RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 HSPE1-MOB4S4R3N1 261 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 SORL1Q92673 2214 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 HERC1Q15751 4861 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 HECTD4Q9Y4D8 3996 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 HUWE1Q7Z6Z7 4374 aaKnown RBP2.49□□□□□ -2.01
LRRC28-205ENST00000558248 M0R129 80 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 ZNF737O75373 536 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 SS18Q15532 418 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 ATP11AUNQ6ZP68 121 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 Q6ZUT4 128 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 C5orf17Q8NAS9 161 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 OR4X2Q8NGF9 303 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 LINC00526Q96FQ7 95 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 HYLS1Q96M11 299 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 NABP2Q9BQ15 211 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 SCRT1Q9BWW7 348 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 SERP1Q9Y6X1 66 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 MINOS1-NBL1R4GNA1 71 aa2.49□□□□□ -2.01
LRRC28-205ENST00000558248 KIAA2026Q5HYC2 2103 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 TCRBV3S1A0A5B6 114 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 ZNF705FA8MVS1 300 aaPredicted RBP2.48□□□□□ -2.01
LRRC28-205ENST00000558248 MPC2O95563 127 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 ZNF22P17026 224 aaPredicted RBP2.48□□□□□ -2.01
LRRC28-205ENST00000558248 FAM27BQ5VT28 67 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 HCP5Q6MZN7 132 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 Q6P435 159 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 FOXI2Q6ZQN5 318 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 Q8IYB0 196 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 LINC00471Q8N535 108 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 OR2T35Q8NGX2 323 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 OR5AK2Q8NH90 309 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 CLEC2BQ92478 149 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 RETNLBQ9BQ08 111 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 HIGD2AQ9BW72 106 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 PRO0461Q9UI25 63 aa2.48□□□□□ -2.01
LRRC28-205ENST00000558248 NOP16Q9Y3C1 178 aaKnown RBP2.48□□□□□ -2.01
LRRC28-205ENST00000558248 PLECQ15149 4684 aaKnown RBP2.47□□□□□ -2.01
LRRC28-205ENST00000558248 C3orf85A0A1B0GTC6 90 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 MCRIP1C9JLW8 97 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 PITX3O75364 302 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 BAALC-AS2P0C853 105 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 ZNF846Q147U1 533 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 KRTAP25-1Q3LHN0 102 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 SPANXN5Q5MJ07 72 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 ZCCHC23Q6ZST2 131 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 C9orf62Q8N4C0 152 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 OTOSQ8NHW6 89 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 Q96M85 177 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 AQP10Q96PS8 301 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 SLC50A1Q9BRV3 221 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 C14orf132Q9NPU4 83 aa2.47□□□□□ -2.01
LRRC28-205ENST00000558248 DMBT1Q9UGM3 2413 aaPredicted RBP2.46□□□□□ -2.02
LRRC28-205ENST00000558248 IGHV1-24A0A0C4DH33 117 aa2.46□□□□□ -2.02
LRRC28-205ENST00000558248 hDV103S1A0JD37 113 aa2.46□□□□□ -2.02
LRRC28-205ENST00000558248 PSCAO43653 123 aa2.46□□□□□ -2.02
LRRC28-205ENST00000558248 GYPAP02724 150 aa2.46□□□□□ -2.02
LRRC28-205ENST00000558248 LINC00032P0C843 101 aa2.46□□□□□ -2.02
LRRC28-205ENST00000558248 DEFA4P12838 97 aa2.46□□□□□ -2.02
LRRC28-205ENST00000558248 C9orf153Q5TBE3 101 aa2.46□□□□□ -2.02
LRRC28-205ENST00000558248 OR2T2Q6IF00 324 aa2.46□□□□□ -2.02
LRRC28-205ENST00000558248 ATP6V0E2Q8NHE4 81 aa2.46□□□□□ -2.02
LRRC28-205ENST00000558248 DPY30Q9C005 99 aa2.46□□□□□ -2.02
LRRC28-205ENST00000558248 CST11Q9H112 138 aa2.46□□□□□ -2.02
LRRC28-205ENST00000558248 TMEM262E9PQX1 116 aa2.45□□□□□ -2.02
LRRC28-205ENST00000558248 H3BQF6 201 aa2.45□□□□□ -2.02
LRRC28-205ENST00000558248 ROMO1P60602 79 aa2.45□□□□□ -2.02
LRRC28-205ENST00000558248 DEFB136Q30KP8 78 aa2.45□□□□□ -2.02
LRRC28-205ENST00000558248 LCE3AQ5TA76 89 aa2.45□□□□□ -2.02
LRRC28-205ENST00000558248 MIC13Q5XKP0 118 aa2.45□□□□□ -2.02
LRRC28-205ENST00000558248 Q8N814 137 aa2.45□□□□□ -2.02
LRRC28-205ENST00000558248 ANAPC11Q9NYG5 84 aa2.45□□□□□ -2.02
LRRC28-205ENST00000558248 KAAG1Q9UBP8 84 aa2.45□□□□□ -2.02
LRRC28-205ENST00000558248 KMT2AQ03164 3969 aa2.45□□□□□ -2.02
LRRC28-205ENST00000558248 TNCP24821 2201 aa2.45□□□□□ -2.02
LRRC28-205ENST00000558248 ALMS1Q8TCU4 4167 aa2.45□□□□□ -2.02
LRRC28-205ENST00000558248 A0A0J9YX75 114 aa2.44□□□□□ -2.02
LRRC28-205ENST00000558248 FAM24AA6NFZ4 105 aa2.44□□□□□ -2.02
LRRC28-205ENST00000558248 H3BSH0 61 aa2.44□□□□□ -2.02
LRRC28-205ENST00000558248 M0R1W7 72 aa2.44□□□□□ -2.02
LRRC28-205ENST00000558248 MGST1P10620 155 aaKnown RBP2.44□□□□□ -2.02
LRRC28-205ENST00000558248 RPL38P63173 70 aaKnown RBP2.44□□□□□ -2.02
LRRC28-205ENST00000558248 NDPQ00604 133 aa2.44□□□□□ -2.02
LRRC28-205ENST00000558248 ZNF345Q14585 488 aa2.44□□□□□ -2.02
LRRC28-205ENST00000558248 Q6AWC8 147 aa2.44□□□□□ -2.02
LRRC28-205ENST00000558248 ZNF826PQ6ZT77 177 aa2.44□□□□□ -2.02
LRRC28-205ENST00000558248 SMIM7Q9BQ49 75 aa2.44□□□□□ -2.02
LRRC28-205ENST00000558248 AP4S1Q9Y587 144 aa2.44□□□□□ -2.02
LRRC28-205ENST00000558248 DNAH10Q8IVF4 4471 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 IGKV1D-42A0A075B6H8 117 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 IGLV10-54A0A075B6I4 117 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 A0A0G2JND7 137 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 A6NN06 94 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 E7EUB6 86 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 NDUFB6O95139 128 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 IGLV1-51P01701 117 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 GNGT1P63211 74 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 EIF4EBP1Q13541 118 aaPredicted RBP2.43□□□□□ -2.02
LRRC28-205ENST00000558248 LINC00483Q53H64 154 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 C1orf134Q5TEV5 83 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms