 76 aa10.12□□□□□ -0.79
GTF3C1-203ENST00000562609 GCN1Q92616 2671 aaKnown RBP10.12□□□□□ -0.79
GTF3C1-203ENST00000562609 NOTCH3Q9UM47 2321 aa10.12□□□□□ -0.79
GTF3C1-203ENST00000562609 RPL35AP18077 110 aaKnown RBP10.11□□□□□ -0.79
GTF3C1-203ENST00000562609 TMEM243Q9BU79 118 aa10.11□□□□□ -0.79
GTF3C1-203ENST00000562609 NDUFC2O95298 119 aa10.11□□□□□ -0.79
GTF3C1-203ENST00000562609 DEFB136Q30KP8 78 aa10.11□□□□□ -0.79
GTF3C1-203ENST00000562609 Q6YL49 198 aa10.11□□□□□ -0.79
GTF3C1-203ENST00000562609 C18orf65Q6ZTR6 163 aa10.11□□□□□ -0.79
GTF3C1-203ENST00000562609 UBE2D4Q9Y2X8 147 aa10.11□□□□□ -0.79
GTF3C1-203ENST00000562609 F8WDY8 70 aa10.11□□□□□ -0.79
GTF3C1-203ENST00000562609 KRTAP1-3Q8IUG1 177 aa10.11□□□□□ -0.79
GTF3C1-203ENST00000562609 HILS1P60008 231 aa10.1□□□□□ -0.79
GTF3C1-203ENST00000562609 IGHV3-73A0A0B4J1V6 119 aa10.1□□□□□ -0.79
GTF3C1-203ENST00000562609 GHRHP01286 108 aa10.1□□□□□ -0.79
GTF3C1-203ENST00000562609 IGKV3-20P01619 116 aa10.1□□□□□ -0.79
GTF3C1-203ENST00000562609 NDUFC2-KCTD14E9PQ53 114 aa10.09□□□□□ -0.79
GTF3C1-203ENST00000562609 ZNF702PQ9H963 129 aa10.09□□□□□ -0.79
GTF3C1-203ENST00000562609 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-203ENST00000562609 TRAV12-2A0A075B6T6 113 aa10.09□□□□□ -0.79
GTF3C1-203ENST00000562609 FAM236DA0A1B0GTK5 79 aa10.09□□□□□ -0.79
GTF3C1-203ENST00000562609 IGKV2-29A2NJV5 120 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-203ENST00000562609 FSHBP01225 129 aa10.09□□□□□ -0.79
GTF3C1-203ENST00000562609 FAM236CP0DP71 79 aa10.09□□□□□ -0.79
GTF3C1-203ENST00000562609 ZNF415Q09FC8 603 aa10.09□□□□□ -0.79
GTF3C1-203ENST00000562609 C20orf197Q8N268 126 aa10.09□□□□□ -0.79
GTF3C1-203ENST00000562609 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-203ENST00000562609 KMT2BQ9UMN6 2715 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-203ENST00000562609 TRAV23DV6A0A075B6W5 121 aa10.08□□□□□ -0.8
GTF3C1-203ENST00000562609 COPS9Q8WXC6 57 aa10.07□□□□□ -0.8
GTF3C1-203ENST00000562609 RPL28P46779 137 aaKnown RBP10.07□□□□□ -0.8
GTF3C1-203ENST00000562609 PIK3CD-AS1Q5SR53 167 aa10.07□□□□□ -0.8
GTF3C1-203ENST00000562609 WFDC9Q8NEX5 89 aa10.07□□□□□ -0.8
GTF3C1-203ENST00000562609 A0A087WYN8 130 aa10.06□□□□□ -0.8
GTF3C1-203ENST00000562609 RBMY1BA6NDE4 496 aaKnown RBP10.06□□□□□ -0.8
GTF3C1-203ENST00000562609 RBMY1EA6NEQ0 496 aaKnown RBP10.06□□□□□ -0.8
GTF3C1-203ENST00000562609 RBMY1DP0C7P1 496 aaKnown RBP10.06□□□□□ -0.8
GTF3C1-203ENST00000562609 RBMY1A1P0DJD3 496 aaKnown RBP10.06□□□□□ -0.8
GTF3C1-203ENST00000562609 RBMY1CP0DJD4 496 aa10.06□□□□□ -0.8
GTF3C1-203ENST00000562609 PROK1P58294 105 aa10.06□□□□□ -0.8
GTF3C1-203ENST00000562609 RBMY1FQ15415 496 aaKnown RBP10.06□□□□□ -0.8
GTF3C1-203ENST00000562609 KHDC1LQ5JSQ8 128 aa10.06□□□□□ -0.8
GTF3C1-203ENST00000562609 NCR3O14931 201 aa10.06□□□□□ -0.8
GTF3C1-203ENST00000562609 C11orf44Q8N8P7 122 aa10.06□□□□□ -0.8
GTF3C1-203ENST00000562609 JMJD1CQ15652 2540 aa10.05□□□□□ -0.8
GTF3C1-203ENST00000562609 COX6A2Q02221 97 aa10.05□□□□□ -0.8
GTF3C1-203ENST00000562609 Q9UF83 564 aa10.05□□□□□ -0.8
GTF3C1-203ENST00000562609 CHCHD7Q9BUK0 85 aa10.05□□□□□ -0.8
GTF3C1-203ENST00000562609 SERP1Q9Y6X1 66 aa10.05□□□□□ -0.8
GTF3C1-203ENST00000562609 SLURP1P55000 103 aa10.04□□□□□ -0.8
GTF3C1-203ENST00000562609 XCL1P47992 114 aa10.04□□□□□ -0.8
GTF3C1-203ENST00000562609 LINC00467Q9BRT7 94 aa10.04□□□□□ -0.8
GTF3C1-203ENST00000562609 XCL2Q9UBD3 114 aa10.04□□□□□ -0.8
GTF3C1-203ENST00000562609 TMEM86BQ8N661 226 aa10.03□□□□□ -0.8
GTF3C1-203ENST00000562609 OBSCN-AS1Q96MR7 158 aa10.03□□□□□ -0.8
GTF3C1-203ENST00000562609 EPM2AB3EWF7 344 aa10.03□□□□□ -0.8
GTF3C1-203ENST00000562609 K7EMT4 169 aa10.03□□□□□ -0.8
GTF3C1-203ENST00000562609 IGHV1OR15-1A0A075B7D0 117 aa10.02□□□□□ -0.8
GTF3C1-203ENST00000562609 IGLV5-45A0A087WSX0 123 aa10.02□□□□□ -0.8
GTF3C1-203ENST00000562609 IGLV5-39A0A0G2JS06 123 aa10.02□□□□□ -0.81
GTF3C1-203ENST00000562609 CRPP02741 224 aa10.02□□□□□ -0.81
GTF3C1-203ENST00000562609 FAM19A1Q7Z5A9 133 aa10.02□□□□□ -0.81
GTF3C1-203ENST00000562609 OVOL2Q9BRP0 275 aa10.02□□□□□ -0.81
GTF3C1-203ENST00000562609 TRAV13-2A0A0B4J235 113 aa10.01□□□□□ -0.81
GTF3C1-203ENST00000562609 IGHV3-38A0A0C4DH36 116 aa10.01□□□□□ -0.81
GTF3C1-203ENST00000562609 LINC00337Q8N6G1 96 aa10.01□□□□□ -0.81
GTF3C1-203ENST00000562609 UBE2E2Q96LR5 201 aa10.01□□□□□ -0.81
GTF3C1-203ENST00000562609 KNCNA6PVL3 124 aa10□□□□□ -0.81
GTF3C1-203ENST00000562609 SETXQ7Z333 2677 aaKnown RBP10□□□□□ -0.81
GTF3C1-203ENST00000562609 H7BZZ5 65 aa10□□□□□ -0.81
GTF3C1-203ENST00000562609 SPINK13Q1W4C9 94 aa10□□□□□ -0.81
GTF3C1-203ENST00000562609 DGAT2L7PQ6IED9 249 aa10□□□□□ -0.81
GTF3C1-203ENST00000562609 C16orf95Q9H693 158 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms