RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 Q6ZUT4 128 aa5.24□□□□□ -1.57
LRRC28-219ENST00000560483 MRPL52Q86TS9 123 aaKnown RBP5.24□□□□□ -1.57
LRRC28-219ENST00000560483 Q8N8P6 123 aa5.24□□□□□ -1.57
LRRC28-219ENST00000560483 NXT2Q9NPJ8 142 aaKnown RBP5.24□□□□□ -1.57
LRRC28-219ENST00000560483 SPANXA1Q9NS26 97 aa5.24□□□□□ -1.57
LRRC28-219ENST00000560483 TRAPPC1Q9Y5R8 145 aa5.24□□□□□ -1.57
LRRC28-219ENST00000560483 HERC2O95714 4834 aa5.23□□□□□ -1.57
LRRC28-219ENST00000560483 TGIF2-C20orf24A0A0A6YYL0 155 aa5.23□□□□□ -1.57
LRRC28-219ENST00000560483 C1orf196B1AJZ1 125 aa5.23□□□□□ -1.57
LRRC28-219ENST00000560483 ZNF561-AS1K7EIQ3 104 aa5.23□□□□□ -1.57
LRRC28-219ENST00000560483 MT-ND6P03923 174 aa5.23□□□□□ -1.57
LRRC28-219ENST00000560483 ANKRD39Q53RE8 183 aa5.23□□□□□ -1.57
LRRC28-219ENST00000560483 FA2HQ7L5A8 372 aa5.23□□□□□ -1.57
LRRC28-219ENST00000560483 OPRPNQ99935 248 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-219ENST00000560483 C2orf88Q9BSF0 95 aa5.23□□□□□ -1.57
LRRC28-219ENST00000560483 GNB1LQ9BYB4 327 aa5.23□□□□□ -1.57
LRRC28-219ENST00000560483 CYSLTR1Q9Y271 337 aa5.23□□□□□ -1.57
LRRC28-219ENST00000560483 COX7A2LO14548 114 aa5.22□□□□□ -1.57
LRRC28-219ENST00000560483 SMR3BP02814 79 aaPredicted RBP5.22□□□□□ -1.57
LRRC28-219ENST00000560483 G0S2P27469 103 aa5.22□□□□□ -1.57
LRRC28-219ENST00000560483 CD164L2Q6UWJ8 174 aa5.22□□□□□ -1.57
LRRC28-219ENST00000560483 C2orf66Q6UXQ4 117 aa5.22□□□□□ -1.57
LRRC28-219ENST00000560483 TEX43Q6ZNM6 134 aa5.22□□□□□ -1.57
LRRC28-219ENST00000560483 C5orf38Q86SI9 138 aa5.22□□□□□ -1.57
LRRC28-219ENST00000560483 SLC7A5P1Q8MH63 180 aa5.22□□□□□ -1.57
LRRC28-219ENST00000560483 APOBP04114 4563 aaKnown RBP5.21□□□□□ -1.58
LRRC28-219ENST00000560483 IGHV1-58A0A0C4DH39 117 aa5.21□□□□□ -1.58
LRRC28-219ENST00000560483 APOMO95445 188 aa5.21□□□□□ -1.58
LRRC28-219ENST00000560483 FOXI1Q12951 378 aa5.21□□□□□ -1.58
LRRC28-219ENST00000560483 TMEM141Q96I45 108 aa5.21□□□□□ -1.58
LRRC28-219ENST00000560483 TIMM21Q9BVV7 248 aa5.21□□□□□ -1.58
LRRC28-219ENST00000560483 VCX2Q9H322 139 aa5.21□□□□□ -1.58
LRRC28-219ENST00000560483 CSDC2Q9Y534 153 aaKnown RBP5.21□□□□□ -1.58
LRRC28-219ENST00000560483 IGHV3-64A0A075B6Q5 118 aa5.2□□□□□ -1.58
LRRC28-219ENST00000560483 EPM2AB3EWF7 344 aa5.2□□□□□ -1.58
LRRC28-219ENST00000560483 KRTAP26-1Q6PEX3 210 aa5.2□□□□□ -1.58
LRRC28-219ENST00000560483 C15orf56Q8N910 161 aa5.2□□□□□ -1.58
LRRC28-219ENST00000560483 LINC00526Q96FQ7 95 aa5.2□□□□□ -1.58
LRRC28-219ENST00000560483 SCGB3A1Q96QR1 104 aa5.2□□□□□ -1.58
LRRC28-219ENST00000560483 FAM30AQ9NZY2 134 aa5.2□□□□□ -1.58
LRRC28-219ENST00000560483 HSPG2P98160 4391 aa5.19□□□□□ -1.58
LRRC28-219ENST00000560483 K7EMI3 77 aa5.19□□□□□ -1.58
LRRC28-219ENST00000560483 XGP55808 180 aa5.19□□□□□ -1.58
LRRC28-219ENST00000560483 NDUFA6P56556 154 aa5.19□□□□□ -1.58
LRRC28-219ENST00000560483 MRPS36P82909 103 aaKnown RBP5.19□□□□□ -1.58
LRRC28-219ENST00000560483 PAPPA-AS1Q5QFB9 102 aa5.19□□□□□ -1.58
LRRC28-219ENST00000560483 ALKBH7Q9BT30 221 aaPredicted RBP5.19□□□□□ -1.58
LRRC28-219ENST00000560483 IGLV4-3A0A075B6K6 122 aa5.18□□□□□ -1.58
LRRC28-219ENST00000560483 IGKV2-24A0A0C4DH68 120 aa5.18□□□□□ -1.58
LRRC28-219ENST00000560483 CNBPP62633 177 aaKnown RBP5.18□□□□□ -1.58
