RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 C2orf66Q6UXQ4 117 aa12.29□□□□□ -0.44
TMEM249-202ENST00000562477 DPH3Q96FX2 82 aa12.29□□□□□ -0.44
TMEM249-202ENST00000562477 PYGO1Q9Y3Y4 419 aa12.29□□□□□ -0.44
TMEM249-202ENST00000562477 IGKV2-24A0A0C4DH68 120 aa12.28□□□□□ -0.44
TMEM249-202ENST00000562477 SYCNQ0VAF6 134 aa12.28□□□□□ -0.44
TMEM249-202ENST00000562477 NXT2Q9NPJ8 142 aaKnown RBP12.28□□□□□ -0.44
TMEM249-202ENST00000562477 CYSLTR1Q9Y271 337 aa12.28□□□□□ -0.44
TMEM249-202ENST00000562477 A0A096LNI7 61 aa12.27□□□□□ -0.45
TMEM249-202ENST00000562477 IGHV3OR16-9A0A0B4J2B5 98 aa12.27□□□□□ -0.45
TMEM249-202ENST00000562477 ORMDL2Q53FV1 153 aa12.27□□□□□ -0.45
TMEM249-202ENST00000562477 TMEM141Q96I45 108 aa12.27□□□□□ -0.45
TMEM249-202ENST00000562477 GNB1LQ9BYB4 327 aa12.27□□□□□ -0.45
TMEM249-202ENST00000562477 HERC1Q15751 4861 aa12.27□□□□□ -0.45
TMEM249-202ENST00000562477 MAJINQ3KP22 176 aa12.26□□□□□ -0.45
TMEM249-202ENST00000562477 Q6ZRU5 148 aa12.26□□□□□ -0.45
TMEM249-202ENST00000562477 APOC3P02656 99 aa12.25□□□□□ -0.45
TMEM249-202ENST00000562477 RPL37AP61513 92 aaKnown RBP12.25□□□□□ -0.45
TMEM249-202ENST00000562477 SPAG11BQ08648 103 aa12.25□□□□□ -0.45
TMEM249-202ENST00000562477 LINC00173Q6ZV60 143 aa12.25□□□□□ -0.45
TMEM249-202ENST00000562477 ALKBH7Q9BT30 221 aaPredicted RBP12.25□□□□□ -0.45
TMEM249-202ENST00000562477 LINC00242Q5T6M2 205 aa12.24□□□□□ -0.45
TMEM249-202ENST00000562477 MRPL18Q9H0U6 180 aaKnown RBP12.24□□□□□ -0.45
TMEM249-202ENST00000562477 TGIF2-C20orf24A0A0A6YYL0 155 aa12.23□□□□□ -0.45
TMEM249-202ENST00000562477 IGIPA6NJ69 53 aa12.23□□□□□ -0.45
TMEM249-202ENST00000562477 APOMO95445 188 aa12.23□□□□□ -0.45
TMEM249-202ENST00000562477 FABP9Q0Z7S8 132 aa12.23□□□□□ -0.45
TMEM249-202ENST00000562477 TEX43Q6ZNM6 134 aa12.23□□□□□ -0.45
TMEM249-202ENST00000562477 ORAOV1Q8WV07 137 aa12.23□□□□□ -0.45
TMEM249-202ENST00000562477 CAMK2N2Q96S95 79 aa12.23□□□□□ -0.45
TMEM249-202ENST00000562477 PLAC8Q9NZF1 115 aa12.23□□□□□ -0.45
TMEM249-202ENST00000562477 LRP1Q07954 4544 aaKnown RBP12.22□□□□□ -0.45
TMEM249-202ENST00000562477 K7EMI3 77 aa12.22□□□□□ -0.45
TMEM249-202ENST00000562477 UBE2D1P51668 147 aa12.22□□□□□ -0.45
TMEM249-202ENST00000562477 AMELXQ99217 191 aa12.22□□□□□ -0.45
TMEM249-202ENST00000562477 COX19Q49B96 90 aa12.21□□□□□ -0.45
TMEM249-202ENST00000562477 C2orf48Q96LS8 159 aa12.21□□□□□ -0.45
TMEM249-202ENST00000562477 A0A0J9YXV3 536 aa12.2□□□□□ -0.46
TMEM249-202ENST00000562477 MT-ND6P03923 174 aa12.2□□□□□ -0.46
TMEM249-202ENST00000562477 HNRNPA3P51991 378 aaKnown RBP12.2□□□□□ -0.46
TMEM249-202ENST00000562477 Q6ZN92 141 aa12.2□□□□□ -0.46
TMEM249-202ENST00000562477 STPG4Q8N801 248 aa12.2□□□□□ -0.46
TMEM249-202ENST00000562477 OR10D4PQ8NGN7 298 aa12.2□□□□□ -0.46
TMEM249-202ENST00000562477 TOMM6Q96B49 74 aa12.2□□□□□ -0.46
TMEM249-202ENST00000562477 VCX2Q9H322 139 aa12.2□□□□□ -0.46
TMEM249-202ENST00000562477 FAT3Q8TDW7 4589 aa12.2□□□□□ -0.46
TMEM249-202ENST00000562477 A0A087WZ39 114 aa12.19□□□□□ -0.46
TMEM249-202ENST00000562477 C2orf88Q9BSF0 95 aa12.19□□□□□ -0.46
TMEM249-202ENST00000562477 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.18□□□□□ -0.46
TMEM249-202ENST00000562477 SNAPINO95295 136 aa12.18□□□□□ -0.46
TMEM249-202ENST00000562477 GAGE2BQ13066 116 aa12.18□□□□□ -0.46
TMEM249-202ENST00000562477 NDUFA5Q16718 116 aa12.18□□□□□ -0.46
TMEM249-202ENST00000562477 SVBPQ8N300 66 aa12.18□□□□□ -0.46
TMEM249-202ENST00000562477 LOC107984640A0A0U1RRK4 108 aa12.17□□□□□ -0.46
TMEM249-202ENST00000562477 LINC01546A6NGU7 62 aa12.17□□□□□ -0.46
TMEM249-202ENST00000562477 PTTG1IPP53801 180 aa12.17□□□□□ -0.46
TMEM249-202ENST00000562477 C10orf25Q5T742 122 aa12.17□□□□□ -0.46
TMEM249-202ENST00000562477 NPSP0C0P6 89 aa12.16□□□□□ -0.46
TMEM249-202ENST00000562477 TIMM17AQ99595 171 aa12.16□□□□□ -0.46
TMEM249-202ENST00000562477 KIAA0087Q14695 138 aa12.15□□□□□ -0.46
TMEM249-202ENST00000562477 UNQ6190/PRO20217Q6UXQ8 127 aa12.15□□□□□ -0.46
TMEM249-202ENST00000562477 FA2HQ7L5A8 372 aa12.15□□□□□ -0.46
TMEM249-202ENST00000562477 SCGB3A1Q96QR1 104 aa12.15□□□□□ -0.46
TMEM249-202ENST00000562477 PKIGQ9Y2B9 76 aa12.15□□□□□ -0.46
TMEM249-202ENST00000562477 TRAPPC1Q9Y5R8 145 aa12.15□□□□□ -0.46
TMEM249-202ENST00000562477 G0S2P27469 103 aa12.14□□□□□ -0.47
TMEM249-202ENST00000562477 LINC00474Q9P2X8 69 aa12.14□□□□□ -0.47
TMEM249-202ENST00000562477 NDUFA1O15239 70 aa12.13□□□□□ -0.47
TMEM249-202ENST00000562477 RPL18AQ02543 176 aaKnown RBP12.13□□□□□ -0.47
TMEM249-202ENST00000562477 ERASQ7Z444 233 aa12.13□□□□□ -0.47
TMEM249-202ENST00000562477 MRPL35Q9NZE8 188 aaKnown RBP12.13□□□□□ -0.47
TMEM249-202ENST00000562477 RNF151Q2KHN1 245 aa12.12□□□□□ -0.47
TMEM249-202ENST00000562477 FAM19A3Q7Z5A8 133 aa12.12□□□□□ -0.47
TMEM249-202ENST00000562477 URB1-AS1Q96HZ7 61 aa12.12□□□□□ -0.47
TMEM249-202ENST00000562477 YPEL4Q96NS1 127 aa12.12□□□□□ -0.47
TMEM249-202ENST00000562477 C6orf48Q9UBA6 75 aa12.12□□□□□ -0.47
TMEM249-202ENST00000562477 PAPPA-AS1Q5QFB9 102 aa12.11□□□□□ -0.47
TMEM249-202ENST00000562477 C2orf82Q6UX34 121 aa12.11□□□□□ -0.47
TMEM249-202ENST00000562477 C18orf32Q8TCD1 76 aa12.11□□□□□ -0.47
TMEM249-202ENST00000562477 C7orf33Q8WU49 177 aa12.11□□□□□ -0.47
TMEM249-202ENST00000562477 SMCO4Q9NRQ5 59 aa12.11□□□□□ -0.47
TMEM249-202ENST00000562477 A0A1W2PNN7 141 aa12.1□□□□□ -0.47
TMEM249-202ENST00000562477 KRTAP29-1A8MX34 341 aaPredicted RBP12.1□□□□□ -0.47
TMEM249-202ENST00000562477 F8WDY8 70 aa12.1□□□□□ -0.47
TMEM249-202ENST00000562477 LINC01561Q8N1V8 128 aa12.1□□□□□ -0.47
TMEM249-202ENST00000562477 CDKN2A-AS1Q9UH64 79 aa12.1□□□□□ -0.47
TMEM249-202ENST00000562477 J3QL48 77 aa12.09□□□□□ -0.47
TMEM249-202ENST00000562477 SLC7A5P1Q8MH63 180 aa12.09□□□□□ -0.47
TMEM249-202ENST00000562477 A0A096LNJ9 63 aa12.08□□□□□ -0.48
TMEM249-202ENST00000562477 GEMIN7Q9H840 131 aaKnown RBP12.08□□□□□ -0.48
TMEM249-202ENST00000562477 HERVK_113P63121 156 aa12.07□□□□□ -0.48
TMEM249-202ENST00000562477 C9orf116Q5BN46 136 aaPredicted RBP12.07□□□□□ -0.48
TMEM249-202ENST00000562477 CBLN2Q8IUK8 224 aa12.07□□□□□ -0.48
TMEM249-202ENST00000562477 CST9LQ9H4G1 147 aa12.07□□□□□ -0.48
TMEM249-202ENST00000562477 TOMM7Q9P0U1 55 aa12.07□□□□□ -0.48
TMEM249-202ENST00000562477 PRR3P79522 188 aaKnown RBP12.06□□□□□ -0.48
TMEM249-202ENST00000562477 PMCHL1Q16048 86 aa12.06□□□□□ -0.48
TMEM249-202ENST00000562477 Q6ZRP5 223 aa12.06□□□□□ -0.48
TMEM249-202ENST00000562477 SEC11AP67812 179 aa12.05□□□□□ -0.48
TMEM249-202ENST00000562477 LINC00469Q8N7U9 141 aa12.05□□□□□ -0.48
TMEM249-202ENST00000562477 LINC01549A6NIU2 74 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms