RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 LINC01549A6NIU2 74 aa10.19□□□□□ -0.78
LMX1B-204ENST00000561065 J3QL48 77 aa10.19□□□□□ -0.78
LMX1B-204ENST00000561065 MT-ND6P03923 174 aa10.19□□□□□ -0.78
LMX1B-204ENST00000561065 NPSP0C0P6 89 aa10.19□□□□□ -0.78
LMX1B-204ENST00000561065 HIGD2BQ4VC39 106 aa10.19□□□□□ -0.78
LMX1B-204ENST00000561065 LINC00474Q9P2X8 69 aa10.19□□□□□ -0.78
LMX1B-204ENST00000561065 CHTF8P0CG12 524 aa10.18□□□□□ -0.78
LMX1B-204ENST00000561065 Q6ZUT4 128 aa10.18□□□□□ -0.78
LMX1B-204ENST00000561065 C2orf88Q9BSF0 95 aa10.18□□□□□ -0.78
LMX1B-204ENST00000561065 IFITM10A6NMD0 228 aa10.17□□□□□ -0.78
LMX1B-204ENST00000561065 SNAPINO95295 136 aa10.17□□□□□ -0.78
LMX1B-204ENST00000561065 RPL37AP61513 92 aaKnown RBP10.17□□□□□ -0.78
LMX1B-204ENST00000561065 PRSS3P2Q8NHM4 247 aa10.17□□□□□ -0.78
LMX1B-204ENST00000561065 TMEM141Q96I45 108 aa10.17□□□□□ -0.78
LMX1B-204ENST00000561065 F8WDY8 70 aa10.16□□□□□ -0.78
LMX1B-204ENST00000561065 RNASE13Q5GAN3 156 aaKnown RBP10.16□□□□□ -0.78
LMX1B-204ENST00000561065 TEX43Q6ZNM6 134 aa10.16□□□□□ -0.78
LMX1B-204ENST00000561065 SVBPQ8N300 66 aa10.16□□□□□ -0.78
LMX1B-204ENST00000561065 VCX2Q9H322 139 aa10.16□□□□□ -0.78
LMX1B-204ENST00000561065 HMCN2Q8NDA2 5059 aa10.15□□□□□ -0.78
LMX1B-204ENST00000561065 TGIF2-C20orf24A0A0A6YYL0 155 aa10.15□□□□□ -0.78
LMX1B-204ENST00000561065 SYCNQ0VAF6 134 aa10.15□□□□□ -0.78
LMX1B-204ENST00000561065 C2orf66Q6UXQ4 117 aa10.15□□□□□ -0.78
LMX1B-204ENST00000561065 CARD19Q96LW7 228 aa10.15□□□□□ -0.78
LMX1B-204ENST00000561065 APOC3P02656 99 aa10.14□□□□□ -0.79
LMX1B-204ENST00000561065 FABP9Q0Z7S8 132 aa10.14□□□□□ -0.79
LMX1B-204ENST00000561065 SPACA4Q8TDM5 124 aa10.14□□□□□ -0.79
LMX1B-204ENST00000561065 C2orf48Q96LS8 159 aa10.14□□□□□ -0.79
LMX1B-204ENST00000561065 SEC11AP67812 179 aa10.13□□□□□ -0.79
LMX1B-204ENST00000561065 COX6A2Q02221 97 aa10.13□□□□□ -0.79
LMX1B-204ENST00000561065 C5orf38Q86SI9 138 aa10.13□□□□□ -0.79
LMX1B-204ENST00000561065 OR10D4PQ8NGN7 298 aa10.13□□□□□ -0.79
LMX1B-204ENST00000561065 IGLV4-69A0A075B6H9 119 aa10.12□□□□□ -0.79
LMX1B-204ENST00000561065 A0A087WYN8 130 aa10.12□□□□□ -0.79
LMX1B-204ENST00000561065 KIAA1644Q3SXP7 199 aa10.12□□□□□ -0.79
LMX1B-204ENST00000561065 CAMK2N2Q96S95 79 aa10.12□□□□□ -0.79
LMX1B-204ENST00000561065 IGLV4-3A0A075B6K6 122 aa10.11□□□□□ -0.79
LMX1B-204ENST00000561065 OPRPNQ99935 248 aaPredicted RBP10.11□□□□□ -0.79
LMX1B-204ENST00000561065 SMCO4Q9NRQ5 59 aa10.11□□□□□ -0.79
LMX1B-204ENST00000561065 IGHV3OR16-9A0A0B4J2B5 98 aa10.1□□□□□ -0.79
LMX1B-204ENST00000561065 C7orf33Q8WU49 177 aa10.1□□□□□ -0.79
LMX1B-204ENST00000561065 MRPL18Q9H0U6 180 aaKnown RBP10.1□□□□□ -0.79
LMX1B-204ENST00000561065 TNXBP22105 4242 aa10.1□□□□□ -0.79
LMX1B-204ENST00000561065 LOC107984640A0A0U1RRK4 108 aa10.09□□□□□ -0.79
LMX1B-204ENST00000561065 MAJINQ3KP22 176 aa10.09□□□□□ -0.79
LMX1B-204ENST00000561065 FA2HQ7L5A8 372 aa10.09□□□□□ -0.79
LMX1B-204ENST00000561065 LINC00526Q96FQ7 95 aa10.09□□□□□ -0.79
LMX1B-204ENST00000561065 ALKBH7Q9BT30 221 aaPredicted RBP10.09□□□□□ -0.79
LMX1B-204ENST00000561065 TRAPPC1Q9Y5R8 145 aa10.09□□□□□ -0.79
LMX1B-204ENST00000561065 OXTP01178 125 aa10.08□□□□□ -0.8
LMX1B-204ENST00000561065 SPAG11BQ08648 103 aa10.08□□□□□ -0.8
LMX1B-204ENST00000561065 RNF151Q2KHN1 245 aa10.08□□□□□ -0.8
LMX1B-204ENST00000561065 ERASQ7Z444 233 aa10.08□□□□□ -0.8
LMX1B-204ENST00000561065 LINC01561Q8N1V8 128 aa10.08□□□□□ -0.8
LMX1B-204ENST00000561065 ORAOV1Q8WV07 137 aa10.08□□□□□ -0.8
LMX1B-204ENST00000561065 TOMM6Q96B49 74 aa10.08□□□□□ -0.8
LMX1B-204ENST00000561065 SCGB3A1Q96QR1 104 aa10.08□□□□□ -0.8
LMX1B-204ENST00000561065 TIMM17AQ99595 171 aa10.08□□□□□ -0.8
LMX1B-204ENST00000561065 PLAC8Q9NZF1 115 aa10.08□□□□□ -0.8
LMX1B-204ENST00000561065 A0A087WZ39 114 aa10.07□□□□□ -0.8
LMX1B-204ENST00000561065 IGKV2-24A0A0C4DH68 120 aa10.07□□□□□ -0.8
LMX1B-204ENST00000561065 IGIPA6NJ69 53 aa10.07□□□□□ -0.8
LMX1B-204ENST00000561065 FAM104AQ969W3 186 aa10.07□□□□□ -0.8
LMX1B-204ENST00000561065 A0A096LNI7 61 aa10.07□□□□□ -0.8
LMX1B-204ENST00000561065 NDUFA1O15239 70 aa10.07□□□□□ -0.8
LMX1B-204ENST00000561065 RAB5BP61020 215 aa10.07□□□□□ -0.8
LMX1B-204ENST00000561065 LINC00242Q5T6M2 205 aa10.07□□□□□ -0.8
LMX1B-204ENST00000561065 AMELXQ99217 191 aa10.07□□□□□ -0.8
LMX1B-204ENST00000561065 GEMIN7Q9H840 131 aaKnown RBP10.07□□□□□ -0.8
LMX1B-204ENST00000561065 UBE2D1P51668 147 aa10.06□□□□□ -0.8
LMX1B-204ENST00000561065 HERVK_113P63121 156 aa10.06□□□□□ -0.8
LMX1B-204ENST00000561065 STPG4Q8N801 248 aa10.06□□□□□ -0.8
LMX1B-204ENST00000561065 PRSS2P07478 247 aa10.05□□□□□ -0.8
LMX1B-204ENST00000561065 Q6ZRU5 148 aa10.05□□□□□ -0.8
LMX1B-204ENST00000561065 MRPL35Q9NZE8 188 aaKnown RBP10.05□□□□□ -0.8
LMX1B-204ENST00000561065 LINC01546A6NGU7 62 aa10.04□□□□□ -0.8
LMX1B-204ENST00000561065 PACRGQ96M98 296 aaPredicted RBP10.04□□□□□ -0.8
LMX1B-204ENST00000561065 MT1HL1P0DM35 61 aa10.03□□□□□ -0.8
LMX1B-204ENST00000561065 GAGE2BQ13066 116 aa10.03□□□□□ -0.8
LMX1B-204ENST00000561065 FAM19A3Q7Z5A8 133 aa10.03□□□□□ -0.8
LMX1B-204ENST00000561065 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.02□□□□□ -0.81
LMX1B-204ENST00000561065 LINC00614P0C842 121 aa10.02□□□□□ -0.81
LMX1B-204ENST00000561065 PTTG1IPP53801 180 aa10.02□□□□□ -0.81
LMX1B-204ENST00000561065 C6orf226Q5I0X4 101 aa10.02□□□□□ -0.81
LMX1B-204ENST00000561065 CKS1BP61024 79 aa10.01□□□□□ -0.81
LMX1B-204ENST00000561065 TRBV30A0A0K0K1B3 111 aa10□□□□□ -0.81
LMX1B-204ENST00000561065 RPL18AQ02543 176 aaKnown RBP10□□□□□ -0.81
LMX1B-204ENST00000561065 PRR3P79522 188 aaKnown RBP9.99□□□□□ -0.81
LMX1B-204ENST00000561065 PMVKQ15126 192 aa9.99□□□□□ -0.81
LMX1B-204ENST00000561065 LINC00173Q6ZV60 143 aa9.99□□□□□ -0.81
LMX1B-204ENST00000561065 TINCRA0A1B0GVN0 87 aa9.97□□□□□ -0.81
LMX1B-204ENST00000561065 TLX1NBP0CAT3 122 aa9.97□□□□□ -0.81
LMX1B-204ENST00000561065 ZC2HC1BQ5TFG8 222 aa9.97□□□□□ -0.81
LMX1B-204ENST00000561065 LINC00469Q8N7U9 141 aa9.97□□□□□ -0.81
LMX1B-204ENST00000561065 C18orf32Q8TCD1 76 aa9.97□□□□□ -0.81
LMX1B-204ENST00000561065 CST9LQ9H4G1 147 aa9.97□□□□□ -0.81
LMX1B-204ENST00000561065 TOMM7Q9P0U1 55 aa9.97□□□□□ -0.81
LMX1B-204ENST00000561065 H3BRM9 83 aa9.96□□□□□ -0.82
LMX1B-204ENST00000561065 ATP5LO75964 103 aa9.96□□□□□ -0.82
LMX1B-204ENST00000561065 HBDP02042 147 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 936.4 ms