LRRC28-219ENST00000560483 SPAG11BQ08648 103 aa5.18□□□□□ -1.58
LRRC28-219ENST00000560483 ZC2HC1BQ5TFG8 222 aa5.18□□□□□ -1.58
LRRC28-219ENST00000560483 Q5VSD8 79 aa5.18□□□□□ -1.58
LRRC28-219ENST00000560483 CBLN2Q8IUK8 224 aa5.18□□□□□ -1.58
LRRC28-219ENST00000560483 C9orf163Q8N9P6 203 aa5.18□□□□□ -1.58
LRRC28-219ENST00000560483 ORAOV1Q8WV07 137 aa5.18□□□□□ -1.58
LRRC28-219ENST00000560483 CARD19Q96LW7 228 aa5.18□□□□□ -1.58
LRRC28-219ENST00000560483 CAMK2N2Q96S95 79 aa5.18□□□□□ -1.58
LRRC28-219ENST00000560483 GEMIN7Q9H840 131 aaKnown RBP5.18□□□□□ -1.58
LRRC28-219ENST00000560483 PYGO1Q9Y3Y4 419 aa5.18□□□□□ -1.58
LRRC28-219ENST00000560483 IGLV4-69A0A075B6H9 119 aa5.17□□□□□ -1.58
LRRC28-219ENST00000560483 GVQW2A0A096LPI5 108 aaPredicted RBP5.17□□□□□ -1.58
LRRC28-219ENST00000560483 RAB5BP61020 215 aa5.17□□□□□ -1.58
LRRC28-219ENST00000560483 COX6A2Q02221 97 aa5.17□□□□□ -1.58
LRRC28-219ENST00000560483 SYCNQ0VAF6 134 aa5.17□□□□□ -1.58
LRRC28-219ENST00000560483 MAJINQ3KP22 176 aa5.17□□□□□ -1.58
LRRC28-219ENST00000560483 SCXQ7RTU7 201 aa5.17□□□□□ -1.58
LRRC28-219ENST00000560483 TOMM6Q96B49 74 aa5.17□□□□□ -1.58
LRRC28-219ENST00000560483 PACRGQ96M98 296 aaPredicted RBP5.17□□□□□ -1.58
LRRC28-219ENST00000560483 PKIGQ9Y2B9 76 aa5.17□□□□□ -1.58
LRRC28-219ENST00000560483 SCGB1D1O95968 90 aa5.16□□□□□ -1.58
LRRC28-219ENST00000560483 PRSS2P07478 247 aa5.16□□□□□ -1.58
LRRC28-219ENST00000560483 RPL18AQ02543 176 aaKnown RBP5.16□□□□□ -1.58
LRRC28-219ENST00000560483 CHAC1Q9BUX1 264 aa5.16□□□□□ -1.58
LRRC28-219ENST00000560483 TOMM7Q9P0U1 55 aa5.16□□□□□ -1.58
LRRC28-219ENST00000560483 LINC01549A6NIU2 74 aa5.15□□□□□ -1.59
LRRC28-219ENST00000560483 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.15□□□□□ -1.59
LRRC28-219ENST00000560483 LINC00614P0C842 121 aa5.15□□□□□ -1.59
LRRC28-219ENST00000560483 CHTF8P0CG12 524 aa5.15□□□□□ -1.59
LRRC28-219ENST00000560483 SEC11AP67812 179 aa5.15□□□□□ -1.59
LRRC28-219ENST00000560483 GAGE2BQ13066 116 aa5.15□□□□□ -1.59
LRRC28-219ENST00000560483 PMCHL1Q16048 86 aa5.15□□□□□ -1.59
LRRC28-219ENST00000560483 ERASQ7Z444 233 aa5.15□□□□□ -1.59
LRRC28-219ENST00000560483 BAGE3Q86Y29 109 aa5.15□□□□□ -1.59
LRRC28-219ENST00000560483 OR10D4PQ8NGN7 298 aa5.15□□□□□ -1.59
LRRC28-219ENST00000560483 CIRBP-AS1Q8TBR5 109 aa5.15□□□□□ -1.59
LRRC28-219ENST00000560483 C18orf32Q8TCD1 76 aa5.15□□□□□ -1.59
LRRC28-219ENST00000560483 TIMM17AQ99595 171 aa5.15□□□□□ -1.59
LRRC28-219ENST00000560483 DNAH8Q96JB1 4490 aa5.14□□□□□ -1.59
LRRC28-219ENST00000560483 IGIPA6NJ69 53 aa5.14□□□□□ -1.59
LRRC28-219ENST00000560483 NDUFA1O15239 70 aa5.14□□□□□ -1.59
LRRC28-219ENST00000560483 HBDP02042 147 aa5.14□□□□□ -1.59
LRRC28-219ENST00000560483 UBE2D1P51668 147 aa5.14□□□□□ -1.59
LRRC28-219ENST00000560483 CKS1BP61024 79 aa5.14□□□□□ -1.59
LRRC28-219ENST00000560483 HERVK_113P63121 156 aa5.14□□□□□ -1.59
LRRC28-219ENST00000560483 LINC00242Q5T6M2 205 aa5.14□□□□□ -1.59
LRRC28-219ENST00000560483 SDIM1Q6ZPB5 146 aa5.14□□□□□ -1.59
LRRC28-219ENST00000560483 LINC00469Q8N7U9 141 aa5.14□□□□□ -1.59
LRRC28-219ENST00000560483 IGHV3OR16-9A0A0B4J2B5 98 aa5.13□□□□□ -1.59
LRRC28-219ENST00000560483 A0A0J9YXV3 536 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms