RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 FAM74A3Q4VXF1 159 aa9.68□□□□□ -0.86
SCFD1-224ENST00000557713 KRTAP11-1Q8IUC1 163 aa9.68□□□□□ -0.86
SCFD1-224ENST00000557713 PRR26Q8N8Z3 221 aa9.68□□□□□ -0.86
SCFD1-224ENST00000557713 ORAOV1Q8WV07 137 aa9.68□□□□□ -0.86
SCFD1-224ENST00000557713 IMMP2LQ96T52 175 aa9.68□□□□□ -0.86
SCFD1-224ENST00000557713 FAM168BA1KXE4 195 aa9.67□□□□□ -0.86
SCFD1-224ENST00000557713 TLX1NBP0CAT3 122 aa9.67□□□□□ -0.86
SCFD1-224ENST00000557713 RPL23P62829 140 aaKnown RBP9.67□□□□□ -0.86
SCFD1-224ENST00000557713 C10orf25Q5T742 122 aa9.67□□□□□ -0.86
SCFD1-224ENST00000557713 AKAP14Q86UN6 197 aa9.67□□□□□ -0.86
SCFD1-224ENST00000557713 DIRC1Q969H9 104 aa9.67□□□□□ -0.86
SCFD1-224ENST00000557713 SMIM27A0A1W2PRY6 76 aa9.66□□□□□ -0.86
SCFD1-224ENST00000557713 TCAPO15273 167 aa9.66□□□□□ -0.86
SCFD1-224ENST00000557713 TNFRSF6BO95407 300 aa9.66□□□□□ -0.86
SCFD1-224ENST00000557713 CKS2P33552 79 aa9.66□□□□□ -0.86
SCFD1-224ENST00000557713 MRPS36P82909 103 aaKnown RBP9.66□□□□□ -0.86
SCFD1-224ENST00000557713 SPANXA1Q9NS26 97 aa9.66□□□□□ -0.86
SCFD1-224ENST00000557713 A0A087WZ39 114 aa9.65□□□□□ -0.86
SCFD1-224ENST00000557713 H0Y9J4 135 aa9.65□□□□□ -0.86
SCFD1-224ENST00000557713 NDUFA1O15239 70 aa9.65□□□□□ -0.86
SCFD1-224ENST00000557713 UNQ6190/PRO20217Q6UXQ8 127 aa9.65□□□□□ -0.86
SCFD1-224ENST00000557713 A0A1B0GW15 77 aa9.64□□□□□ -0.87
SCFD1-224ENST00000557713 KRTAP7-1Q8IUC3 87 aa9.64□□□□□ -0.87
SCFD1-224ENST00000557713 SMIM2Q9BVW6 85 aa9.64□□□□□ -0.87
SCFD1-224ENST00000557713 C6orf48Q9UBA6 75 aa9.64□□□□□ -0.87
SCFD1-224ENST00000557713 IFITM10A6NMD0 228 aa9.62□□□□□ -0.87
SCFD1-224ENST00000557713 D6R8Y8 96 aa9.62□□□□□ -0.87
SCFD1-224ENST00000557713 HBBP68871 147 aa9.62□□□□□ -0.87
SCFD1-224ENST00000557713 KIAA0087Q14695 138 aa9.62□□□□□ -0.87
SCFD1-224ENST00000557713 ADIRFQ15847 76 aa9.62□□□□□ -0.87
SCFD1-224ENST00000557713 FAM19A5Q7Z5A7 132 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-224ENST00000557713 NAT8Q9UHE5 227 aa9.62□□□□□ -0.87
SCFD1-224ENST00000557713 C9JQL5 133 aa9.61□□□□□ -0.87
SCFD1-224ENST00000557713 NPYP01303 97 aa9.61□□□□□ -0.87
SCFD1-224ENST00000557713 KRTAP1-4P0C5Y4 121 aa9.61□□□□□ -0.87
SCFD1-224ENST00000557713 GAGE2EQ4V326 116 aa9.61□□□□□ -0.87
SCFD1-224ENST00000557713 SMDT1Q9H4I9 107 aa9.61□□□□□ -0.87
SCFD1-224ENST00000557713 GAGE2DQ9UEU5 116 aa9.61□□□□□ -0.87
SCFD1-224ENST00000557713 IGLV1-50A0A075B6I6 118 aa9.6□□□□□ -0.87
SCFD1-224ENST00000557713 A0A1B0GXF2 115 aa9.59□□□□□ -0.87
SCFD1-224ENST00000557713 hCG_2014768A0A024R1R8 64 aa9.58□□□□□ -0.88
SCFD1-224ENST00000557713 TGIF2-C20orf24A0A0A6YYL0 155 aa9.58□□□□□ -0.88
SCFD1-224ENST00000557713 F8W036 122 aa9.58□□□□□ -0.88
SCFD1-224ENST00000557713 PPBPP02775 128 aa9.58□□□□□ -0.88
SCFD1-224ENST00000557713 S100A8P05109 93 aa9.58□□□□□ -0.88
SCFD1-224ENST00000557713 LINC00242Q5T6M2 205 aa9.58□□□□□ -0.88
SCFD1-224ENST00000557713 MRPL54Q6P161 138 aaKnown RBP9.58□□□□□ -0.88
SCFD1-224ENST00000557713 PYGO1Q9Y3Y4 419 aa9.58□□□□□ -0.88
SCFD1-224ENST00000557713 TRBV30A0A0K0K1B3 111 aa9.57□□□□□ -0.88
SCFD1-224ENST00000557713 M0QXV9 152 aa9.57□□□□□ -0.88
SCFD1-224ENST00000557713 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
SCFD1-224ENST00000557713 IGLV4-3A0A075B6K6 122 aa9.56□□□□□ -0.88
SCFD1-224ENST00000557713 NDUFC2-KCTD14E9PQ53 114 aa9.56□□□□□ -0.88
SCFD1-224ENST00000557713 IFI27P40305 119 aaPredicted RBP9.56□□□□□ -0.88
SCFD1-224ENST00000557713 C9orf129Q5T035 196 aaKnown RBP9.56□□□□□ -0.88
SCFD1-224ENST00000557713 C2orf82Q6UX34 121 aa9.56□□□□□ -0.88
SCFD1-224ENST00000557713 RAB5AP20339 215 aa9.55□□□□□ -0.88
SCFD1-224ENST00000557713 UBE2BP63146 152 aa9.55□□□□□ -0.88
SCFD1-224ENST00000557713 TMEM136Q6ZRR5 245 aa9.54□□□□□ -0.88
SCFD1-224ENST00000557713 ORMDL3Q8N138 153 aa9.54□□□□□ -0.88
SCFD1-224ENST00000557713 LINC01561Q8N1V8 128 aa9.54□□□□□ -0.88
SCFD1-224ENST00000557713 PRSS47A8MTI9 375 aa9.53□□□□□ -0.88
SCFD1-224ENST00000557713 PEA15Q15121 130 aa9.53□□□□□ -0.88
SCFD1-224ENST00000557713 TMEM141Q96I45 108 aa9.53□□□□□ -0.88
SCFD1-224ENST00000557713 PRELID3AQ96N28 172 aa9.53□□□□□ -0.88
SCFD1-224ENST00000557713 MUC2Q02817 5179 aa9.52□□□□□ -0.89
SCFD1-224ENST00000557713 RPL13AP40429 203 aaKnown RBP9.52□□□□□ -0.89
SCFD1-224ENST00000557713 UBE2D1P51668 147 aa9.52□□□□□ -0.89
SCFD1-224ENST00000557713 PACRGQ96M98 296 aaPredicted RBP9.52□□□□□ -0.89
SCFD1-224ENST00000557713 CARHSP1Q9Y2V2 147 aaKnown RBP9.52□□□□□ -0.89
SCFD1-224ENST00000557713 TEX43Q6ZNM6 134 aa9.51□□□□□ -0.89
SCFD1-224ENST00000557713 ATP5L2Q7Z4Y8 100 aa9.51□□□□□ -0.89
SCFD1-224ENST00000557713 ZNF861PO60384 105 aa9.5□□□□□ -0.89
SCFD1-224ENST00000557713 PRR4Q16378 134 aa9.5□□□□□ -0.89
SCFD1-224ENST00000557713 ZC2HC1BQ5TFG8 222 aa9.5□□□□□ -0.89
SCFD1-224ENST00000557713 LOC389332A0A1B0GUA5 103 aa9.49□□□□□ -0.89
SCFD1-224ENST00000557713 LINC00173Q6ZV60 143 aa9.49□□□□□ -0.89
SCFD1-224ENST00000557713 AMELXQ99217 191 aa9.49□□□□□ -0.89
SCFD1-224ENST00000557713 Q6ZN92 141 aa9.48□□□□□ -0.89
SCFD1-224ENST00000557713 FAM19A3Q7Z5A8 133 aa9.48□□□□□ -0.89
SCFD1-224ENST00000557713 LAMTOR2Q9Y2Q5 125 aa9.48□□□□□ -0.89
SCFD1-224ENST00000557713 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
SCFD1-224ENST00000557713 C2orf66Q6UXQ4 117 aa9.47□□□□□ -0.89
SCFD1-224ENST00000557713 Q8N8P6 123 aa9.47□□□□□ -0.89
SCFD1-224ENST00000557713 C2orf88Q9BSF0 95 aa9.47□□□□□ -0.89
SCFD1-224ENST00000557713 CYSLTR1Q9Y271 337 aa9.47□□□□□ -0.89
SCFD1-224ENST00000557713 NUPR1O60356 82 aa9.46□□□□□ -0.9
SCFD1-224ENST00000557713 PRSS2P07478 247 aa9.46□□□□□ -0.9
SCFD1-224ENST00000557713 CKS1BP61024 79 aa9.46□□□□□ -0.9
SCFD1-224ENST00000557713 C6orf226Q5I0X4 101 aa9.46□□□□□ -0.9
SCFD1-224ENST00000557713 Q8IZM0 81 aa9.46□□□□□ -0.9
SCFD1-224ENST00000557713 LINC00469Q8N7U9 141 aa9.46□□□□□ -0.9
SCFD1-224ENST00000557713 VCX2Q9H322 139 aa9.46□□□□□ -0.9
SCFD1-224ENST00000557713 MAP1LC3AQ9H492 121 aa9.46□□□□□ -0.9
SCFD1-224ENST00000557713 TOMM7Q9P0U1 55 aa9.46□□□□□ -0.9
SCFD1-224ENST00000557713 IGIPA6NJ69 53 aa9.45□□□□□ -0.9
SCFD1-224ENST00000557713 NPSP0C0P6 89 aa9.45□□□□□ -0.9
SCFD1-224ENST00000557713 LBHQ53QV2 105 aaPredicted RBP9.45□□□□□ -0.9
SCFD1-224ENST00000557713 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
SCFD1-224ENST00000557713 ALKBH7Q9BT30 221 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms