RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 GAGE2BQ13066 116 aa7.71□□□□□ -1.18
RABGGTA-213ENST00000560127 RNASEKQ6P5S7 137 aaKnown RBP7.71□□□□□ -1.18
RABGGTA-213ENST00000560127 ORMDL3Q8N138 153 aa7.71□□□□□ -1.18
RABGGTA-213ENST00000560127 PRELID3AQ96N28 172 aa7.71□□□□□ -1.18
RABGGTA-213ENST00000560127 UBE2D4Q9Y2X8 147 aa7.71□□□□□ -1.18
RABGGTA-213ENST00000560127 IGLV1-50A0A075B6I6 118 aa7.7□□□□□ -1.18
RABGGTA-213ENST00000560127 IGHV1-58A0A0C4DH39 117 aa7.7□□□□□ -1.18
RABGGTA-213ENST00000560127 TCAPO15273 167 aa7.7□□□□□ -1.18
RABGGTA-213ENST00000560127 PPP1R17O96001 155 aa7.7□□□□□ -1.18
RABGGTA-213ENST00000560127 PPBPP02775 128 aa7.7□□□□□ -1.18
RABGGTA-213ENST00000560127 ZNF25P17030 456 aaPredicted RBP7.7□□□□□ -1.18
RABGGTA-213ENST00000560127 RPL39P62891 51 aaKnown RBP7.7□□□□□ -1.18
RABGGTA-213ENST00000560127 SYCNQ0VAF6 134 aa7.7□□□□□ -1.18
RABGGTA-213ENST00000560127 CDC42SE2Q9NRR3 84 aa7.7□□□□□ -1.18
RABGGTA-213ENST00000560127 LOC107984640A0A0U1RRK4 108 aa7.69□□□□□ -1.18
RABGGTA-213ENST00000560127 PRSS47A8MTI9 375 aa7.69□□□□□ -1.18
RABGGTA-213ENST00000560127 H0Y9J4 135 aa7.69□□□□□ -1.18
RABGGTA-213ENST00000560127 IGLV7-43P04211 117 aa7.69□□□□□ -1.18
RABGGTA-213ENST00000560127 KRTAP1-4P0C5Y4 121 aa7.69□□□□□ -1.18
RABGGTA-213ENST00000560127 RHEBQ15382 184 aa7.69□□□□□ -1.18
RABGGTA-213ENST00000560127 C9orf116Q5BN46 136 aaPredicted RBP7.69□□□□□ -1.18
RABGGTA-213ENST00000560127 RNASE13Q5GAN3 156 aaKnown RBP7.69□□□□□ -1.18
RABGGTA-213ENST00000560127 AMMECR1LQ6DCA0 310 aa7.69□□□□□ -1.18
RABGGTA-213ENST00000560127 Q6ZUT4 128 aa7.69□□□□□ -1.18
RABGGTA-213ENST00000560127 PHF5AQ7RTV0 110 aaKnown RBP7.69□□□□□ -1.18
RABGGTA-213ENST00000560127 TRAV9-1A0A075B6T8 112 aa7.68□□□□□ -1.18
RABGGTA-213ENST00000560127 FCER1GP30273 86 aa7.68□□□□□ -1.18
RABGGTA-213ENST00000560127 XCL1P47992 114 aa7.68□□□□□ -1.18
RABGGTA-213ENST00000560127 KIAA1644Q3SXP7 199 aa7.68□□□□□ -1.18
RABGGTA-213ENST00000560127 OR5A1Q8NGJ0 315 aa7.68□□□□□ -1.18
RABGGTA-213ENST00000560127 YPEL4Q96NS1 127 aa7.68□□□□□ -1.18
RABGGTA-213ENST00000560127 KIR2DL4Q99706 377 aa7.68□□□□□ -1.18
RABGGTA-213ENST00000560127 OPRPNQ99935 248 aaPredicted RBP7.67□□□□□ -1.18
RABGGTA-213ENST00000560127 RPS10P5Q9NQ39 176 aa7.67□□□□□ -1.18
RABGGTA-213ENST00000560127 TGIF2-C20orf24A0A0A6YYL0 155 aa7.66□□□□□ -1.18
RABGGTA-213ENST00000560127 LINC00959A0A1B0GUT2 108 aa7.66□□□□□ -1.18
RABGGTA-213ENST00000560127 ZNF561-AS1K7EIQ3 104 aa7.66□□□□□ -1.18
RABGGTA-213ENST00000560127 CCL25O15444 150 aa7.66□□□□□ -1.18
RABGGTA-213ENST00000560127 APOC3P02656 99 aa7.66□□□□□ -1.18
RABGGTA-213ENST00000560127 TIMM21Q9BVV7 248 aa7.66□□□□□ -1.18
RABGGTA-213ENST00000560127 LAMTOR2Q9Y2Q5 125 aa7.66□□□□□ -1.18
RABGGTA-213ENST00000560127 CSDC2Q9Y534 153 aaKnown RBP7.66□□□□□ -1.18
RABGGTA-213ENST00000560127 LOC389332A0A1B0GUA5 103 aa7.65□□□□□ -1.18
RABGGTA-213ENST00000560127 KRTAP11-1Q8IUC1 163 aa7.65□□□□□ -1.18
RABGGTA-213ENST00000560127 SLC7A5P1Q8MH63 180 aa7.65□□□□□ -1.18
RABGGTA-213ENST00000560127 Q8N8P6 123 aa7.65□□□□□ -1.18
RABGGTA-213ENST00000560127 GNB1LQ9BYB4 327 aa7.65□□□□□ -1.18
RABGGTA-213ENST00000560127 TMEM101Q96IK0 257 aa7.64□□□□□ -1.19
RABGGTA-213ENST00000560127 MAP1LC3AQ9H492 121 aa7.64□□□□□ -1.19
RABGGTA-213ENST00000560127 CRCT1Q9UGL9 99 aa7.64□□□□□ -1.19
RABGGTA-213ENST00000560127 IGLV4-69A0A075B6H9 119 aa7.63□□□□□ -1.19
RABGGTA-213ENST00000560127 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.63□□□□□ -1.19
RABGGTA-213ENST00000560127 APOMO95445 188 aa7.63□□□□□ -1.19
RABGGTA-213ENST00000560127 IFI27P40305 119 aaPredicted RBP7.63□□□□□ -1.19
RABGGTA-213ENST00000560127 UBE2D1P51668 147 aa7.63□□□□□ -1.19
RABGGTA-213ENST00000560127 LCE2DQ5TA82 110 aaPredicted RBP7.63□□□□□ -1.19
RABGGTA-213ENST00000560127 ALKBH7Q9BT30 221 aaPredicted RBP7.63□□□□□ -1.19
RABGGTA-213ENST00000560127 IGLV4-3A0A075B6K6 122 aa7.62□□□□□ -1.19
RABGGTA-213ENST00000560127 A0A087WZ39 114 aa7.62□□□□□ -1.19
RABGGTA-213ENST00000560127 S100PP25815 95 aa7.62□□□□□ -1.19
RABGGTA-213ENST00000560127 RPL13AP40429 203 aaKnown RBP7.62□□□□□ -1.19
RABGGTA-213ENST00000560127 MRPS36P82909 103 aaKnown RBP7.62□□□□□ -1.19
RABGGTA-213ENST00000560127 SVBPQ8N300 66 aa7.62□□□□□ -1.19
RABGGTA-213ENST00000560127 MRPL18Q9H0U6 180 aaKnown RBP7.62□□□□□ -1.19
RABGGTA-213ENST00000560127 SPANXA1Q9NS26 97 aa7.62□□□□□ -1.19
RABGGTA-213ENST00000560127 SNAPINO95295 136 aa7.61□□□□□ -1.19
RABGGTA-213ENST00000560127 TSPAN13O95857 204 aa7.61□□□□□ -1.19
RABGGTA-213ENST00000560127 RPL18AQ02543 176 aaKnown RBP7.61□□□□□ -1.19
RABGGTA-213ENST00000560127 ZC2HC1BQ5TFG8 222 aa7.61□□□□□ -1.19
RABGGTA-213ENST00000560127 CD164L2Q6UWJ8 174 aa7.61□□□□□ -1.19
RABGGTA-213ENST00000560127 LINC00173Q6ZV60 143 aa7.61□□□□□ -1.19
RABGGTA-213ENST00000560127 TRAV13-1A0A0B4J241 112 aa7.6□□□□□ -1.19
RABGGTA-213ENST00000560127 LINC01546A6NGU7 62 aa7.6□□□□□ -1.19
RABGGTA-213ENST00000560127 CBLN2Q8IUK8 224 aa7.6□□□□□ -1.19
RABGGTA-213ENST00000560127 URB1-AS1Q96HZ7 61 aa7.6□□□□□ -1.19
RABGGTA-213ENST00000560127 CAMK2N2Q96S95 79 aa7.6□□□□□ -1.19
RABGGTA-213ENST00000560127 PYGO1Q9Y3Y4 419 aa7.6□□□□□ -1.19
RABGGTA-213ENST00000560127 IGIPA6NJ69 53 aa7.59□□□□□ -1.19
RABGGTA-213ENST00000560127 RAB5AP20339 215 aa7.59□□□□□ -1.19
RABGGTA-213ENST00000560127 C2orf66Q6UXQ4 117 aa7.59□□□□□ -1.19
RABGGTA-213ENST00000560127 NXT2Q9NPJ8 142 aaKnown RBP7.59□□□□□ -1.19
RABGGTA-213ENST00000560127 FAM168BA1KXE4 195 aa7.58□□□□□ -1.2
RABGGTA-213ENST00000560127 SS18Q15532 418 aa7.58□□□□□ -1.2
RABGGTA-213ENST00000560127 NDUFA5Q16718 116 aa7.58□□□□□ -1.2
RABGGTA-213ENST00000560127 TMEM18Q96B42 140 aa7.58□□□□□ -1.2
RABGGTA-213ENST00000560127 A0A096LNJ9 63 aa7.57□□□□□ -1.2
RABGGTA-213ENST00000560127 IGHV3OR16-9A0A0B4J2B5 98 aa7.57□□□□□ -1.2
RABGGTA-213ENST00000560127 C1orf196B1AJZ1 125 aa7.57□□□□□ -1.2
RABGGTA-213ENST00000560127 FABP9Q0Z7S8 132 aa7.57□□□□□ -1.2
RABGGTA-213ENST00000560127 COX19Q49B96 90 aa7.57□□□□□ -1.2
RABGGTA-213ENST00000560127 AMELXQ99217 191 aa7.57□□□□□ -1.2
RABGGTA-213ENST00000560127 CYSLTR1Q9Y271 337 aa7.57□□□□□ -1.2
RABGGTA-213ENST00000560127 IFITM10A6NMD0 228 aa7.56□□□□□ -1.2
RABGGTA-213ENST00000560127 K7EMI3 77 aa7.56□□□□□ -1.2
RABGGTA-213ENST00000560127 MALP21145 153 aa7.56□□□□□ -1.2
RABGGTA-213ENST00000560127 SMAGPQ0VAQ4 97 aa7.56□□□□□ -1.2
RABGGTA-213ENST00000560127 ORMDL2Q53FV1 153 aa7.56□□□□□ -1.2
RABGGTA-213ENST00000560127 C5orf38Q86SI9 138 aa7.56□□□□□ -1.2
RABGGTA-213ENST00000560127 C18orf32Q8TCD1 76 aa7.56□□□□□ -1.2
RABGGTA-213ENST00000560127 TMEM141Q96I45 108 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms