RNA–Protein interactions for RNA: ENST00000559737.5

USP3-AS1-203, USP3 antisense RNA 1, humanhuman

TSL 1 (best)

Gene USP3-AS1, Length 1,434 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-203ENST00000559737 PACRGQ96M98 296 aaPredicted RBP12.35□□□□□ -0.43
USP3-AS1-203ENST00000559737 FAT2Q9NYQ8 4349 aa12.34□□□□□ -0.43
USP3-AS1-203ENST00000559737 TRAV12-1A0A0B4J245 112 aa12.34□□□□□ -0.43
USP3-AS1-203ENST00000559737 IGHV3OR16-9A0A0B4J2B5 98 aa12.34□□□□□ -0.43
USP3-AS1-203ENST00000559737 LRCOL1A6NCL2 159 aa12.34□□□□□ -0.43
USP3-AS1-203ENST00000559737 LECT2O14960 151 aa12.34□□□□□ -0.43
USP3-AS1-203ENST00000559737 WFDC2Q14508 124 aa12.34□□□□□ -0.43
USP3-AS1-203ENST00000559737 C5orf38Q86SI9 138 aa12.34□□□□□ -0.43
USP3-AS1-203ENST00000559737 S100A2P29034 98 aa12.33□□□□□ -0.44
USP3-AS1-203ENST00000559737 HIST1H2BLQ99880 126 aa12.33□□□□□ -0.44
USP3-AS1-203ENST00000559737 MAP1LC3CQ9BXW4 147 aa12.33□□□□□ -0.44
USP3-AS1-203ENST00000559737 IGLV4-69A0A075B6H9 119 aa12.32□□□□□ -0.44
USP3-AS1-203ENST00000559737 CHTOPQ9Y3Y2 248 aaKnown RBP12.32□□□□□ -0.44
USP3-AS1-203ENST00000559737 TINCRA0A1B0GVN0 87 aa12.31□□□□□ -0.44
USP3-AS1-203ENST00000559737 HERVK_113P63121 156 aa12.31□□□□□ -0.44
USP3-AS1-203ENST00000559737 SEC11AP67812 179 aa12.31□□□□□ -0.44
USP3-AS1-203ENST00000559737 ODF1Q14990 250 aa12.31□□□□□ -0.44
USP3-AS1-203ENST00000559737 GEMIN7Q9H840 131 aaKnown RBP12.31□□□□□ -0.44
USP3-AS1-203ENST00000559737 MRPL35Q9NZE8 188 aaKnown RBP12.31□□□□□ -0.44
USP3-AS1-203ENST00000559737 A0A087WTM6 91 aa12.3□□□□□ -0.44
USP3-AS1-203ENST00000559737 USP17L23D6RBM5 183 aa12.3□□□□□ -0.44
USP3-AS1-203ENST00000559737 COX7A2LO14548 114 aa12.3□□□□□ -0.44
USP3-AS1-203ENST00000559737 C3orf79P0CE67 100 aa12.3□□□□□ -0.44
USP3-AS1-203ENST00000559737 IGLC3P0DOY3 106 aa12.3□□□□□ -0.44
USP3-AS1-203ENST00000559737 SPATA12Q7Z6I5 190 aa12.3□□□□□ -0.44
USP3-AS1-203ENST00000559737 SYS1-DBNDD2H3BUS1 97 aa12.29□□□□□ -0.44
USP3-AS1-203ENST00000559737 LINC00336Q6ZUF6 198 aa12.29□□□□□ -0.44
USP3-AS1-203ENST00000559737 CHAC1Q9BUX1 264 aa12.29□□□□□ -0.44
USP3-AS1-203ENST00000559737 CDKN2A-AS1Q9UH64 79 aa12.29□□□□□ -0.44
USP3-AS1-203ENST00000559737 C11orf86A6NJI1 115 aa12.28□□□□□ -0.44
USP3-AS1-203ENST00000559737 F8VRH5 84 aa12.28□□□□□ -0.44
USP3-AS1-203ENST00000559737 KRTDAPP60985 99 aa12.28□□□□□ -0.44
USP3-AS1-203ENST00000559737 C15orf56Q8N910 161 aa12.28□□□□□ -0.44
USP3-AS1-203ENST00000559737 PMCHL2Q9BQD1 86 aa12.28□□□□□ -0.44
USP3-AS1-203ENST00000559737 A0A087WZ39 114 aa12.28□□□□□ -0.44
USP3-AS1-203ENST00000559737 LINC00469Q8N7U9 141 aa12.28□□□□□ -0.44
USP3-AS1-203ENST00000559737 IGLV5-45A0A087WSX0 123 aa12.27□□□□□ -0.45
USP3-AS1-203ENST00000559737 MALP21145 153 aa12.27□□□□□ -0.45
USP3-AS1-203ENST00000559737 ZNF22P17026 224 aaPredicted RBP12.26□□□□□ -0.45
USP3-AS1-203ENST00000559737 DNAH11Q96DT5 4516 aa12.25□□□□□ -0.45
USP3-AS1-203ENST00000559737 IGHV1-58A0A0C4DH39 117 aa12.25□□□□□ -0.45
USP3-AS1-203ENST00000559737 HIGD2BQ4VC39 106 aa12.25□□□□□ -0.45
USP3-AS1-203ENST00000559737 PET117Q6UWS5 81 aa12.25□□□□□ -0.45
USP3-AS1-203ENST00000559737 CFAP161Q6P656 301 aa12.24□□□□□ -0.45
USP3-AS1-203ENST00000559737 Q8N814 137 aa12.24□□□□□ -0.45
USP3-AS1-203ENST00000559737 IGHV3-64A0A075B6Q5 118 aa12.23□□□□□ -0.45
USP3-AS1-203ENST00000559737 TMEM170BQ5T4T1 132 aa12.23□□□□□ -0.45
USP3-AS1-203ENST00000559737 LINC01545Q5VT33 79 aa12.23□□□□□ -0.45
USP3-AS1-203ENST00000559737 LINC01561Q8N1V8 128 aa12.23□□□□□ -0.45
USP3-AS1-203ENST00000559737 PKD1P98161 4303 aa12.23□□□□□ -0.45
USP3-AS1-203ENST00000559737 APOMO95445 188 aa12.22□□□□□ -0.45
USP3-AS1-203ENST00000559737 SPINK8P0C7L1 97 aa12.22□□□□□ -0.45
USP3-AS1-203ENST00000559737 ORAOV1Q8WV07 137 aa12.22□□□□□ -0.45
USP3-AS1-203ENST00000559737 LINC00526Q96FQ7 95 aa12.22□□□□□ -0.45
USP3-AS1-203ENST00000559737 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.21□□□□□ -0.45
USP3-AS1-203ENST00000559737 hDV102S1A0JD36 115 aa12.21□□□□□ -0.45
USP3-AS1-203ENST00000559737 EREGO14944 169 aa12.21□□□□□ -0.45
USP3-AS1-203ENST00000559737 DPM2O94777 84 aa12.21□□□□□ -0.45
USP3-AS1-203ENST00000559737 FUSP35637 526 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP3-AS1-203ENST00000559737 C14orf177Q52M58 125 aa12.21□□□□□ -0.45
USP3-AS1-203ENST00000559737 GVQW2A0A096LPI5 108 aaPredicted RBP12.2□□□□□ -0.46
USP3-AS1-203ENST00000559737 SMIM1B2RUZ4 78 aa12.2□□□□□ -0.46
USP3-AS1-203ENST00000559737 H3BRM9 83 aa12.2□□□□□ -0.46
USP3-AS1-203ENST00000559737 IGKCP01834 107 aa12.2□□□□□ -0.46
USP3-AS1-203ENST00000559737 PLNP26678 52 aa12.2□□□□□ -0.46
USP3-AS1-203ENST00000559737 OR10D4PQ8NGN7 298 aa12.2□□□□□ -0.46
USP3-AS1-203ENST00000559737 A0A1B0GVY2 172 aa12.2□□□□□ -0.46
USP3-AS1-203ENST00000559737 KRTAP10-2P60368 255 aa12.19□□□□□ -0.46
USP3-AS1-203ENST00000559737 SPAG11BQ08648 103 aa12.19□□□□□ -0.46
USP3-AS1-203ENST00000559737 HECTD4Q9Y4D8 3996 aa12.18□□□□□ -0.46
USP3-AS1-203ENST00000559737 ZNF561-AS1K7EIQ3 104 aa12.18□□□□□ -0.46
USP3-AS1-203ENST00000559737 SLPIP03973 132 aa12.18□□□□□ -0.46
USP3-AS1-203ENST00000559737 KIAA0087Q14695 138 aa12.18□□□□□ -0.46
USP3-AS1-203ENST00000559737 TMEM223A0PJW6 202 aa12.17□□□□□ -0.46
USP3-AS1-203ENST00000559737 NTN5Q8WTR8 489 aaPredicted RBP12.17□□□□□ -0.46
USP3-AS1-203ENST00000559737 TOMM7Q9P0U1 55 aa12.17□□□□□ -0.46
USP3-AS1-203ENST00000559737 C20orf202A1L168 122 aa12.16□□□□□ -0.46
USP3-AS1-203ENST00000559737 IGLV5-39A0A0G2JS06 123 aa12.15□□□□□ -0.46
USP3-AS1-203ENST00000559737 Q8IZM0 81 aa12.13□□□□□ -0.47
USP3-AS1-203ENST00000559737 ATOH7Q8N100 152 aa12.13□□□□□ -0.47
USP3-AS1-203ENST00000559737 COX7B2Q8TF08 81 aa12.13□□□□□ -0.47
USP3-AS1-203ENST00000559737 PRSS2P07478 247 aa12.12□□□□□ -0.47
USP3-AS1-203ENST00000559737 CNBPP62633 177 aaKnown RBP12.12□□□□□ -0.47
USP3-AS1-203ENST00000559737 C6orf226Q5I0X4 101 aa12.12□□□□□ -0.47
USP3-AS1-203ENST00000559737 C2orf82Q6UX34 121 aa12.12□□□□□ -0.47
USP3-AS1-203ENST00000559737 C2orf48Q96LS8 159 aa12.12□□□□□ -0.47
USP3-AS1-203ENST00000559737 CAMK2N2Q96S95 79 aa12.12□□□□□ -0.47
USP3-AS1-203ENST00000559737 DNAH5Q8TE73 4624 aa12.12□□□□□ -0.47
USP3-AS1-203ENST00000559737 IGLV5-52A0A0A0MRZ9 124 aa12.11□□□□□ -0.47
USP3-AS1-203ENST00000559737 SYCNQ0VAF6 134 aa12.11□□□□□ -0.47
USP3-AS1-203ENST00000559737 PGPEP1Q9NXJ5 209 aa12.11□□□□□ -0.47
USP3-AS1-203ENST00000559737 C10orf25Q5T742 122 aa12.11□□□□□ -0.47
USP3-AS1-203ENST00000559737 UNQ6190/PRO20217Q6UXQ8 127 aa12.11□□□□□ -0.47
USP3-AS1-203ENST00000559737 Q6ZRU5 148 aa12.11□□□□□ -0.47
USP3-AS1-203ENST00000559737 STPG4Q8N801 248 aa12.11□□□□□ -0.47
USP3-AS1-203ENST00000559737 SCGB1D1O95968 90 aa12.1□□□□□ -0.47
USP3-AS1-203ENST00000559737 LINC01620Q4KN68 170 aa12.1□□□□□ -0.47
USP3-AS1-203ENST00000559737 NDUFA1O15239 70 aa12.09□□□□□ -0.47
USP3-AS1-203ENST00000559737 HERVK_113P61574 105 aa12.09□□□□□ -0.47
USP3-AS1-203ENST00000559737 CARD19Q96LW7 228 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms