RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 STPG4Q8N801 248 aa11.78□□□□□ -0.52
LINC01220-202ENST00000561000 MAP1LC3AQ9H492 121 aa11.78□□□□□ -0.52
LINC01220-202ENST00000561000 IFI27P40305 119 aaPredicted RBP11.77□□□□□ -0.53
LINC01220-202ENST00000561000 ALKBH7Q9BT30 221 aaPredicted RBP11.77□□□□□ -0.53
LINC01220-202ENST00000561000 Q8N8P6 123 aa11.76□□□□□ -0.53
LINC01220-202ENST00000561000 LINC00526Q96FQ7 95 aa11.76□□□□□ -0.53
LINC01220-202ENST00000561000 CDC42SE2Q9NRR3 84 aa11.76□□□□□ -0.53
LINC01220-202ENST00000561000 LAMTOR2Q9Y2Q5 125 aa11.76□□□□□ -0.53
LINC01220-202ENST00000561000 IGHV1-58A0A0C4DH39 117 aa11.75□□□□□ -0.53
LINC01220-202ENST00000561000 FABP9Q0Z7S8 132 aa11.75□□□□□ -0.53
LINC01220-202ENST00000561000 SS18Q15532 418 aa11.75□□□□□ -0.53
LINC01220-202ENST00000561000 A0A096LNI7 61 aa11.74□□□□□ -0.53
LINC01220-202ENST00000561000 ZNF664Q8N3J9 261 aa11.74□□□□□ -0.53
LINC01220-202ENST00000561000 TRAPPC1Q9Y5R8 145 aa11.73□□□□□ -0.53
LINC01220-202ENST00000561000 SCO1O75880 301 aa11.72□□□□□ -0.53
LINC01220-202ENST00000561000 MT-ND6P03923 174 aa11.72□□□□□ -0.53
LINC01220-202ENST00000561000 CARD19Q96LW7 228 aa11.72□□□□□ -0.53
LINC01220-202ENST00000561000 ZNF561-AS1K7EIQ3 104 aa11.71□□□□□ -0.53
LINC01220-202ENST00000561000 RAB5AP20339 215 aa11.71□□□□□ -0.53
LINC01220-202ENST00000561000 ZC2HC1BQ5TFG8 222 aa11.71□□□□□ -0.53
LINC01220-202ENST00000561000 CD164L2Q6UWJ8 174 aa11.71□□□□□ -0.53
LINC01220-202ENST00000561000 URB1-AS1Q96HZ7 61 aa11.71□□□□□ -0.53
LINC01220-202ENST00000561000 LINC00474Q9P2X8 69 aa11.71□□□□□ -0.53
LINC01220-202ENST00000561000 COX19Q49B96 90 aa11.7□□□□□ -0.54
LINC01220-202ENST00000561000 TIMM21Q9BVV7 248 aa11.7□□□□□ -0.54
LINC01220-202ENST00000561000 SMCO4Q9NRQ5 59 aa11.7□□□□□ -0.54
LINC01220-202ENST00000561000 PKIGQ9Y2B9 76 aa11.7□□□□□ -0.54
LINC01220-202ENST00000561000 CSDC2Q9Y534 153 aaKnown RBP11.7□□□□□ -0.54
LINC01220-202ENST00000561000 PRR3P79522 188 aaKnown RBP11.69□□□□□ -0.54
LINC01220-202ENST00000561000 SYCNQ0VAF6 134 aa11.69□□□□□ -0.54
LINC01220-202ENST00000561000 MALP21145 153 aa11.68□□□□□ -0.54
LINC01220-202ENST00000561000 C2orf66Q6UXQ4 117 aa11.68□□□□□ -0.54
LINC01220-202ENST00000561000 C18orf32Q8TCD1 76 aa11.68□□□□□ -0.54
LINC01220-202ENST00000561000 NXT2Q9NPJ8 142 aaKnown RBP11.68□□□□□ -0.54
LINC01220-202ENST00000561000 UBR4Q5T4S7 5183 aa11.68□□□□□ -0.54
LINC01220-202ENST00000561000 IGLV4-3A0A075B6K6 122 aa11.67□□□□□ -0.54
LINC01220-202ENST00000561000 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
LINC01220-202ENST00000561000 C1orf196B1AJZ1 125 aa11.67□□□□□ -0.54
LINC01220-202ENST00000561000 SPANXA1Q9NS26 97 aa11.67□□□□□ -0.54
LINC01220-202ENST00000561000 LINC00173Q6ZV60 143 aa11.66□□□□□ -0.54
LINC01220-202ENST00000561000 TMEM18Q96B42 140 aa11.66□□□□□ -0.54
LINC01220-202ENST00000561000 IGLV4-69A0A075B6H9 119 aa11.65□□□□□ -0.54
LINC01220-202ENST00000561000 LINC01546A6NGU7 62 aa11.65□□□□□ -0.54
LINC01220-202ENST00000561000 COX7A2LO14548 114 aa11.65□□□□□ -0.54
LINC01220-202ENST00000561000 SMAGPQ0VAQ4 97 aa11.65□□□□□ -0.54
LINC01220-202ENST00000561000 GAGE2BQ13066 116 aa11.65□□□□□ -0.54
LINC01220-202ENST00000561000 CYSLTR1Q9Y271 337 aa11.65□□□□□ -0.54
LINC01220-202ENST00000561000 A0A096LNJ9 63 aa11.64□□□□□ -0.55
LINC01220-202ENST00000561000 IGIPA6NJ69 53 aa11.64□□□□□ -0.55
LINC01220-202ENST00000561000 COLCA2A8K830 154 aa11.64□□□□□ -0.55
LINC01220-202ENST00000561000 MRPS36P82909 103 aaKnown RBP11.64□□□□□ -0.55
LINC01220-202ENST00000561000 ORMDL2Q53FV1 153 aa11.64□□□□□ -0.55
LINC01220-202ENST00000561000 LINC01600Q96MT4 127 aa11.64□□□□□ -0.55
LINC01220-202ENST00000561000 PMCHL1Q16048 86 aa11.63□□□□□ -0.55
LINC01220-202ENST00000561000 C5orf38Q86SI9 138 aa11.63□□□□□ -0.55
LINC01220-202ENST00000561000 PYGO1Q9Y3Y4 419 aa11.63□□□□□ -0.55
LINC01220-202ENST00000561000 LOC107984640A0A0U1RRK4 108 aa11.62□□□□□ -0.55
LINC01220-202ENST00000561000 PTTG1IPP53801 180 aa11.62□□□□□ -0.55
LINC01220-202ENST00000561000 CAMK2N2Q96S95 79 aa11.62□□□□□ -0.55
LINC01220-202ENST00000561000 IFITM10A6NMD0 228 aa11.61□□□□□ -0.55
LINC01220-202ENST00000561000 TRGC2P03986 189 aa11.61□□□□□ -0.55
LINC01220-202ENST00000561000 SPINK6Q6UWN8 80 aa11.61□□□□□ -0.55
LINC01220-202ENST00000561000 Q6ZRP5 223 aa11.61□□□□□ -0.55
LINC01220-202ENST00000561000 TOMM6Q96B49 74 aa11.61□□□□□ -0.55
LINC01220-202ENST00000561000 K7EMI3 77 aa11.6□□□□□ -0.55
LINC01220-202ENST00000561000 FA2HQ7L5A8 372 aa11.6□□□□□ -0.55
LINC01220-202ENST00000561000 TMEM141Q96I45 108 aa11.6□□□□□ -0.55
LINC01220-202ENST00000561000 A0A1W2PNN7 141 aa11.58□□□□□ -0.56
LINC01220-202ENST00000561000 APOMO95445 188 aa11.58□□□□□ -0.56
LINC01220-202ENST00000561000 ODF1Q14990 250 aa11.58□□□□□ -0.56
LINC01220-202ENST00000561000 REG3GQ6UW15 175 aa11.58□□□□□ -0.56
LINC01220-202ENST00000561000 AMELXQ99217 191 aa11.58□□□□□ -0.56
LINC01220-202ENST00000561000 SRSF9Q13242 221 aaKnown RBP eCLIP11.57□□□□□ -0.56
LINC01220-202ENST00000561000 LINC00242Q5T6M2 205 aa11.57□□□□□ -0.56
LINC01220-202ENST00000561000 C2orf48Q96LS8 159 aa11.57□□□□□ -0.56
LINC01220-202ENST00000561000 TNXBP22105 4242 aa11.56□□□□□ -0.56
LINC01220-202ENST00000561000 A0A0J9YXV3 536 aa11.56□□□□□ -0.56
LINC01220-202ENST00000561000 LINC00614P0C842 121 aa11.56□□□□□ -0.56
LINC01220-202ENST00000561000 UBE2D1P51668 147 aa11.56□□□□□ -0.56
LINC01220-202ENST00000561000 LINC00310P59036 64 aa11.56□□□□□ -0.56
LINC01220-202ENST00000561000 RPL18AQ02543 176 aaKnown RBP11.56□□□□□ -0.56
LINC01220-202ENST00000561000 SPAG11BQ08648 103 aa11.56□□□□□ -0.56
LINC01220-202ENST00000561000 SCGB3A1Q96QR1 104 aa11.56□□□□□ -0.56
LINC01220-202ENST00000561000 IGHV3OR16-9A0A0B4J2B5 98 aa11.55□□□□□ -0.56
LINC01220-202ENST00000561000 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.55□□□□□ -0.56
LINC01220-202ENST00000561000 C9orf116Q5BN46 136 aaPredicted RBP11.55□□□□□ -0.56
LINC01220-202ENST00000561000 TEX43Q6ZNM6 134 aa11.55□□□□□ -0.56
LINC01220-202ENST00000561000 TIMM17AQ99595 171 aa11.55□□□□□ -0.56
LINC01220-202ENST00000561000 ERASQ7Z444 233 aa11.54□□□□□ -0.56
LINC01220-202ENST00000561000 KRTAP10-8P60410 259 aa11.53□□□□□ -0.56
LINC01220-202ENST00000561000 VCX2Q9H322 139 aa11.53□□□□□ -0.56
LINC01220-202ENST00000561000 ATP6V1G1O75348 118 aa11.52□□□□□ -0.57
LINC01220-202ENST00000561000 OR10D4PQ8NGN7 298 aa11.52□□□□□ -0.57
LINC01220-202ENST00000561000 ORAOV1Q8WV07 137 aa11.52□□□□□ -0.57
LINC01220-202ENST00000561000 NUPR1O60356 82 aa11.51□□□□□ -0.57
LINC01220-202ENST00000561000 PDZD11Q5EBL8 140 aa11.51□□□□□ -0.57
LINC01220-202ENST00000561000 Q6ZN92 141 aa11.51□□□□□ -0.57
LINC01220-202ENST00000561000 RNF151Q2KHN1 245 aa11.5□□□□□ -0.57
LINC01220-202ENST00000561000 PHF5AQ7RTV0 110 aaKnown RBP11.5□□□□□ -0.57
LINC01220-202ENST00000561000 PSORS1C2Q9UIG4 136 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms