RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 COX6A2Q02221 97 aa7□□□□□ -1.29
TPM1-221ENST00000559831 ATOH7Q8N100 152 aa7□□□□□ -1.29
TPM1-221ENST00000559831 RMI2Q96E14 147 aa7□□□□□ -1.29
TPM1-221ENST00000559831 LYSTQ99698 3801 aa7□□□□□ -1.29
TPM1-221ENST00000559831 VPS13DQ5THJ4 4388 aa6.99□□□□□ -1.29
TPM1-221ENST00000559831 PLNP26678 52 aa6.99□□□□□ -1.29
TPM1-221ENST00000559831 HERVK_113P63121 156 aa6.99□□□□□ -1.29
TPM1-221ENST00000559831 SEC11AP67812 179 aa6.99□□□□□ -1.29
TPM1-221ENST00000559831 LINC00469Q8N7U9 141 aa6.99□□□□□ -1.29
TPM1-221ENST00000559831 ZNF22P17026 224 aaPredicted RBP6.98□□□□□ -1.29
TPM1-221ENST00000559831 TMEM170BQ5T4T1 132 aa6.98□□□□□ -1.29
TPM1-221ENST00000559831 CD164L2Q6UWJ8 174 aa6.98□□□□□ -1.29
TPM1-221ENST00000559831 FAM19A3Q7Z5A8 133 aa6.98□□□□□ -1.29
TPM1-221ENST00000559831 C5orf38Q86SI9 138 aa6.98□□□□□ -1.29
TPM1-221ENST00000559831 NFE4Q86UQ8 179 aa6.98□□□□□ -1.29
TPM1-221ENST00000559831 LCE6AA0A183 80 aa6.97□□□□□ -1.29
TPM1-221ENST00000559831 FOXI1Q12951 378 aa6.97□□□□□ -1.29
TPM1-221ENST00000559831 JOSD1Q15040 202 aaPredicted RBP6.97□□□□□ -1.29
TPM1-221ENST00000559831 Q6ZR54 194 aa6.97□□□□□ -1.29
TPM1-221ENST00000559831 CDKN2A-AS1Q9UH64 79 aa6.97□□□□□ -1.29
TPM1-221ENST00000559831 IGHV3OR16-9A0A0B4J2B5 98 aa6.96□□□□□ -1.3
TPM1-221ENST00000559831 H3BRM9 83 aa6.96□□□□□ -1.3
TPM1-221ENST00000559831 COX7A2LO14548 114 aa6.96□□□□□ -1.3
TPM1-221ENST00000559831 PSCAO43653 123 aa6.96□□□□□ -1.3
TPM1-221ENST00000559831 SPINK8P0C7L1 97 aa6.96□□□□□ -1.3
TPM1-221ENST00000559831 PYY3Q5JQD4 70 aa6.96□□□□□ -1.3
TPM1-221ENST00000559831 KRTAP26-1Q6PEX3 210 aa6.96□□□□□ -1.3
TPM1-221ENST00000559831 TM2D2Q9BX73 214 aa6.96□□□□□ -1.3
TPM1-221ENST00000559831 DNAH1Q9P2D7 4330 aa6.95□□□□□ -1.3
TPM1-221ENST00000559831 IGHV3-64A0A075B6Q5 118 aa6.95□□□□□ -1.3
TPM1-221ENST00000559831 IGLV5-45A0A087WSX0 123 aa6.95□□□□□ -1.3
TPM1-221ENST00000559831 MALP21145 153 aa6.95□□□□□ -1.3
TPM1-221ENST00000559831 C6orf223Q8N319 242 aa6.95□□□□□ -1.3
TPM1-221ENST00000559831 COX11Q9Y6N1 276 aa6.95□□□□□ -1.3
TPM1-221ENST00000559831 hDV102S1A0JD36 115 aa6.94□□□□□ -1.3
TPM1-221ENST00000559831 TMEM223A0PJW6 202 aa6.94□□□□□ -1.3
TPM1-221ENST00000559831 HERVK_113P61574 105 aa6.94□□□□□ -1.3
TPM1-221ENST00000559831 C1orf134Q5TEV5 83 aa6.94□□□□□ -1.3
TPM1-221ENST00000559831 STPG4Q8N801 248 aa6.94□□□□□ -1.3
TPM1-221ENST00000559831 A0A087WZ39 114 aa6.93□□□□□ -1.3
TPM1-221ENST00000559831 HSBP1L1C9JCN9 74 aa6.93□□□□□ -1.3
TPM1-221ENST00000559831 MAJINQ3KP22 176 aa6.93□□□□□ -1.3
TPM1-221ENST00000559831 CDPF1Q6NVV7 123 aa6.93□□□□□ -1.3
TPM1-221ENST00000559831 SMIM1B2RUZ4 78 aa6.92□□□□□ -1.3
TPM1-221ENST00000559831 LECT2O14960 151 aa6.92□□□□□ -1.3
TPM1-221ENST00000559831 APOMO95445 188 aa6.92□□□□□ -1.3
TPM1-221ENST00000559831 MAPKAPK5-AS1Q8N8E1 139 aa6.92□□□□□ -1.3
TPM1-221ENST00000559831 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
TPM1-221ENST00000559831 TOMM7Q9P0U1 55 aa6.92□□□□□ -1.3
TPM1-221ENST00000559831 DNAH6Q9C0G6 4158 aa6.92□□□□□ -1.3
TPM1-221ENST00000559831 IGHV1-58A0A0C4DH39 117 aa6.91□□□□□ -1.3
TPM1-221ENST00000559831 HIGD2BQ4VC39 106 aa6.91□□□□□ -1.3
TPM1-221ENST00000559831 ANKRD39Q53RE8 183 aa6.91□□□□□ -1.3
TPM1-221ENST00000559831 Q6ZRN7 208 aaPredicted RBP6.91□□□□□ -1.3
TPM1-221ENST00000559831 LINC01561Q8N1V8 128 aa6.91□□□□□ -1.3
TPM1-221ENST00000559831 VAMP8Q9BV40 100 aa6.91□□□□□ -1.3
TPM1-221ENST00000559831 USP17L23D6RBM5 183 aa6.9□□□□□ -1.3
TPM1-221ENST00000559831 LEPROTO15243 131 aa6.9□□□□□ -1.3
TPM1-221ENST00000559831 PRSS2P07478 247 aa6.9□□□□□ -1.3
TPM1-221ENST00000559831 SMIM6P0DI80 62 aa6.9□□□□□ -1.3
TPM1-221ENST00000559831 SPAG11BQ08648 103 aa6.9□□□□□ -1.3
TPM1-221ENST00000559831 CFAP161Q6P656 301 aa6.9□□□□□ -1.3
TPM1-221ENST00000559831 C15orf56Q8N910 161 aa6.9□□□□□ -1.3
TPM1-221ENST00000559831 COX7B2Q8TF08 81 aa6.9□□□□□ -1.3
TPM1-221ENST00000559831 PAM16Q9Y3D7 125 aa6.9□□□□□ -1.3
TPM1-221ENST00000559831 IGLV5-39A0A0G2JS06 123 aa6.89□□□□□ -1.31
TPM1-221ENST00000559831 E9PLD3 99 aa6.89□□□□□ -1.31
TPM1-221ENST00000559831 NMUP48645 174 aa6.89□□□□□ -1.31
TPM1-221ENST00000559831 SPATA45Q537H7 98 aa6.89□□□□□ -1.31
TPM1-221ENST00000559831 PLEKHB2Q96CS7 222 aa6.89□□□□□ -1.31
TPM1-221ENST00000559831 LINC00526Q96FQ7 95 aa6.89□□□□□ -1.31
TPM1-221ENST00000559831 KMT2AQ03164 3969 aa6.89□□□□□ -1.31
TPM1-221ENST00000559831 IGKV2D-26A0A0A0MRZ7 120 aa6.88□□□□□ -1.31
TPM1-221ENST00000559831 ZNF561-AS1K7EIQ3 104 aa6.88□□□□□ -1.31
TPM1-221ENST00000559831 LGALS3P17931 250 aaKnown RBP6.88□□□□□ -1.31
TPM1-221ENST00000559831 TSPEAR-AS2P59090 65 aa6.88□□□□□ -1.31
TPM1-221ENST00000559831 S100A12P80511 92 aa6.88□□□□□ -1.31
TPM1-221ENST00000559831 WFDC2Q14508 124 aa6.88□□□□□ -1.31
TPM1-221ENST00000559831 GVQW2A0A096LPI5 108 aaPredicted RBP6.87□□□□□ -1.31
TPM1-221ENST00000559831 J3QQQ9 107 aa6.87□□□□□ -1.31
TPM1-221ENST00000559831 C6orf226Q5I0X4 101 aa6.87□□□□□ -1.31
TPM1-221ENST00000559831 Q8IZM0 81 aa6.87□□□□□ -1.31
TPM1-221ENST00000559831 RTL8CO15255 209 aa6.86□□□□□ -1.31
TPM1-221ENST00000559831 CKS1BP61024 79 aa6.86□□□□□ -1.31
TPM1-221ENST00000559831 KIAA0087Q14695 138 aa6.86□□□□□ -1.31
TPM1-221ENST00000559831 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
TPM1-221ENST00000559831 C12orf57Q99622 126 aa6.86□□□□□ -1.31
TPM1-221ENST00000559831 TTTY13Q9BZ97 58 aa6.86□□□□□ -1.31
TPM1-221ENST00000559831 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.85□□□□□ -1.31
TPM1-221ENST00000559831 A0A087WTM6 91 aa6.85□□□□□ -1.31
TPM1-221ENST00000559831 LRCOL1A6NCL2 159 aa6.85□□□□□ -1.31
TPM1-221ENST00000559831 C2orf82Q6UX34 121 aa6.85□□□□□ -1.31
TPM1-221ENST00000559831 PCP2Q8IVA1 136 aa6.85□□□□□ -1.31
TPM1-221ENST00000559831 CAMK2N2Q96S95 79 aa6.85□□□□□ -1.31
TPM1-221ENST00000559831 NDUFA12Q9UI09 145 aa6.85□□□□□ -1.31
TPM1-221ENST00000559831 SACSQ9NZJ4 4579 aa6.85□□□□□ -1.31
TPM1-221ENST00000559831 KMT2CQ8NEZ4 4911 aaKnown RBP6.84□□□□□ -1.31
TPM1-221ENST00000559831 ZNF815PA8K554 130 aa6.84□□□□□ -1.31
TPM1-221ENST00000559831 EREGO14944 169 aa6.84□□□□□ -1.31
TPM1-221ENST00000559831 TNP2Q05952 138 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms