RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 NAT8BQ9UHF3 227 aa8.03□□□□□ -1.12
TPM1-220ENST00000559556 UBE2D4Q9Y2X8 147 aa8.03□□□□□ -1.12
TPM1-220ENST00000559556 SMIM27A0A1W2PRY6 76 aa8.02□□□□□ -1.13
TPM1-220ENST00000559556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.02□□□□□ -1.13
TPM1-220ENST00000559556 C9orf116Q5BN46 136 aaPredicted RBP8.02□□□□□ -1.13
TPM1-220ENST00000559556 AMN1Q8IY45 258 aa8.02□□□□□ -1.13
TPM1-220ENST00000559556 VCYO14598 125 aa8.01□□□□□ -1.13
TPM1-220ENST00000559556 FCER1GP30273 86 aa8.01□□□□□ -1.13
TPM1-220ENST00000559556 RNASE13Q5GAN3 156 aaKnown RBP8.01□□□□□ -1.13
TPM1-220ENST00000559556 NRACQ8N912 160 aa8.01□□□□□ -1.13
TPM1-220ENST00000559556 A0A1B0GW15 77 aa8□□□□□ -1.13
TPM1-220ENST00000559556 SMKR1H3BMG3 65 aa8□□□□□ -1.13
TPM1-220ENST00000559556 PPP1R17O96001 155 aa8□□□□□ -1.13
TPM1-220ENST00000559556 MT-ND6P03923 174 aa8□□□□□ -1.13
TPM1-220ENST00000559556 SUMO2P61956 95 aaKnown RBP8□□□□□ -1.13
TPM1-220ENST00000559556 RPL18AQ02543 176 aaKnown RBP8□□□□□ -1.13
TPM1-220ENST00000559556 RNF151Q2KHN1 245 aa8□□□□□ -1.13
TPM1-220ENST00000559556 Q6ZUT4 128 aa8□□□□□ -1.13
TPM1-220ENST00000559556 KIR2DL4Q99706 377 aa8□□□□□ -1.13
TPM1-220ENST00000559556 TIMM21Q9BVV7 248 aa8□□□□□ -1.13
TPM1-220ENST00000559556 TRAV13-1A0A0B4J241 112 aa7.99□□□□□ -1.13
TPM1-220ENST00000559556 S100A8P05109 93 aa7.99□□□□□ -1.13
TPM1-220ENST00000559556 SPAG11BQ08648 103 aa7.99□□□□□ -1.13
TPM1-220ENST00000559556 RIGQ13278 110 aa7.99□□□□□ -1.13
TPM1-220ENST00000559556 COX19Q49B96 90 aa7.99□□□□□ -1.13
TPM1-220ENST00000559556 ATP5L2Q7Z4Y8 100 aa7.99□□□□□ -1.13
TPM1-220ENST00000559556 OR10D4PQ8NGN7 298 aa7.99□□□□□ -1.13
TPM1-220ENST00000559556 C1orf137Q5JT78 98 aa7.98□□□□□ -1.13
TPM1-220ENST00000559556 PHF5AQ7RTV0 110 aaKnown RBP7.98□□□□□ -1.13
TPM1-220ENST00000559556 C5orf38Q86SI9 138 aa7.98□□□□□ -1.13
TPM1-220ENST00000559556 TRBV24-1A0A075B6N3 115 aa7.97□□□□□ -1.13
TPM1-220ENST00000559556 OPRPNQ99935 248 aaPredicted RBP7.97□□□□□ -1.13
TPM1-220ENST00000559556 MRPL35Q9NZE8 188 aaKnown RBP7.97□□□□□ -1.13
TPM1-220ENST00000559556 F8WDY8 70 aa7.96□□□□□ -1.14
TPM1-220ENST00000559556 MRPL51Q4U2R6 128 aaKnown RBP7.96□□□□□ -1.14
TPM1-220ENST00000559556 CBLN2Q8IUK8 224 aa7.96□□□□□ -1.14
TPM1-220ENST00000559556 DIRC1Q969H9 104 aa7.96□□□□□ -1.14
TPM1-220ENST00000559556 TMEM18Q96B42 140 aa7.96□□□□□ -1.14
TPM1-220ENST00000559556 IGHV3OR16-9A0A0B4J2B5 98 aa7.95□□□□□ -1.14
TPM1-220ENST00000559556 IGLV7-43P04211 117 aa7.95□□□□□ -1.14
TPM1-220ENST00000559556 RPL32P62910 135 aaKnown RBP7.95□□□□□ -1.14
TPM1-220ENST00000559556 FAM104BQ5XKR9 115 aa7.95□□□□□ -1.14
TPM1-220ENST00000559556 ORAOV1Q8WV07 137 aa7.95□□□□□ -1.14
TPM1-220ENST00000559556 FAM104AQ969W3 186 aa7.95□□□□□ -1.14
TPM1-220ENST00000559556 H0Y9J4 135 aa7.94□□□□□ -1.14
TPM1-220ENST00000559556 NDUFA1O15239 70 aa7.94□□□□□ -1.14
TPM1-220ENST00000559556 TCAPO15273 167 aa7.94□□□□□ -1.14
TPM1-220ENST00000559556 SCO1O75880 301 aa7.94□□□□□ -1.14
TPM1-220ENST00000559556 TLX1NBP0CAT3 122 aa7.94□□□□□ -1.14
TPM1-220ENST00000559556 RPL39P62891 51 aaKnown RBP7.94□□□□□ -1.14
TPM1-220ENST00000559556 HBBP68871 147 aa7.94□□□□□ -1.14
TPM1-220ENST00000559556 PRR26Q8N8Z3 221 aa7.94□□□□□ -1.14
TPM1-220ENST00000559556 C20orf78Q9BR46 151 aa7.94□□□□□ -1.14
TPM1-220ENST00000559556 MRPL54Q6P161 138 aaKnown RBP7.93□□□□□ -1.14
TPM1-220ENST00000559556 KRTAP11-1Q8IUC1 163 aa7.93□□□□□ -1.14
TPM1-220ENST00000559556 YPEL4Q96NS1 127 aa7.93□□□□□ -1.14
TPM1-220ENST00000559556 SPANXA1Q9NS26 97 aa7.93□□□□□ -1.14
TPM1-220ENST00000559556 TGIF2-C20orf24A0A0A6YYL0 155 aa7.92□□□□□ -1.14
TPM1-220ENST00000559556 A0A1B0GXF2 115 aa7.92□□□□□ -1.14
TPM1-220ENST00000559556 FAM168BA1KXE4 195 aa7.92□□□□□ -1.14
TPM1-220ENST00000559556 COLCA2A8K830 154 aa7.92□□□□□ -1.14
TPM1-220ENST00000559556 MRPS36P82909 103 aaKnown RBP7.92□□□□□ -1.14
TPM1-220ENST00000559556 C10orf25Q5T742 122 aa7.92□□□□□ -1.14
TPM1-220ENST00000559556 SMIM2Q9BVW6 85 aa7.92□□□□□ -1.14
TPM1-220ENST00000559556 GNB1LQ9BYB4 327 aa7.92□□□□□ -1.14
TPM1-220ENST00000559556 MUC2Q02817 5179 aa7.92□□□□□ -1.14
TPM1-220ENST00000559556 C6orf48Q9UBA6 75 aa7.91□□□□□ -1.14
TPM1-220ENST00000559556 IGLV1-50A0A075B6I6 118 aa7.9□□□□□ -1.14
TPM1-220ENST00000559556 A0A087WZ39 114 aa7.9□□□□□ -1.14
TPM1-220ENST00000559556 TNFRSF6BO95407 300 aa7.9□□□□□ -1.14
TPM1-220ENST00000559556 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.14
TPM1-220ENST00000559556 RAB5AP20339 215 aa7.9□□□□□ -1.14
TPM1-220ENST00000559556 CKS2P33552 79 aa7.9□□□□□ -1.14
TPM1-220ENST00000559556 UNQ6190/PRO20217Q6UXQ8 127 aa7.9□□□□□ -1.14
TPM1-220ENST00000559556 FAM19A5Q7Z5A7 132 aaPredicted RBP7.9□□□□□ -1.14
TPM1-220ENST00000559556 IFITM10A6NMD0 228 aa7.89□□□□□ -1.15
TPM1-220ENST00000559556 KRTAP7-1Q8IUC3 87 aa7.89□□□□□ -1.15
TPM1-220ENST00000559556 TRAPPC1Q9Y5R8 145 aa7.89□□□□□ -1.15
TPM1-220ENST00000559556 D6R8Y8 96 aa7.88□□□□□ -1.15
TPM1-220ENST00000559556 KIAA0087Q14695 138 aa7.88□□□□□ -1.15
TPM1-220ENST00000559556 TMEM136Q6ZRR5 245 aa7.88□□□□□ -1.15
TPM1-220ENST00000559556 TRBV30A0A0K0K1B3 111 aa7.87□□□□□ -1.15
TPM1-220ENST00000559556 M0QXV9 152 aa7.87□□□□□ -1.15
TPM1-220ENST00000559556 NPYP01303 97 aa7.87□□□□□ -1.15
TPM1-220ENST00000559556 PPBPP02775 128 aa7.87□□□□□ -1.15
TPM1-220ENST00000559556 GAGE2EQ4V326 116 aa7.87□□□□□ -1.15
TPM1-220ENST00000559556 GAGE2DQ9UEU5 116 aa7.87□□□□□ -1.15
TPM1-220ENST00000559556 FABP9Q0Z7S8 132 aa7.86□□□□□ -1.15
TPM1-220ENST00000559556 MRPL18Q9H0U6 180 aaKnown RBP7.86□□□□□ -1.15
TPM1-220ENST00000559556 PYGO1Q9Y3Y4 419 aa7.86□□□□□ -1.15
TPM1-220ENST00000559556 NDUFC2-KCTD14E9PQ53 114 aa7.85□□□□□ -1.15
TPM1-220ENST00000559556 IFI27P40305 119 aaPredicted RBP7.85□□□□□ -1.15
TPM1-220ENST00000559556 RPL13AP40429 203 aaKnown RBP7.85□□□□□ -1.15
TPM1-220ENST00000559556 LINC00242Q5T6M2 205 aa7.85□□□□□ -1.15
TPM1-220ENST00000559556 IGLV4-3A0A075B6K6 122 aa7.84□□□□□ -1.15
TPM1-220ENST00000559556 UBE2BP63146 152 aa7.84□□□□□ -1.15
TPM1-220ENST00000559556 C9orf129Q5T035 196 aaKnown RBP7.84□□□□□ -1.15
TPM1-220ENST00000559556 ORMDL3Q8N138 153 aa7.84□□□□□ -1.15
TPM1-220ENST00000559556 LAMTOR2Q9Y2Q5 125 aa7.84□□□□□ -1.15
TPM1-220ENST00000559556 TRGC2P03986 189 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms