RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 DPM2O94777 84 aa10.65□□□□□ -0.7
CDC42BPB-203ENST00000558867 IGLC3P0DOY3 106 aa10.65□□□□□ -0.7
CDC42BPB-203ENST00000558867 PAPPA-AS1Q5QFB9 102 aa10.65□□□□□ -0.7
CDC42BPB-203ENST00000558867 MIEN1Q9BRT3 115 aa10.65□□□□□ -0.7
CDC42BPB-203ENST00000558867 CHCHD7Q9BUK0 85 aa10.65□□□□□ -0.7
CDC42BPB-203ENST00000558867 TIMM21Q9BVV7 248 aa10.65□□□□□ -0.7
CDC42BPB-203ENST00000558867 SPANXA1Q9NS26 97 aa10.65□□□□□ -0.7
CDC42BPB-203ENST00000558867 IGKCP01834 107 aa10.64□□□□□ -0.71
CDC42BPB-203ENST00000558867 RPL39P62891 51 aaKnown RBP10.64□□□□□ -0.71
CDC42BPB-203ENST00000558867 TMEM97Q5BJF2 176 aa10.64□□□□□ -0.71
CDC42BPB-203ENST00000558867 OXTP01178 125 aa10.63□□□□□ -0.71
CDC42BPB-203ENST00000558867 SMAGPQ0VAQ4 97 aa10.63□□□□□ -0.71
CDC42BPB-203ENST00000558867 PMVKQ15126 192 aa10.63□□□□□ -0.71
CDC42BPB-203ENST00000558867 MAJINQ3KP22 176 aa10.63□□□□□ -0.71
CDC42BPB-203ENST00000558867 PMCHL2Q9BQD1 86 aa10.63□□□□□ -0.71
CDC42BPB-203ENST00000558867 MRPL35Q9NZE8 188 aaKnown RBP10.63□□□□□ -0.71
CDC42BPB-203ENST00000558867 UQCR10Q9UDW1 63 aa10.63□□□□□ -0.71
CDC42BPB-203ENST00000558867 DNAH8Q96JB1 4490 aa10.62□□□□□ -0.71
CDC42BPB-203ENST00000558867 LOC100131303A0A0U1RQF7 123 aa10.62□□□□□ -0.71
CDC42BPB-203ENST00000558867 LINC00587B1AMM8 73 aa10.62□□□□□ -0.71
CDC42BPB-203ENST00000558867 IGHV3-30P01768 117 aa10.62□□□□□ -0.71
CDC42BPB-203ENST00000558867 IGHV3-33P01772 117 aa10.62□□□□□ -0.71
CDC42BPB-203ENST00000558867 IGHV3-30-3P0DP02 117 aa10.62□□□□□ -0.71
CDC42BPB-203ENST00000558867 IGHV3-30-5P0DP03 117 aa10.62□□□□□ -0.71
CDC42BPB-203ENST00000558867 LELP1Q5T871 98 aa10.62□□□□□ -0.71
CDC42BPB-203ENST00000558867 Q6ZSA8 131 aa10.62□□□□□ -0.71
CDC42BPB-203ENST00000558867 MRPL52Q86TS9 123 aaKnown RBP10.62□□□□□ -0.71
CDC42BPB-203ENST00000558867 CHTOPQ9Y3Y2 248 aaKnown RBP10.62□□□□□ -0.71
CDC42BPB-203ENST00000558867 CSDC2Q9Y534 153 aaKnown RBP10.62□□□□□ -0.71
CDC42BPB-203ENST00000558867 TRAV8-3A0A0A6YYJ7 113 aa10.61□□□□□ -0.71
CDC42BPB-203ENST00000558867 hDV102S1A0JD36 115 aa10.61□□□□□ -0.71
CDC42BPB-203ENST00000558867 H7C423 109 aa10.61□□□□□ -0.71
CDC42BPB-203ENST00000558867 MRPS36P82909 103 aaKnown RBP10.61□□□□□ -0.71
CDC42BPB-203ENST00000558867 CST9LQ9H4G1 147 aa10.61□□□□□ -0.71
CDC42BPB-203ENST00000558867 PLA2G2DQ9UNK4 145 aa10.61□□□□□ -0.71
CDC42BPB-203ENST00000558867 COX11Q9Y6N1 276 aa10.61□□□□□ -0.71
CDC42BPB-203ENST00000558867 IGLV4-3A0A075B6K6 122 aa10.6□□□□□ -0.71
CDC42BPB-203ENST00000558867 GAGE12JA6NER3 117 aa10.6□□□□□ -0.71
CDC42BPB-203ENST00000558867 GAGE1Q13065 139 aa10.6□□□□□ -0.71
CDC42BPB-203ENST00000558867 GAGE4Q13068 117 aa10.6□□□□□ -0.71
CDC42BPB-203ENST00000558867 GAGE5Q13069 117 aa10.6□□□□□ -0.71
CDC42BPB-203ENST00000558867 GAGE13Q4V321 117 aa10.6□□□□□ -0.71
CDC42BPB-203ENST00000558867 AMELXQ99217 191 aa10.6□□□□□ -0.71
CDC42BPB-203ENST00000558867 UBE2D4Q9Y2X8 147 aa10.6□□□□□ -0.71
CDC42BPB-203ENST00000558867 UBR4Q5T4S7 5183 aa10.59□□□□□ -0.71
CDC42BPB-203ENST00000558867 NTM-AS1Q6ZSK4 140 aa10.59□□□□□ -0.71
CDC42BPB-203ENST00000558867 DLEU1O43261 78 aa10.58□□□□□ -0.72
CDC42BPB-203ENST00000558867 COX8AP10176 69 aa10.58□□□□□ -0.72
CDC42BPB-203ENST00000558867 FAM104AQ969W3 186 aa10.58□□□□□ -0.72
CDC42BPB-203ENST00000558867 HMCN2Q8NDA2 5059 aa10.58□□□□□ -0.72
CDC42BPB-203ENST00000558867 IGLV4-69A0A075B6H9 119 aa10.57□□□□□ -0.72
CDC42BPB-203ENST00000558867 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.57□□□□□ -0.72
CDC42BPB-203ENST00000558867 ANKRD39Q53RE8 183 aa10.57□□□□□ -0.72
CDC42BPB-203ENST00000558867 SLC25A34Q6PIV7 304 aa10.57□□□□□ -0.72
CDC42BPB-203ENST00000558867 ATP6V0E2Q8NHE4 81 aa10.57□□□□□ -0.72
CDC42BPB-203ENST00000558867 RMI2Q96E14 147 aa10.57□□□□□ -0.72
CDC42BPB-203ENST00000558867 ZC2HC1BQ5TFG8 222 aa10.56□□□□□ -0.72
CDC42BPB-203ENST00000558867 SCXQ7RTU7 201 aa10.56□□□□□ -0.72
CDC42BPB-203ENST00000558867 VCX2Q9H322 139 aa10.56□□□□□ -0.72
CDC42BPB-203ENST00000558867 TRBV25-1A0A075B6N4 114 aa10.55□□□□□ -0.72
CDC42BPB-203ENST00000558867 C11orf86A6NJI1 115 aa10.55□□□□□ -0.72
CDC42BPB-203ENST00000558867 ZNF25P17030 456 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPB-203ENST00000558867 STPG4Q8N801 248 aa10.55□□□□□ -0.72
CDC42BPB-203ENST00000558867 C14orf144Q96I85 54 aa10.55□□□□□ -0.72
CDC42BPB-203ENST00000558867 TMEM243Q9BU79 118 aa10.55□□□□□ -0.72
CDC42BPB-203ENST00000558867 CHAC1Q9BUX1 264 aa10.55□□□□□ -0.72
CDC42BPB-203ENST00000558867 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPB-203ENST00000558867 TRBV6-8A0A0A6YYG3 113 aa10.54□□□□□ -0.72
CDC42BPB-203ENST00000558867 IGKV2-29A2NJV5 120 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPB-203ENST00000558867 LECT2O14960 151 aa10.54□□□□□ -0.72
CDC42BPB-203ENST00000558867 FAM19A3Q7Z5A8 133 aa10.54□□□□□ -0.72
CDC42BPB-203ENST00000558867 BOD1L2Q8IYS8 172 aa10.54□□□□□ -0.72
CDC42BPB-203ENST00000558867 FGF6P10767 208 aa10.53□□□□□ -0.72
CDC42BPB-203ENST00000558867 WFDC2Q14508 124 aa10.53□□□□□ -0.72
CDC42BPB-203ENST00000558867 E9PLD3 99 aa10.52□□□□□ -0.73
CDC42BPB-203ENST00000558867 HNRNPA3P51991 378 aaKnown RBP10.52□□□□□ -0.73
CDC42BPB-203ENST00000558867 OPRPNQ99935 248 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPB-203ENST00000558867 C2orf88Q9BSF0 95 aa10.52□□□□□ -0.73
CDC42BPB-203ENST00000558867 LBHQ53QV2 105 aaPredicted RBP10.51□□□□□ -0.73
CDC42BPB-203ENST00000558867 DGAT2L7PQ6IED9 249 aa10.51□□□□□ -0.73
CDC42BPB-203ENST00000558867 Q6ZUT4 128 aa10.51□□□□□ -0.73
CDC42BPB-203ENST00000558867 TINCRA0A1B0GVN0 87 aa10.5□□□□□ -0.73
CDC42BPB-203ENST00000558867 UBE2L6O14933 153 aa10.5□□□□□ -0.73
CDC42BPB-203ENST00000558867 HERVK_113P61574 105 aa10.5□□□□□ -0.73
CDC42BPB-203ENST00000558867 LRP1Q07954 4544 aaKnown RBP10.5□□□□□ -0.73
CDC42BPB-203ENST00000558867 LINC01620Q4KN68 170 aa10.49□□□□□ -0.73
CDC42BPB-203ENST00000558867 CIRBP-AS1Q8TBR5 109 aa10.49□□□□□ -0.73
CDC42BPB-203ENST00000558867 CDC42SE2Q9NRR3 84 aa10.49□□□□□ -0.73
CDC42BPB-203ENST00000558867 IGKV2D-24A0A075B6R9 120 aa10.48□□□□□ -0.73
CDC42BPB-203ENST00000558867 IGKV2D-26A0A0A0MRZ7 120 aa10.48□□□□□ -0.73
CDC42BPB-203ENST00000558867 UBE2D1P51668 147 aa10.48□□□□□ -0.73
CDC42BPB-203ENST00000558867 SEC11AP67812 179 aa10.48□□□□□ -0.73
CDC42BPB-203ENST00000558867 C14orf177Q52M58 125 aa10.48□□□□□ -0.73
CDC42BPB-203ENST00000558867 OR5A1Q8NGJ0 315 aa10.48□□□□□ -0.73
CDC42BPB-203ENST00000558867 TMEM101Q96IK0 257 aa10.48□□□□□ -0.73
CDC42BPB-203ENST00000558867 HIGD1BQ9P298 99 aa10.48□□□□□ -0.73
CDC42BPB-203ENST00000558867 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
CDC42BPB-203ENST00000558867 A0A1B0GUV1 79 aa10.47□□□□□ -0.73
CDC42BPB-203ENST00000558867 M0R143 59 aa10.47□□□□□ -0.73
CDC42BPB-203ENST00000558867 ZNF22P17026 224 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms