RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 KIAA1644Q3SXP7 199 aa9.83□□□□□ -0.84
CSHL1-208ENST00000558609 PRSS3P2Q8NHM4 247 aa9.83□□□□□ -0.84
CSHL1-208ENST00000558609 SMIM2Q9BVW6 85 aa9.83□□□□□ -0.84
CSHL1-208ENST00000558609 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
CSHL1-208ENST00000558609 NPYP01303 97 aa9.82□□□□□ -0.84
CSHL1-208ENST00000558609 NDUFA6P56556 154 aa9.82□□□□□ -0.84
CSHL1-208ENST00000558609 OXTP01178 125 aa9.81□□□□□ -0.84
CSHL1-208ENST00000558609 RNASE13Q5GAN3 156 aaKnown RBP9.81□□□□□ -0.84
CSHL1-208ENST00000558609 Q6ZUT4 128 aa9.81□□□□□ -0.84
CSHL1-208ENST00000558609 ORMDL3Q8N138 153 aa9.81□□□□□ -0.84
CSHL1-208ENST00000558609 LINC00526Q96FQ7 95 aa9.81□□□□□ -0.84
CSHL1-208ENST00000558609 TRAV13-1A0A0B4J241 112 aa9.8□□□□□ -0.84
CSHL1-208ENST00000558609 ZNF561-AS1K7EIQ3 104 aa9.8□□□□□ -0.84
CSHL1-208ENST00000558609 COX7A2LO14548 114 aa9.8□□□□□ -0.84
CSHL1-208ENST00000558609 RPL39P62891 51 aaKnown RBP9.8□□□□□ -0.84
CSHL1-208ENST00000558609 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
CSHL1-208ENST00000558609 PKIGQ9Y2B9 76 aa9.8□□□□□ -0.84
CSHL1-208ENST00000558609 FAT3Q8TDW7 4589 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 HIST1H2BKO60814 126 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 HIST1H2BJP06899 126 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 MALP21145 153 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 HIST1H2BOP23527 126 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 HIST1H2BBP33778 126 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 HNRNPA3P51991 378 aaKnown RBP9.79□□□□□ -0.84
CSHL1-208ENST00000558609 HIST1H2BDP58876 126 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 HIST1H2BCP62807 126 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 SYCNQ0VAF6 134 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 HIST2H2BEQ16778 126 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 MAJINQ3KP22 176 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.79□□□□□ -0.84
CSHL1-208ENST00000558609 HIST1H2BHQ93079 126 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 CARD19Q96LW7 228 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 HIST1H2BNQ99877 126 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 HIST1H2BMQ99879 126 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 SPANXA1Q9NS26 97 aa9.79□□□□□ -0.84
CSHL1-208ENST00000558609 PKHD1L1Q86WI1 4243 aa9.78□□□□□ -0.84
CSHL1-208ENST00000558609 A0A096LNI7 61 aa9.78□□□□□ -0.84
CSHL1-208ENST00000558609 IGKV2-24A0A0C4DH68 120 aa9.78□□□□□ -0.84
CSHL1-208ENST00000558609 PRSS47A8MTI9 375 aa9.78□□□□□ -0.84
CSHL1-208ENST00000558609 MRPS36P82909 103 aaKnown RBP9.78□□□□□ -0.84
CSHL1-208ENST00000558609 BAGE3Q86Y29 109 aa9.78□□□□□ -0.84
CSHL1-208ENST00000558609 PRELID3AQ96N28 172 aa9.78□□□□□ -0.84
CSHL1-208ENST00000558609 LINC00474Q9P2X8 69 aa9.78□□□□□ -0.84
CSHL1-208ENST00000558609 LAMTOR2Q9Y2Q5 125 aa9.77□□□□□ -0.85
CSHL1-208ENST00000558609 IGLV4-69A0A075B6H9 119 aa9.76□□□□□ -0.85
CSHL1-208ENST00000558609 C5orf38Q86SI9 138 aa9.76□□□□□ -0.85
CSHL1-208ENST00000558609 STPG4Q8N801 248 aa9.76□□□□□ -0.85
CSHL1-208ENST00000558609 C7orf33Q8WU49 177 aa9.76□□□□□ -0.85
CSHL1-208ENST00000558609 APOMO95445 188 aa9.75□□□□□ -0.85
CSHL1-208ENST00000558609 C2orf48Q96LS8 159 aa9.75□□□□□ -0.85
CSHL1-208ENST00000558609 OPRPNQ99935 248 aaPredicted RBP9.75□□□□□ -0.85
CSHL1-208ENST00000558609 ALKBH7Q9BT30 221 aaPredicted RBP9.75□□□□□ -0.85
CSHL1-208ENST00000558609 SNRPEP62304 92 aaKnown RBP9.74□□□□□ -0.85
CSHL1-208ENST00000558609 Q6ZRU5 148 aa9.74□□□□□ -0.85
CSHL1-208ENST00000558609 PYGO1Q9Y3Y4 419 aa9.74□□□□□ -0.85
CSHL1-208ENST00000558609 IGHV3OR16-9A0A0B4J2B5 98 aa9.73□□□□□ -0.85
CSHL1-208ENST00000558609 S100A2P29034 98 aa9.73□□□□□ -0.85
CSHL1-208ENST00000558609 SERTAD4-AS1Q5TG53 156 aa9.73□□□□□ -0.85
CSHL1-208ENST00000558609 CAMK2N2Q96S95 79 aa9.73□□□□□ -0.85
CSHL1-208ENST00000558609 LOC107984640A0A0U1RRK4 108 aa9.72□□□□□ -0.85
CSHL1-208ENST00000558609 IFI27P40305 119 aaPredicted RBP9.72□□□□□ -0.85
CSHL1-208ENST00000558609 PTTG1IPP53801 180 aa9.72□□□□□ -0.85
CSHL1-208ENST00000558609 OR10D4PQ8NGN7 298 aa9.72□□□□□ -0.85
CSHL1-208ENST00000558609 MAP1LC3AQ9H492 121 aa9.72□□□□□ -0.85
CSHL1-208ENST00000558609 LOC389332A0A1B0GUA5 103 aa9.71□□□□□ -0.86
CSHL1-208ENST00000558609 IFITM10A6NMD0 228 aa9.71□□□□□ -0.86
CSHL1-208ENST00000558609 SPAG11BQ08648 103 aa9.71□□□□□ -0.86
CSHL1-208ENST00000558609 Q8N8P6 123 aa9.71□□□□□ -0.86
CSHL1-208ENST00000558609 C18orf32Q8TCD1 76 aa9.71□□□□□ -0.86
CSHL1-208ENST00000558609 C5orf52A6NGY3 159 aa9.7□□□□□ -0.86
CSHL1-208ENST00000558609 RNF151Q2KHN1 245 aa9.7□□□□□ -0.86
CSHL1-208ENST00000558609 IGLV4-3A0A075B6K6 122 aa9.69□□□□□ -0.86
CSHL1-208ENST00000558609 F8WDY8 70 aa9.69□□□□□ -0.86
CSHL1-208ENST00000558609 GAGE2BQ13066 116 aa9.69□□□□□ -0.86
CSHL1-208ENST00000558609 PDZD11Q5EBL8 140 aa9.69□□□□□ -0.86
CSHL1-208ENST00000558609 FA2HQ7L5A8 372 aa9.69□□□□□ -0.86
CSHL1-208ENST00000558609 TMEM141Q96I45 108 aa9.69□□□□□ -0.86
CSHL1-208ENST00000558609 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.68□□□□□ -0.86
CSHL1-208ENST00000558609 K7EMI3 77 aa9.68□□□□□ -0.86
CSHL1-208ENST00000558609 HSBP1O75506 76 aa9.68□□□□□ -0.86
CSHL1-208ENST00000558609 SERF1AO75920 110 aa9.68□□□□□ -0.86
CSHL1-208ENST00000558609 LINC00614P0C842 121 aa9.68□□□□□ -0.86
CSHL1-208ENST00000558609 PRR3P79522 188 aaKnown RBP9.68□□□□□ -0.86
CSHL1-208ENST00000558609 ORAOV1Q8WV07 137 aa9.68□□□□□ -0.86
CSHL1-208ENST00000558609 ORMDL2Q53FV1 153 aa9.67□□□□□ -0.86
CSHL1-208ENST00000558609 COA6Q5JTJ3 125 aaKnown RBP9.67□□□□□ -0.86
CSHL1-208ENST00000558609 LINC00242Q5T6M2 205 aa9.67□□□□□ -0.86
CSHL1-208ENST00000558609 C2orf66Q6UXQ4 117 aa9.67□□□□□ -0.86
CSHL1-208ENST00000558609 NXT2Q9NPJ8 142 aaKnown RBP9.67□□□□□ -0.86
CSHL1-208ENST00000558609 MRPL35Q9NZE8 188 aaKnown RBP9.67□□□□□ -0.86
CSHL1-208ENST00000558609 CYSLTR1Q9Y271 337 aa9.67□□□□□ -0.86
CSHL1-208ENST00000558609 A0A087WZ39 114 aa9.66□□□□□ -0.86
CSHL1-208ENST00000558609 NPSP0C0P6 89 aa9.66□□□□□ -0.86
CSHL1-208ENST00000558609 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
CSHL1-208ENST00000558609 CHCHD1Q96BP2 118 aaKnown RBP9.66□□□□□ -0.86
CSHL1-208ENST00000558609 PLA2G2DQ9UNK4 145 aa9.66□□□□□ -0.86
CSHL1-208ENST00000558609 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
CSHL1-208ENST00000558609 NDUFA1O15239 70 aa9.65□□□□□ -0.86
CSHL1-208ENST00000558609 UBE2D1P51668 147 aa9.65□□□□□ -0.86
CSHL1-208ENST00000558609 AKR1D1P51857 326 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms