RNA–Protein interactions for RNA: ENST00000558955.2

PKNOX1-208, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 629 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-208ENST00000558955 IGKV2-24A0A0C4DH68 120 aa7.92□□□□□ -1.14
PKNOX1-208ENST00000558955 Q8N8P6 123 aa7.92□□□□□ -1.14
PKNOX1-208ENST00000558955 CARD19Q96LW7 228 aa7.92□□□□□ -1.14
PKNOX1-208ENST00000558955 A0A096LNI7 61 aa7.91□□□□□ -1.14
PKNOX1-208ENST00000558955 IFITM10A6NMD0 228 aa7.91□□□□□ -1.14
PKNOX1-208ENST00000558955 IFI27P40305 119 aaPredicted RBP7.91□□□□□ -1.14
PKNOX1-208ENST00000558955 SYCNQ0VAF6 134 aa7.91□□□□□ -1.14
PKNOX1-208ENST00000558955 MAJINQ3KP22 176 aa7.91□□□□□ -1.14
PKNOX1-208ENST00000558955 KIAA1644Q3SXP7 199 aa7.91□□□□□ -1.14
PKNOX1-208ENST00000558955 IGLV4-3A0A075B6K6 122 aa7.9□□□□□ -1.14
PKNOX1-208ENST00000558955 C10orf91Q5T1B1 145 aa7.9□□□□□ -1.14
PKNOX1-208ENST00000558955 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
PKNOX1-208ENST00000558955 PYGO1Q9Y3Y4 419 aa7.9□□□□□ -1.14
PKNOX1-208ENST00000558955 TRAV9-1A0A075B6T8 112 aa7.89□□□□□ -1.15
PKNOX1-208ENST00000558955 IGHV3OR16-9A0A0B4J2B5 98 aa7.89□□□□□ -1.15
PKNOX1-208ENST00000558955 HNRNPA3P51991 378 aaKnown RBP7.89□□□□□ -1.15
PKNOX1-208ENST00000558955 C2orf66Q6UXQ4 117 aa7.89□□□□□ -1.15
PKNOX1-208ENST00000558955 Q6ZRU5 148 aa7.89□□□□□ -1.15
PKNOX1-208ENST00000558955 APOMO95445 188 aa7.88□□□□□ -1.15
PKNOX1-208ENST00000558955 S100PP25815 95 aa7.88□□□□□ -1.15
PKNOX1-208ENST00000558955 SPAG11BQ08648 103 aa7.88□□□□□ -1.15
PKNOX1-208ENST00000558955 ORMDL2Q53FV1 153 aa7.88□□□□□ -1.15
PKNOX1-208ENST00000558955 ZC2HC1BQ5TFG8 222 aa7.88□□□□□ -1.15
PKNOX1-208ENST00000558955 STPG4Q8N801 248 aa7.88□□□□□ -1.15
PKNOX1-208ENST00000558955 TMEM141Q96I45 108 aa7.88□□□□□ -1.15
PKNOX1-208ENST00000558955 CAMK2N2Q96S95 79 aa7.88□□□□□ -1.15
PKNOX1-208ENST00000558955 CYSLTR1Q9Y271 337 aa7.88□□□□□ -1.15
PKNOX1-208ENST00000558955 CARHSP1Q9Y2V2 147 aaKnown RBP7.88□□□□□ -1.15
PKNOX1-208ENST00000558955 LINC00242Q5T6M2 205 aa7.87□□□□□ -1.15
PKNOX1-208ENST00000558955 ORAOV1Q8WV07 137 aa7.87□□□□□ -1.15
PKNOX1-208ENST00000558955 NXT2Q9NPJ8 142 aaKnown RBP7.87□□□□□ -1.15
PKNOX1-208ENST00000558955 RPS10P5Q9NQ39 176 aa7.87□□□□□ -1.15
PKNOX1-208ENST00000558955 KRTAP29-1A8MX34 341 aaPredicted RBP7.86□□□□□ -1.15
PKNOX1-208ENST00000558955 K7EMI3 77 aa7.86□□□□□ -1.15
PKNOX1-208ENST00000558955 RHEBQ15382 184 aa7.86□□□□□ -1.15
PKNOX1-208ENST00000558955 TEX43Q6ZNM6 134 aa7.86□□□□□ -1.15
PKNOX1-208ENST00000558955 LINC00173Q6ZV60 143 aa7.86□□□□□ -1.15
PKNOX1-208ENST00000558955 C2orf48Q96LS8 159 aa7.86□□□□□ -1.15
PKNOX1-208ENST00000558955 GNB1LQ9BYB4 327 aa7.86□□□□□ -1.15
PKNOX1-208ENST00000558955 HERC1Q15751 4861 aa7.86□□□□□ -1.15
PKNOX1-208ENST00000558955 TGIF2-C20orf24A0A0A6YYL0 155 aa7.85□□□□□ -1.15
PKNOX1-208ENST00000558955 A0A0J9YXV3 536 aa7.85□□□□□ -1.15
PKNOX1-208ENST00000558955 IGIPA6NJ69 53 aa7.85□□□□□ -1.15
PKNOX1-208ENST00000558955 UBE2D1P51668 147 aa7.85□□□□□ -1.15
PKNOX1-208ENST00000558955 GAGE2BQ13066 116 aa7.85□□□□□ -1.15
PKNOX1-208ENST00000558955 OR10D4PQ8NGN7 298 aa7.85□□□□□ -1.15
PKNOX1-208ENST00000558955 AMELXQ99217 191 aa7.85□□□□□ -1.15
PKNOX1-208ENST00000558955 LINC00474Q9P2X8 69 aa7.85□□□□□ -1.15
PKNOX1-208ENST00000558955 PKIGQ9Y2B9 76 aa7.85□□□□□ -1.15
PKNOX1-208ENST00000558955 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
PKNOX1-208ENST00000558955 LRP1Q07954 4544 aaKnown RBP7.84□□□□□ -1.15
PKNOX1-208ENST00000558955 LOC107984640A0A0U1RRK4 108 aa7.84□□□□□ -1.15
PKNOX1-208ENST00000558955 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.84□□□□□ -1.15
PKNOX1-208ENST00000558955 PTTG1IPP53801 180 aa7.84□□□□□ -1.15
PKNOX1-208ENST00000558955 Q6ZN92 141 aa7.84□□□□□ -1.15
PKNOX1-208ENST00000558955 C7orf33Q8WU49 177 aa7.84□□□□□ -1.15
PKNOX1-208ENST00000558955 C2orf88Q9BSF0 95 aa7.84□□□□□ -1.15
PKNOX1-208ENST00000558955 ALKBH7Q9BT30 221 aaPredicted RBP7.84□□□□□ -1.15
PKNOX1-208ENST00000558955 VCX2Q9H322 139 aa7.84□□□□□ -1.15
PKNOX1-208ENST00000558955 PKHD1L1Q86WI1 4243 aa7.84□□□□□ -1.15
PKNOX1-208ENST00000558955 A0A087WZ39 114 aa7.83□□□□□ -1.16
PKNOX1-208ENST00000558955 C10orf25Q5T742 122 aa7.83□□□□□ -1.16
PKNOX1-208ENST00000558955 TOMM6Q96B49 74 aa7.83□□□□□ -1.16
PKNOX1-208ENST00000558955 MRPL18Q9H0U6 180 aaKnown RBP7.83□□□□□ -1.16
PKNOX1-208ENST00000558955 RPL18AQ02543 176 aaKnown RBP7.82□□□□□ -1.16
PKNOX1-208ENST00000558955 FABP9Q0Z7S8 132 aa7.82□□□□□ -1.16
PKNOX1-208ENST00000558955 COX19Q49B96 90 aa7.82□□□□□ -1.16
PKNOX1-208ENST00000558955 UNQ6190/PRO20217Q6UXQ8 127 aa7.82□□□□□ -1.16
PKNOX1-208ENST00000558955 A0A1W2PNN7 141 aa7.81□□□□□ -1.16
PKNOX1-208ENST00000558955 NDUFA1O15239 70 aa7.81□□□□□ -1.16
PKNOX1-208ENST00000558955 APOC3P02656 99 aa7.81□□□□□ -1.16
PKNOX1-208ENST00000558955 NPSP0C0P6 89 aa7.81□□□□□ -1.16
PKNOX1-208ENST00000558955 G0S2P27469 103 aa7.81□□□□□ -1.16
PKNOX1-208ENST00000558955 KIAA0087Q14695 138 aa7.81□□□□□ -1.16
PKNOX1-208ENST00000558955 RNF151Q2KHN1 245 aa7.81□□□□□ -1.16
PKNOX1-208ENST00000558955 MRPL35Q9NZE8 188 aaKnown RBP7.81□□□□□ -1.16
PKNOX1-208ENST00000558955 FAT3Q8TDW7 4589 aa7.81□□□□□ -1.16
PKNOX1-208ENST00000558955 LINC01546A6NGU7 62 aa7.8□□□□□ -1.16
PKNOX1-208ENST00000558955 F8WDY8 70 aa7.8□□□□□ -1.16
PKNOX1-208ENST00000558955 OXTP01178 125 aa7.8□□□□□ -1.16
PKNOX1-208ENST00000558955 MT-ND6P03923 174 aa7.8□□□□□ -1.16
PKNOX1-208ENST00000558955 SCGB3A1Q96QR1 104 aa7.8□□□□□ -1.16
PKNOX1-208ENST00000558955 TIMM17AQ99595 171 aa7.8□□□□□ -1.16
PKNOX1-208ENST00000558955 C6orf48Q9UBA6 75 aa7.8□□□□□ -1.16
PKNOX1-208ENST00000558955 PRR3P79522 188 aaKnown RBP7.79□□□□□ -1.16
PKNOX1-208ENST00000558955 C2orf82Q6UX34 121 aa7.79□□□□□ -1.16
PKNOX1-208ENST00000558955 ERASQ7Z444 233 aa7.79□□□□□ -1.16
PKNOX1-208ENST00000558955 FAM19A3Q7Z5A8 133 aa7.79□□□□□ -1.16
PKNOX1-208ENST00000558955 C9orf116Q5BN46 136 aaPredicted RBP7.78□□□□□ -1.16
PKNOX1-208ENST00000558955 PAPPA-AS1Q5QFB9 102 aa7.78□□□□□ -1.16
PKNOX1-208ENST00000558955 FA2HQ7L5A8 372 aa7.78□□□□□ -1.16
PKNOX1-208ENST00000558955 LINC01561Q8N1V8 128 aa7.78□□□□□ -1.16
PKNOX1-208ENST00000558955 TRAPPC1Q9Y5R8 145 aa7.78□□□□□ -1.16
PKNOX1-208ENST00000558955 SNAPINO95295 136 aa7.77□□□□□ -1.17
PKNOX1-208ENST00000558955 NDUFA5Q16718 116 aa7.77□□□□□ -1.17
PKNOX1-208ENST00000558955 XP32Q5T750 250 aa7.77□□□□□ -1.17
PKNOX1-208ENST00000558955 Q6ZRP5 223 aa7.77□□□□□ -1.17
PKNOX1-208ENST00000558955 SVBPQ8N300 66 aa7.77□□□□□ -1.17
PKNOX1-208ENST00000558955 SMCO4Q9NRQ5 59 aa7.77□□□□□ -1.17
PKNOX1-208ENST00000558955 CDKN2A-AS1Q9UH64 79 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms