RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 RPL18AQ02543 176 aaKnown RBP9.79□□□□□ -0.84
TUBB3-213ENST00000557262 SPAG11BQ08648 103 aa9.79□□□□□ -0.84
TUBB3-213ENST00000557262 FAM104AQ969W3 186 aa9.79□□□□□ -0.84
TUBB3-213ENST00000557262 SMIM2Q9BVW6 85 aa9.79□□□□□ -0.84
TUBB3-213ENST00000557262 SMDT1Q9H4I9 107 aa9.79□□□□□ -0.84
TUBB3-213ENST00000557262 SPANXA1Q9NS26 97 aa9.79□□□□□ -0.84
TUBB3-213ENST00000557262 IGHV3OR16-9A0A0B4J2B5 98 aa9.78□□□□□ -0.84
TUBB3-213ENST00000557262 D6R8Y8 96 aa9.78□□□□□ -0.84
TUBB3-213ENST00000557262 F8W036 122 aa9.78□□□□□ -0.84
TUBB3-213ENST00000557262 MRPS36P82909 103 aaKnown RBP9.78□□□□□ -0.84
TUBB3-213ENST00000557262 PPBPP02775 128 aa9.77□□□□□ -0.85
TUBB3-213ENST00000557262 MT-ND6P03923 174 aa9.77□□□□□ -0.85
TUBB3-213ENST00000557262 HBBP68871 147 aa9.77□□□□□ -0.85
TUBB3-213ENST00000557262 MRPL54Q6P161 138 aaKnown RBP9.77□□□□□ -0.85
TUBB3-213ENST00000557262 ORAOV1Q8WV07 137 aa9.77□□□□□ -0.85
TUBB3-213ENST00000557262 IMMP2LQ96T52 175 aa9.77□□□□□ -0.85
TUBB3-213ENST00000557262 MRPL35Q9NZE8 188 aaKnown RBP9.77□□□□□ -0.85
TUBB3-213ENST00000557262 PSORS1C2Q9UIG4 136 aa9.77□□□□□ -0.85
TUBB3-213ENST00000557262 NPYP01303 97 aa9.76□□□□□ -0.85
TUBB3-213ENST00000557262 A0A1B0GXF2 115 aa9.75□□□□□ -0.85
TUBB3-213ENST00000557262 PHF5AQ7RTV0 110 aaKnown RBP9.75□□□□□ -0.85
TUBB3-213ENST00000557262 NDUFA1O15239 70 aa9.74□□□□□ -0.85
TUBB3-213ENST00000557262 C1orf137Q5JT78 98 aa9.74□□□□□ -0.85
TUBB3-213ENST00000557262 RNF213Q63HN8 5207 aa9.74□□□□□ -0.85
TUBB3-213ENST00000557262 A0A1B0GVG6 124 aa9.73□□□□□ -0.85
TUBB3-213ENST00000557262 IFITM10A6NMD0 228 aa9.73□□□□□ -0.85
TUBB3-213ENST00000557262 RAB5AP20339 215 aa9.73□□□□□ -0.85
TUBB3-213ENST00000557262 C10orf25Q5T742 122 aa9.73□□□□□ -0.85
TUBB3-213ENST00000557262 UNQ6190/PRO20217Q6UXQ8 127 aa9.73□□□□□ -0.85
TUBB3-213ENST00000557262 TMEM136Q6ZRR5 245 aa9.73□□□□□ -0.85
TUBB3-213ENST00000557262 TLX1NBP0CAT3 122 aa9.72□□□□□ -0.85
TUBB3-213ENST00000557262 ORMDL3Q8N138 153 aa9.72□□□□□ -0.85
TUBB3-213ENST00000557262 TGIF2-C20orf24A0A0A6YYL0 155 aa9.71□□□□□ -0.86
TUBB3-213ENST00000557262 IFI27P40305 119 aaPredicted RBP9.71□□□□□ -0.86
TUBB3-213ENST00000557262 ATP5L2Q7Z4Y8 100 aa9.71□□□□□ -0.86
TUBB3-213ENST00000557262 PRELID3AQ96N28 172 aa9.71□□□□□ -0.86
TUBB3-213ENST00000557262 PYGO1Q9Y3Y4 419 aa9.71□□□□□ -0.86
TUBB3-213ENST00000557262 A0A087WZ39 114 aa9.7□□□□□ -0.86
TUBB3-213ENST00000557262 C6orf48Q9UBA6 75 aa9.7□□□□□ -0.86
TUBB3-213ENST00000557262 FAM168BA1KXE4 195 aa9.69□□□□□ -0.86
TUBB3-213ENST00000557262 PRSS47A8MTI9 375 aa9.69□□□□□ -0.86
TUBB3-213ENST00000557262 IGLV7-43P04211 117 aa9.69□□□□□ -0.86
TUBB3-213ENST00000557262 KIAA0087Q14695 138 aa9.69□□□□□ -0.86
TUBB3-213ENST00000557262 LINC00242Q5T6M2 205 aa9.69□□□□□ -0.86
TUBB3-213ENST00000557262 IGLV4-3A0A075B6K6 122 aa9.68□□□□□ -0.86
TUBB3-213ENST00000557262 GAGE2EQ4V326 116 aa9.68□□□□□ -0.86
TUBB3-213ENST00000557262 DIRC1Q969H9 104 aa9.68□□□□□ -0.86
TUBB3-213ENST00000557262 TMEM141Q96I45 108 aa9.68□□□□□ -0.86
TUBB3-213ENST00000557262 GAGE2DQ9UEU5 116 aa9.68□□□□□ -0.86
TUBB3-213ENST00000557262 LAMTOR2Q9Y2Q5 125 aa9.67□□□□□ -0.86
TUBB3-213ENST00000557262 TRBV30A0A0K0K1B3 111 aa9.66□□□□□ -0.86
TUBB3-213ENST00000557262 LOC389332A0A1B0GUA5 103 aa9.66□□□□□ -0.86
TUBB3-213ENST00000557262 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
TUBB3-213ENST00000557262 FAM19A5Q7Z5A7 132 aaPredicted RBP9.66□□□□□ -0.86
TUBB3-213ENST00000557262 KRTAP11-1Q8IUC1 163 aa9.66□□□□□ -0.86
TUBB3-213ENST00000557262 LINC01561Q8N1V8 128 aa9.65□□□□□ -0.86
TUBB3-213ENST00000557262 MAP1LC3AQ9H492 121 aa9.65□□□□□ -0.86
TUBB3-213ENST00000557262 UBE2D1P51668 147 aa9.64□□□□□ -0.87
TUBB3-213ENST00000557262 C2orf82Q6UX34 121 aa9.64□□□□□ -0.87
TUBB3-213ENST00000557262 KRTAP7-1Q8IUC3 87 aa9.64□□□□□ -0.87
TUBB3-213ENST00000557262 PACRGQ96M98 296 aaPredicted RBP9.64□□□□□ -0.87
TUBB3-213ENST00000557262 NDUFC2-KCTD14E9PQ53 114 aa9.63□□□□□ -0.87
TUBB3-213ENST00000557262 H0Y9J4 135 aa9.63□□□□□ -0.87
TUBB3-213ENST00000557262 C2orf66Q6UXQ4 117 aa9.63□□□□□ -0.87
TUBB3-213ENST00000557262 Q8N8P6 123 aa9.63□□□□□ -0.87
TUBB3-213ENST00000557262 PRR26Q8N8Z3 221 aa9.63□□□□□ -0.87
TUBB3-213ENST00000557262 ANAPC16Q96DE5 110 aa9.63□□□□□ -0.87
TUBB3-213ENST00000557262 C2orf88Q9BSF0 95 aa9.63□□□□□ -0.87
TUBB3-213ENST00000557262 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
TUBB3-213ENST00000557262 PNRC1Q12796 327 aaPredicted RBP9.62□□□□□ -0.87
TUBB3-213ENST00000557262 Q6ZN92 141 aa9.62□□□□□ -0.87
TUBB3-213ENST00000557262 AMELXQ99217 191 aa9.62□□□□□ -0.87
TUBB3-213ENST00000557262 VCX2Q9H322 139 aa9.62□□□□□ -0.87
TUBB3-213ENST00000557262 M0QXV9 152 aa9.61□□□□□ -0.87
TUBB3-213ENST00000557262 MT-ND4LP03901 98 aa9.61□□□□□ -0.87
TUBB3-213ENST00000557262 UBE2BP63146 152 aa9.61□□□□□ -0.87
TUBB3-213ENST00000557262 ORMDL2Q53FV1 153 aa9.61□□□□□ -0.87
TUBB3-213ENST00000557262 ZC2HC1BQ5TFG8 222 aa9.61□□□□□ -0.87
TUBB3-213ENST00000557262 K7EMI3 77 aa9.6□□□□□ -0.87
TUBB3-213ENST00000557262 NPSP0C0P6 89 aa9.6□□□□□ -0.87
TUBB3-213ENST00000557262 C9orf129Q5T035 196 aaKnown RBP9.6□□□□□ -0.87
TUBB3-213ENST00000557262 LINC00173Q6ZV60 143 aa9.6□□□□□ -0.87
TUBB3-213ENST00000557262 PRSS2P07478 247 aa9.59□□□□□ -0.87
TUBB3-213ENST00000557262 C6orf226Q5I0X4 101 aa9.59□□□□□ -0.87
TUBB3-213ENST00000557262 FAM19A3Q7Z5A8 133 aa9.59□□□□□ -0.87
TUBB3-213ENST00000557262 IGLV1-50A0A075B6I6 118 aa9.58□□□□□ -0.88
TUBB3-213ENST00000557262 IGIPA6NJ69 53 aa9.58□□□□□ -0.88
TUBB3-213ENST00000557262 CKS1BP61024 79 aa9.58□□□□□ -0.88
TUBB3-213ENST00000557262 TOMM7Q9P0U1 55 aa9.58□□□□□ -0.88
TUBB3-213ENST00000557262 KRTAP1-4P0C5Y4 121 aa9.57□□□□□ -0.88
TUBB3-213ENST00000557262 Q8IZM0 81 aa9.57□□□□□ -0.88
TUBB3-213ENST00000557262 NXT2Q9NPJ8 142 aaKnown RBP9.57□□□□□ -0.88
TUBB3-213ENST00000557262 G0S2P27469 103 aa9.56□□□□□ -0.88
TUBB3-213ENST00000557262 SEC11AP67812 179 aa9.56□□□□□ -0.88
TUBB3-213ENST00000557262 PAPPA-AS1Q5QFB9 102 aa9.56□□□□□ -0.88
TUBB3-213ENST00000557262 ALKBH7Q9BT30 221 aaPredicted RBP9.56□□□□□ -0.88
TUBB3-213ENST00000557262 LPAP08519 4548 aa9.56□□□□□ -0.88
TUBB3-213ENST00000557262 RAB14P61106 215 aa9.55□□□□□ -0.88
TUBB3-213ENST00000557262 HERVK_113P63121 156 aa9.55□□□□□ -0.88
TUBB3-213ENST00000557262 CTDSP1Q9GZU7 261 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms