RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 SPAG11BQ08648 103 aa8.87□□□□□ -0.99
TPM1-223ENST00000560445 PRELID3AQ96N28 172 aa8.87□□□□□ -0.99
TPM1-223ENST00000560445 TGIF2-C20orf24A0A0A6YYL0 155 aa8.86□□□□□ -0.99
TPM1-223ENST00000560445 IFITM10A6NMD0 228 aa8.86□□□□□ -0.99
TPM1-223ENST00000560445 NPYP01303 97 aa8.86□□□□□ -0.99
TPM1-223ENST00000560445 RNF151Q2KHN1 245 aa8.86□□□□□ -0.99
TPM1-223ENST00000560445 CLLU1Q5K131 121 aa8.86□□□□□ -0.99
TPM1-223ENST00000560445 RNASE13Q5GAN3 156 aaKnown RBP8.85□□□□□ -0.99
TPM1-223ENST00000560445 REG3GQ6UW15 175 aa8.85□□□□□ -0.99
TPM1-223ENST00000560445 Q6ZRP5 223 aa8.85□□□□□ -0.99
TPM1-223ENST00000560445 C5orf38Q86SI9 138 aa8.85□□□□□ -0.99
TPM1-223ENST00000560445 LINC00526Q96FQ7 95 aa8.85□□□□□ -0.99
TPM1-223ENST00000560445 IMMP2LQ96T52 175 aa8.85□□□□□ -0.99
TPM1-223ENST00000560445 K7EMI3 77 aa8.84□□□□□ -0.99
TPM1-223ENST00000560445 G0S2P27469 103 aa8.84□□□□□ -0.99
TPM1-223ENST00000560445 RPL39P62891 51 aaKnown RBP8.84□□□□□ -0.99
TPM1-223ENST00000560445 GAGE2BQ13066 116 aa8.84□□□□□ -0.99
TPM1-223ENST00000560445 UQCC3Q6UW78 93 aa8.84□□□□□ -0.99
TPM1-223ENST00000560445 Q6ZN92 141 aa8.84□□□□□ -0.99
TPM1-223ENST00000560445 C2orf88Q9BSF0 95 aa8.84□□□□□ -0.99
TPM1-223ENST00000560445 MAP1LC3AQ9H492 121 aa8.84□□□□□ -0.99
TPM1-223ENST00000560445 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
TPM1-223ENST00000560445 NDUFA1O15239 70 aa8.83□□□□□ -1
TPM1-223ENST00000560445 RPL18AQ02543 176 aaKnown RBP8.83□□□□□ -1
TPM1-223ENST00000560445 LCE2CQ5TA81 110 aa8.83□□□□□ -1
TPM1-223ENST00000560445 SPINK6Q6UWN8 80 aa8.83□□□□□ -1
TPM1-223ENST00000560445 ORAOV1Q8WV07 137 aa8.83□□□□□ -1
TPM1-223ENST00000560445 MRPL35Q9NZE8 188 aaKnown RBP8.83□□□□□ -1
TPM1-223ENST00000560445 LRP1Q07954 4544 aaKnown RBP8.81□□□□□ -1
TPM1-223ENST00000560445 IGHV3OR16-9A0A0B4J2B5 98 aa8.81□□□□□ -1
TPM1-223ENST00000560445 LOC389332A0A1B0GUA5 103 aa8.81□□□□□ -1
TPM1-223ENST00000560445 PRSS47A8MTI9 375 aa8.81□□□□□ -1
TPM1-223ENST00000560445 NPSP0C0P6 89 aa8.81□□□□□ -1
TPM1-223ENST00000560445 ORMDL2Q53FV1 153 aa8.81□□□□□ -1
TPM1-223ENST00000560445 PAPPA-AS1Q5QFB9 102 aa8.81□□□□□ -1
TPM1-223ENST00000560445 TEX43Q6ZNM6 134 aa8.81□□□□□ -1
TPM1-223ENST00000560445 TMEM141Q96I45 108 aa8.81□□□□□ -1
TPM1-223ENST00000560445 CTDSP1Q9GZU7 261 aa8.81□□□□□ -1
TPM1-223ENST00000560445 CYSLTR1Q9Y271 337 aa8.81□□□□□ -1
TPM1-223ENST00000560445 TMEM218A2RU14 115 aa8.79□□□□□ -1
TPM1-223ENST00000560445 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.79□□□□□ -1
TPM1-223ENST00000560445 Q8N8P6 123 aa8.79□□□□□ -1
TPM1-223ENST00000560445 NXT2Q9NPJ8 142 aaKnown RBP8.79□□□□□ -1
TPM1-223ENST00000560445 A0A087WZ39 114 aa8.78□□□□□ -1
TPM1-223ENST00000560445 MT-ND6P03923 174 aa8.78□□□□□ -1
TPM1-223ENST00000560445 S100PP25815 95 aa8.78□□□□□ -1
TPM1-223ENST00000560445 SEC11AP67812 179 aa8.78□□□□□ -1
TPM1-223ENST00000560445 LINC01561Q8N1V8 128 aa8.78□□□□□ -1
TPM1-223ENST00000560445 LINC01600Q96MT4 127 aa8.78□□□□□ -1
TPM1-223ENST00000560445 OPRPNQ99935 248 aaPredicted RBP8.78□□□□□ -1
TPM1-223ENST00000560445 FAT3Q8TDW7 4589 aa8.78□□□□□ -1
TPM1-223ENST00000560445 PKHD1L1Q86WI1 4243 aa8.77□□□□□ -1.01
TPM1-223ENST00000560445 IGLV4-3A0A075B6K6 122 aa8.77□□□□□ -1.01
TPM1-223ENST00000560445 TRAV9-1A0A075B6T8 112 aa8.77□□□□□ -1.01
TPM1-223ENST00000560445 LINC01549A6NIU2 74 aa8.77□□□□□ -1.01
TPM1-223ENST00000560445 TLX1NBP0CAT3 122 aa8.77□□□□□ -1.01
TPM1-223ENST00000560445 MT1HL1P0DM35 61 aa8.77□□□□□ -1.01
TPM1-223ENST00000560445 C9orf116Q5BN46 136 aaPredicted RBP8.77□□□□□ -1.01
TPM1-223ENST00000560445 TRBV30A0A0K0K1B3 111 aa8.76□□□□□ -1.01
TPM1-223ENST00000560445 PRSS2P07478 247 aa8.76□□□□□ -1.01
TPM1-223ENST00000560445 C2orf66Q6UXQ4 117 aa8.76□□□□□ -1.01
TPM1-223ENST00000560445 PACRGQ96M98 296 aaPredicted RBP8.76□□□□□ -1.01
TPM1-223ENST00000560445 SEC11CQ9BY50 192 aa8.76□□□□□ -1.01
TPM1-223ENST00000560445 VCX2Q9H322 139 aa8.76□□□□□ -1.01
TPM1-223ENST00000560445 LINC00242Q5T6M2 205 aa8.75□□□□□ -1.01
TPM1-223ENST00000560445 A0A0J9YXV3 536 aa8.74□□□□□ -1.01
TPM1-223ENST00000560445 IFITM2Q01629 132 aa8.74□□□□□ -1.01
TPM1-223ENST00000560445 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
TPM1-223ENST00000560445 ADCYAP1P18509 176 aa8.73□□□□□ -1.01
TPM1-223ENST00000560445 UBE2D1P51668 147 aa8.73□□□□□ -1.01
TPM1-223ENST00000560445 CKS1BP61024 79 aa8.73□□□□□ -1.01
TPM1-223ENST00000560445 COX19Q49B96 90 aa8.73□□□□□ -1.01
TPM1-223ENST00000560445 A0A1W2PNN7 141 aa8.72□□□□□ -1.01
TPM1-223ENST00000560445 HERVK_113P63121 156 aa8.72□□□□□ -1.01
TPM1-223ENST00000560445 COMMD7Q86VX2 200 aa8.72□□□□□ -1.01
TPM1-223ENST00000560445 HMCN2Q8NDA2 5059 aa8.71□□□□□ -1.02
TPM1-223ENST00000560445 NDUFC2-KCTD14E9PQ53 114 aa8.71□□□□□ -1.02
TPM1-223ENST00000560445 SRSF9Q13242 221 aaKnown RBP eCLIP8.71□□□□□ -1.02
TPM1-223ENST00000560445 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
TPM1-223ENST00000560445 DIRC1Q969H9 104 aa8.71□□□□□ -1.02
TPM1-223ENST00000560445 AMELXQ99217 191 aa8.71□□□□□ -1.02
TPM1-223ENST00000560445 TIMM17AQ99595 171 aa8.71□□□□□ -1.02
TPM1-223ENST00000560445 GNB1LQ9BYB4 327 aa8.71□□□□□ -1.02
TPM1-223ENST00000560445 GEMIN7Q9H840 131 aaKnown RBP8.71□□□□□ -1.02
TPM1-223ENST00000560445 C6orf48Q9UBA6 75 aa8.71□□□□□ -1.02
TPM1-223ENST00000560445 PSORS1C2Q9UIG4 136 aa8.71□□□□□ -1.02
TPM1-223ENST00000560445 KIAA1644Q3SXP7 199 aa8.7□□□□□ -1.02
TPM1-223ENST00000560445 C1orf137Q5JT78 98 aa8.7□□□□□ -1.02
TPM1-223ENST00000560445 CXCL5P42830 114 aa8.69□□□□□ -1.02
TPM1-223ENST00000560445 GAGE2EQ4V326 116 aa8.69□□□□□ -1.02
TPM1-223ENST00000560445 C6orf226Q5I0X4 101 aa8.69□□□□□ -1.02
TPM1-223ENST00000560445 FAM19A3Q7Z5A8 133 aa8.69□□□□□ -1.02
TPM1-223ENST00000560445 Q8IZM0 81 aa8.69□□□□□ -1.02
TPM1-223ENST00000560445 GAGE2DQ9UEU5 116 aa8.69□□□□□ -1.02
TPM1-223ENST00000560445 IGIPA6NJ69 53 aa8.68□□□□□ -1.02
TPM1-223ENST00000560445 UBE2BP63146 152 aa8.68□□□□□ -1.02
TPM1-223ENST00000560445 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
TPM1-223ENST00000560445 RHEBQ15382 184 aa8.68□□□□□ -1.02
TPM1-223ENST00000560445 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
TPM1-223ENST00000560445 PHF5AQ7RTV0 110 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms