RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-223	ENST00000557294		Q6ZUT4	128 aa		10.66	□□□□□ -0.7
PRKCH-223	ENST00000557294	OCC1	Q8TAD7	63 aa		10.66	□□□□□ -0.7
PRKCH-223	ENST00000557294	NDUFC2-KCTD14	E9PQ53	114 aa		10.65	□□□□□ -0.7
PRKCH-223	ENST00000557294		K7EN84	100 aa		10.65	□□□□□ -0.7
PRKCH-223	ENST00000557294	CTDSP1	Q9GZU7	261 aa		10.65	□□□□□ -0.7
PRKCH-223	ENST00000557294	RAB4A	P20338	218 aa		10.64	□□□□□ -0.71
PRKCH-223	ENST00000557294	KIAA0087	Q14695	138 aa		10.64	□□□□□ -0.71
PRKCH-223	ENST00000557294	TMEM191A	Q9H0A3	160 aa		10.64	□□□□□ -0.71
PRKCH-223	ENST00000557294	TRBV30	A0A0K0K1B3	111 aa		10.63	□□□□□ -0.71
PRKCH-223	ENST00000557294	LINC00173	Q6ZV60	143 aa		10.63	□□□□□ -0.71
PRKCH-223	ENST00000557294	TMEM18	Q96B42	140 aa		10.63	□□□□□ -0.71
PRKCH-223	ENST00000557294	KIR2DL4	Q99706	377 aa		10.63	□□□□□ -0.71
PRKCH-223	ENST00000557294		A8MWL6	223 aa		10.62	□□□□□ -0.71
PRKCH-223	ENST00000557294	TEX46	H3BTG2	121 aa		10.62	□□□□□ -0.71
PRKCH-223	ENST00000557294	RPL28	P46779	137 aa	Known RBP	10.62	□□□□□ -0.71
PRKCH-223	ENST00000557294	C22orf24	Q9Y442	160 aa		10.62	□□□□□ -0.71
PRKCH-223	ENST00000557294	KRTAP13-2	Q52LG2	175 aa		10.61	□□□□□ -0.71
PRKCH-223	ENST00000557294	LBH	Q53QV2	105 aa	Predicted RBP	10.61	□□□□□ -0.71
PRKCH-223	ENST00000557294	FAM104A	Q969W3	186 aa		10.61	□□□□□ -0.71
PRKCH-223	ENST00000557294	ANAPC11	Q9NYG5	84 aa		10.61	□□□□□ -0.71
PRKCH-223	ENST00000557294	GATC	O43716	136 aa	Known RBP	10.6	□□□□□ -0.71
PRKCH-223	ENST00000557294	SUMO2	P61956	95 aa	Known RBP	10.6	□□□□□ -0.71
PRKCH-223	ENST00000557294	CTAG1A	P78358	180 aa		10.6	□□□□□ -0.71
PRKCH-223	ENST00000557294	LINC00304	Q8N9R0	145 aa		10.6	□□□□□ -0.71
PRKCH-223	ENST00000557294	BORCS7	Q96B45	105 aa		10.6	□□□□□ -0.71
PRKCH-223	ENST00000557294	PPP1R17	O96001	155 aa		10.59	□□□□□ -0.71
PRKCH-223	ENST00000557294	AMN1	Q8IY45	258 aa		10.59	□□□□□ -0.71
PRKCH-223	ENST00000557294	BCE1	O60756	84 aa		10.58	□□□□□ -0.72
PRKCH-223	ENST00000557294	C2orf82	Q6UX34	121 aa		10.58	□□□□□ -0.72
PRKCH-223	ENST00000557294	FAM231D	Q6ZW35	169 aa		10.58	□□□□□ -0.72
PRKCH-223	ENST00000557294	PACRG	Q96M98	296 aa	Predicted RBP	10.58	□□□□□ -0.72
PRKCH-223	ENST00000557294	PPDPF	Q9H3Y8	114 aa		10.58	□□□□□ -0.72
PRKCH-223	ENST00000557294		A0A1B0GUT8	65 aa		10.57	□□□□□ -0.72
PRKCH-223	ENST00000557294	SMKR1	H3BMG3	65 aa		10.57	□□□□□ -0.72
PRKCH-223	ENST00000557294	LINC00242	Q5T6M2	205 aa		10.57	□□□□□ -0.72
PRKCH-223	ENST00000557294	NRAC	Q8N912	160 aa		10.57	□□□□□ -0.72
PRKCH-223	ENST00000557294	SRSF3	P84103	164 aa	Known RBP	10.56	□□□□□ -0.72
PRKCH-223	ENST00000557294	CT83	Q5H943	113 aa		10.56	□□□□□ -0.72
PRKCH-223	ENST00000557294	ZNF727	A8MUV8	499 aa		10.55	□□□□□ -0.72
PRKCH-223	ENST00000557294	MRPS36	P82909	103 aa	Known RBP	10.55	□□□□□ -0.72
PRKCH-223	ENST00000557294	FAM229B	Q4G0N7	80 aa		10.55	□□□□□ -0.72
PRKCH-223	ENST00000557294	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.54	□□□□□ -0.72
PRKCH-223	ENST00000557294	PPP1R2P9	O14990	202 aa		10.54	□□□□□ -0.72
PRKCH-223	ENST00000557294	RPL39	P62891	51 aa	Known RBP	10.54	□□□□□ -0.72
PRKCH-223	ENST00000557294	HBB	P68871	147 aa		10.54	□□□□□ -0.72
PRKCH-223	ENST00000557294	IFITM10	A6NMD0	228 aa		10.53	□□□□□ -0.72
PRKCH-223	ENST00000557294	ASB16-AS1	Q495Z4	193 aa		10.53	□□□□□ -0.72
PRKCH-223	ENST00000557294	SPANXA1	Q9NS26	97 aa		10.53	□□□□□ -0.72
PRKCH-223	ENST00000557294	TP73-AS1	Q9UF72	201 aa		10.53	□□□□□ -0.72
PRKCH-223	ENST00000557294	HIGD1C	A8MV81	97 aa		10.52	□□□□□ -0.73
PRKCH-223	ENST00000557294	TAGLN2	P37802	199 aa	Known RBP	10.52	□□□□□ -0.73
PRKCH-223	ENST00000557294	TCTE3	Q8IZS6	198 aa		10.52	□□□□□ -0.73
PRKCH-223	ENST00000557294	TCAP	O15273	167 aa		10.51	□□□□□ -0.73
PRKCH-223	ENST00000557294	MRPL55	Q7Z7F7	128 aa	Known RBP	10.51	□□□□□ -0.73
PRKCH-223	ENST00000557294	SLC51B	Q86UW2	128 aa		10.51	□□□□□ -0.73
PRKCH-223	ENST00000557294	LINC00469	Q8N7U9	141 aa		10.51	□□□□□ -0.73
PRKCH-223	ENST00000557294	C20orf78	Q9BR46	151 aa		10.5	□□□□□ -0.73
PRKCH-223	ENST00000557294	KRTAP4-1	Q9BYQ7	146 aa		10.5	□□□□□ -0.73
PRKCH-223	ENST00000557294	XAGE1A	Q9HD64	81 aa		10.5	□□□□□ -0.73
PRKCH-223	ENST00000557294	IGKV2D-26	A0A0A0MRZ7	120 aa		10.49	□□□□□ -0.73
PRKCH-223	ENST00000557294	RPL32	P62910	135 aa	Known RBP	10.49	□□□□□ -0.73
PRKCH-223	ENST00000557294	LINC00337	Q8N6G1	96 aa		10.49	□□□□□ -0.73
PRKCH-223	ENST00000557294	TRBV24-1	A0A075B6N3	115 aa		10.48	□□□□□ -0.73
PRKCH-223	ENST00000557294	LINC01561	Q8N1V8	128 aa		10.48	□□□□□ -0.73
PRKCH-223	ENST00000557294	KRTAP13-1	Q8IUC0	172 aa		10.47	□□□□□ -0.73
PRKCH-223	ENST00000557294	LINC00862	A6NCI5	91 aa		10.46	□□□□□ -0.73
PRKCH-223	ENST00000557294	RIG	Q13278	110 aa		10.46	□□□□□ -0.73
PRKCH-223	ENST00000557294	LINC00167	Q96N53	147 aa		10.46	□□□□□ -0.73
PRKCH-223	ENST00000557294	RPL37AP8	A6NKH3	93 aa		10.45	□□□□□ -0.74
PRKCH-223	ENST00000557294	CKS1B	P61024	79 aa		10.45	□□□□□ -0.74
PRKCH-223	ENST00000557294	MRPL51	Q4U2R6	128 aa	Known RBP	10.45	□□□□□ -0.74
PRKCH-223	ENST00000557294	FP248	Q71RG6	208 aa	Predicted RBP	10.45	□□□□□ -0.74
PRKCH-223	ENST00000557294	FAM104B	Q5XKR9	115 aa		10.44	□□□□□ -0.74
PRKCH-223	ENST00000557294	TMEM250	H0YL14	139 aa		10.43	□□□□□ -0.74
PRKCH-223	ENST00000557294	PRSS2	P07478	247 aa		10.43	□□□□□ -0.74
PRKCH-223	ENST00000557294	KRTAP13-3	Q3SY46	172 aa		10.43	□□□□□ -0.74
PRKCH-223	ENST00000557294	C6orf226	Q5I0X4	101 aa		10.43	□□□□□ -0.74
PRKCH-223	ENST00000557294	UBE2A	P49459	152 aa		10.42	□□□□□ -0.74
PRKCH-223	ENST00000557294	SEC61B	P60468	96 aa	Known RBP	10.42	□□□□□ -0.74
PRKCH-223	ENST00000557294	TNFRSF6B	O95407	300 aa		10.41	□□□□□ -0.74
PRKCH-223	ENST00000557294	CKS2	P33552	79 aa		10.41	□□□□□ -0.74
PRKCH-223	ENST00000557294	IFI27	P40305	119 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKCH-223	ENST00000557294		Q6ZN92	141 aa		10.41	□□□□□ -0.74
PRKCH-223	ENST00000557294	SMIM2	Q9BVW6	85 aa		10.41	□□□□□ -0.74
PRKCH-223	ENST00000557294	OSTC	Q9NRP0	149 aa		10.41	□□□□□ -0.74
PRKCH-223	ENST00000557294	PYGO1	Q9Y3Y4	419 aa		10.41	□□□□□ -0.74
PRKCH-223	ENST00000557294	BLOC1S1	P78537	153 aa		10.4	□□□□□ -0.74
PRKCH-223	ENST00000557294	SPAG11A	Q6PDA7	123 aa		10.4	□□□□□ -0.74
PRKCH-223	ENST00000557294	AKAP14	Q86UN6	197 aa		10.4	□□□□□ -0.74
PRKCH-223	ENST00000557294	TOMM7	Q9P0U1	55 aa		10.4	□□□□□ -0.74
PRKCH-223	ENST00000557294	IGLV4-3	A0A075B6K6	122 aa		10.39	□□□□□ -0.75
PRKCH-223	ENST00000557294	LCE2C	Q5TA81	110 aa		10.39	□□□□□ -0.75
PRKCH-223	ENST00000557294		Q8IZM0	81 aa		10.39	□□□□□ -0.75
PRKCH-223	ENST00000557294	LINC01551	Q86U37	167 aa		10.38	□□□□□ -0.75
PRKCH-223	ENST00000557294	GAGE10	A6NGK3	116 aa		10.37	□□□□□ -0.75
PRKCH-223	ENST00000557294	ALKAL2	Q6UX46	152 aa		10.37	□□□□□ -0.75
PRKCH-223	ENST00000557294	TMEM141	Q96I45	108 aa		10.37	□□□□□ -0.75
PRKCH-223	ENST00000557294	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.37	□□□□□ -0.75
PRKCH-223	ENST00000557294		F8VRH5	84 aa		10.36	□□□□□ -0.75
PRKCH-223	ENST00000557294	PNRC1	Q12796	327 aa	Predicted RBP	10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms