RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 SKA2Q8WVK7 121 aaPredicted RBP-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 LCN9Q8WX39 176 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 SPTSSAQ969W0 71 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 DPH3Q96FX2 82 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 SAR1AQ9NR31 198 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 NDUFA4L2Q9NRX3 87 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 LINC00474Q9P2X8 69 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 APLNQ9ULZ1 77 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 HSPB11Q9Y547 144 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 LINC01558Q9Y6Z2 57 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 R4GMQ9 66 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 V9GYH0 126 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 DNHD1Q96M86 4753 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 LAMA2P24043 3122 aaKnown RBP-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 GAPVD1Q14C86 1478 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 IFT140Q96RY7 1462 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 TET3O43151 1660 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 PDCD11Q14690 1871 aaKnown RBP-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 PKD1L2Q7Z442 2459 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 ARHGEF12Q9NZN5 1544 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 FAM186AA6NE01 2351 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 DAPK1P53355 1430 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 MGAM2Q2M2H8 2515 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 ZNF518AQ6AHZ1 1483 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 A6NIN4 97 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 F8VRH5 84 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 K7ERU9 68 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 TNFP01375 233 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 NEFHP12036 1026 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 PIPP12273 146 aaPredicted RBP-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 DEFB135Q30KP9 77 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 DEFB112Q30KQ8 113 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 H1FX-AS1Q4G0G2 97 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 C10orf113Q5VZT2 155 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 SMIM15Q7Z3B0 74 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 TAC4Q86UU9 113 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 BAGE2Q86Y30 109 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 TSTD1Q8NFU3 115 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 SMIM4Q8WVI0 70 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 MAGOHBQ96A72 148 aaKnown RBP-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 SPRR4Q96PI1 79 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 PSMG3Q9BT73 122 aaPredicted RBP-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 MRPL40Q9NQ50 206 aaKnown RBP-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 LENEPQ9Y5L5 61 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 V9GYQ6 96 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 CEP152O94986 1710 aa-0.45□□□□□ -2.48
FOXN3-216ENST00000557496 RAPGEF6Q8TEU7 1601 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 FHAD1B1AJZ9 1412 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 PPIP5K1Q6PFW1 1433 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 MYOM1P52179 1685 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 COL4A6Q14031 1691 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 DYNC1H1Q14204 4646 aaKnown RBP-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 RELNP78509 3460 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 UTP20O75691 2785 aaKnown RBP-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 COL14A1Q05707 1796 aaKnown RBP-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 TRBV7-3A0A075B6L6 115 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 CPSF4LA6NMK7 179 aaKnown RBP-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 HMGN4O00479 90 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 UQCR11O14957 56 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 SPINK4O60575 86 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 MT1AP04731 61 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 DBIP07108 87 aaKnown RBP-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 IGLC1P0CG04 106 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 SMIM6P0DI80 62 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 S100A5P33763 92 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 B2MP61769 119 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 RPS25P62851 125 aaKnown RBP-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 MMGT1Q8N4V1 131 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 LAMA3Q16787 3333 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 DNAH7Q8WXX0 4024 aa-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 RIF1Q5UIP0 2472 aaKnown RBP-0.46□□□□□ -2.48
FOXN3-216ENST00000557496 NUP188Q5SRE5 1749 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 POLA1P09884 1462 aaPredicted RBP-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 ADAMTS12P58397 1594 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 ABCA13Q86UQ4 5058 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 TRBV7-4A0A0J9YYF1 115 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 LOC100130705A0A1B0GUX0 176 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 M0R2Z0 102 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 SFT2D2O95562 160 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 NCR2O95944 276 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 S100A3P33764 101 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 COPZ1P61923 177 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 COX17Q14061 63 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 SCIMPQ6UWF3 145 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 KCNRGQ8N5I3 272 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 MYOZ3Q8TDC0 251 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 TMEM263Q8WUH6 116 aaKnown RBP-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 LINC01600Q96MT4 127 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 AQP10Q96PS8 301 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 SELENOSQ9BQE4 189 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 TPT1P8Q9HAU6 139 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 GSKIPQ9P0R6 139 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 QRICH2Q9H0J4 1663 aa-0.47□□□□□ -2.48
FOXN3-216ENST00000557496 ANKRD30AQ9BXX3 1397 aa-0.47□□□□□ -2.49
FOXN3-216ENST00000557496 MYOM3Q5VTT5 1437 aa-0.47□□□□□ -2.49
FOXN3-216ENST00000557496 MTORP42345 2549 aa-0.47□□□□□ -2.49
FOXN3-216ENST00000557496 C1orf167Q5SNV9 1468 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 MAGI1Q96QZ7 1491 aaPredicted RBP-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 SLIT1O75093 1534 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 PTPN23Q9H3S7 1636 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms