RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 DAND5Q8N907 189 aa6.9□□□□□ -1.3
PSEN1-220ENST00000557037 PACRGQ96M98 296 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-220ENST00000557037 MRPL18Q9H0U6 180 aaKnown RBP6.9□□□□□ -1.3
PSEN1-220ENST00000557037 XAGE1AQ9HD64 81 aa6.9□□□□□ -1.3
PSEN1-220ENST00000557037 PCOTHQ58A44 107 aa6.89□□□□□ -1.31
PSEN1-220ENST00000557037 IGHV3OR16-9A0A0B4J2B5 98 aa6.88□□□□□ -1.31
PSEN1-220ENST00000557037 TRBV30A0A0K0K1B3 111 aa6.88□□□□□ -1.31
PSEN1-220ENST00000557037 GAGE10A6NGK3 116 aa6.88□□□□□ -1.31
PSEN1-220ENST00000557037 KIAA0087Q14695 138 aa6.88□□□□□ -1.31
PSEN1-220ENST00000557037 TMUB2Q71RG4 321 aa6.88□□□□□ -1.31
PSEN1-220ENST00000557037 TRBV6-5A0A0K0K1A5 114 aa6.87□□□□□ -1.31
PSEN1-220ENST00000557037 SSNA1O43805 119 aa6.87□□□□□ -1.31
PSEN1-220ENST00000557037 RPL35P42766 123 aaKnown RBP6.87□□□□□ -1.31
PSEN1-220ENST00000557037 AKR1C8PQ5T2L2 129 aa6.87□□□□□ -1.31
PSEN1-220ENST00000557037 RPL7L1Q6DKI1 246 aaKnown RBP6.87□□□□□ -1.31
PSEN1-220ENST00000557037 C9orf62Q8N4C0 152 aa6.87□□□□□ -1.31
PSEN1-220ENST00000557037 LINC00167Q96N53 147 aa6.87□□□□□ -1.31
PSEN1-220ENST00000557037 ST20Q9HBF5 79 aa6.87□□□□□ -1.31
PSEN1-220ENST00000557037 XKRY2A2RUG3 117 aa6.86□□□□□ -1.31
PSEN1-220ENST00000557037 UPK1BO75841 260 aa6.86□□□□□ -1.31
PSEN1-220ENST00000557037 TEX261Q6UWH6 196 aa6.86□□□□□ -1.31
PSEN1-220ENST00000557037 COX6B2Q6YFQ2 88 aa6.86□□□□□ -1.31
PSEN1-220ENST00000557037 A0A1B0GV50 99 aa6.85□□□□□ -1.31
PSEN1-220ENST00000557037 ZNF727A8MUV8 499 aa6.85□□□□□ -1.31
PSEN1-220ENST00000557037 TNFRSF6BO95407 300 aa6.85□□□□□ -1.31
PSEN1-220ENST00000557037 TP73-AS1Q9UF72 201 aa6.85□□□□□ -1.31
PSEN1-220ENST00000557037 CSDC2Q9Y534 153 aaKnown RBP6.85□□□□□ -1.31
PSEN1-220ENST00000557037 PFDN1O60925 122 aa6.84□□□□□ -1.31
PSEN1-220ENST00000557037 CENPWQ5EE01 88 aa6.84□□□□□ -1.31
PSEN1-220ENST00000557037 SMIM15Q7Z3B0 74 aa6.84□□□□□ -1.31
PSEN1-220ENST00000557037 KIR2DL4Q99706 377 aa6.84□□□□□ -1.31
PSEN1-220ENST00000557037 FCER1GP30273 86 aa6.83□□□□□ -1.32
PSEN1-220ENST00000557037 POLR2KP53803 58 aaKnown RBP6.83□□□□□ -1.32
PSEN1-220ENST00000557037 PRLHP81277 87 aa6.83□□□□□ -1.32
PSEN1-220ENST00000557037 CNFNQ9BYD5 112 aa6.83□□□□□ -1.32
PSEN1-220ENST00000557037 NDUFA12Q9UI09 145 aa6.83□□□□□ -1.32
PSEN1-220ENST00000557037 NEBP20929 6669 aa6.83□□□□□ -1.32
PSEN1-220ENST00000557037 SMAGPQ0VAQ4 97 aa6.82□□□□□ -1.32
PSEN1-220ENST00000557037 Q8NBF4 154 aa6.82□□□□□ -1.32
PSEN1-220ENST00000557037 ENKURQ8TC29 256 aa6.82□□□□□ -1.32
PSEN1-220ENST00000557037 BORCS7-ASMTA0A0B4J1R7 106 aa6.81□□□□□ -1.32
PSEN1-220ENST00000557037 TRBV27A0A0K0K1C4 114 aa6.81□□□□□ -1.32
PSEN1-220ENST00000557037 RAB19A4D1S5 217 aa6.8□□□□□ -1.32
PSEN1-220ENST00000557037 RPL32P62910 135 aaKnown RBP6.8□□□□□ -1.32
PSEN1-220ENST00000557037 PNRC1Q12796 327 aaPredicted RBP6.8□□□□□ -1.32
PSEN1-220ENST00000557037 FAM210AQ96ND0 272 aa6.8□□□□□ -1.32
PSEN1-220ENST00000557037 TGIF2-C20orf24A0A0A6YYL0 155 aa6.79□□□□□ -1.32
PSEN1-220ENST00000557037 FAM104AQ969W3 186 aa6.79□□□□□ -1.32
PSEN1-220ENST00000557037 PLEKHB2Q96CS7 222 aa6.79□□□□□ -1.32
PSEN1-220ENST00000557037 IFITM10A6NMD0 228 aa6.78□□□□□ -1.32
PSEN1-220ENST00000557037 SFT2D1Q8WV19 159 aa6.78□□□□□ -1.32
PSEN1-220ENST00000557037 TIMM21Q9BVV7 248 aa6.78□□□□□ -1.32
PSEN1-220ENST00000557037 VCYO14598 125 aa6.77□□□□□ -1.33
PSEN1-220ENST00000557037 SPINK1P00995 79 aa6.77□□□□□ -1.33
PSEN1-220ENST00000557037 GNG4P50150 75 aa6.77□□□□□ -1.33
PSEN1-220ENST00000557037 FAM19A1Q7Z5A9 133 aa6.77□□□□□ -1.33
PSEN1-220ENST00000557037 KCNRGQ8N5I3 272 aa6.77□□□□□ -1.33
PSEN1-220ENST00000557037 NUDT10Q8NFP7 164 aa6.77□□□□□ -1.33
PSEN1-220ENST00000557037 NUDT11Q96G61 164 aa6.77□□□□□ -1.33
PSEN1-220ENST00000557037 IGKV2-28A0A075B6P5 120 aa6.76□□□□□ -1.33
PSEN1-220ENST00000557037 SCO1O75880 301 aa6.76□□□□□ -1.33
PSEN1-220ENST00000557037 IGKV2D-28P01615 120 aa6.76□□□□□ -1.33
PSEN1-220ENST00000557037 CFC1P0CG37 223 aa6.76□□□□□ -1.33
PSEN1-220ENST00000557037 RPL39P62891 51 aaKnown RBP6.76□□□□□ -1.33
PSEN1-220ENST00000557037 SMKR1H3BMG3 65 aa6.75□□□□□ -1.33
PSEN1-220ENST00000557037 CKS1BP61024 79 aa6.75□□□□□ -1.33
PSEN1-220ENST00000557037 HBBP68871 147 aa6.75□□□□□ -1.33
PSEN1-220ENST00000557037 Q8N377 158 aa6.75□□□□□ -1.33
PSEN1-220ENST00000557037 TOMM7Q9P0U1 55 aa6.75□□□□□ -1.33
PSEN1-220ENST00000557037 Q5BKY6 102 aa6.74□□□□□ -1.33
PSEN1-220ENST00000557037 C11orf52Q96A22 123 aa6.74□□□□□ -1.33
PSEN1-220ENST00000557037 TMEM18Q96B42 140 aa6.74□□□□□ -1.33
PSEN1-220ENST00000557037 TMEM238C9JI98 176 aa6.73□□□□□ -1.33
PSEN1-220ENST00000557037 PRSS2P07478 247 aa6.73□□□□□ -1.33
PSEN1-220ENST00000557037 KRTAP6-3Q3LI67 103 aa6.73□□□□□ -1.33
PSEN1-220ENST00000557037 CBLN2Q8IUK8 224 aa6.73□□□□□ -1.33
PSEN1-220ENST00000557037 FAM19A2Q8N3H0 131 aa6.73□□□□□ -1.33
PSEN1-220ENST00000557037 FAM213BQ8TBF2 198 aa6.73□□□□□ -1.33
PSEN1-220ENST00000557037 TRBV20OR9-2A0A075B6H5 130 aa6.72□□□□□ -1.33
PSEN1-220ENST00000557037 NKAPP1Q8N9T2 125 aa6.72□□□□□ -1.33
PSEN1-220ENST00000557037 MBD3L1Q8WWY6 194 aa6.72□□□□□ -1.33
PSEN1-220ENST00000557037 SPRR4Q96PI1 79 aa6.72□□□□□ -1.33
PSEN1-220ENST00000557037 HIGD2AQ9BW72 106 aa6.72□□□□□ -1.33
PSEN1-220ENST00000557037 SLC25A20O43772 301 aa6.71□□□□□ -1.34
PSEN1-220ENST00000557037 CCL20P78556 96 aa6.71□□□□□ -1.34
PSEN1-220ENST00000557037 C6orf226Q5I0X4 101 aa6.71□□□□□ -1.34
PSEN1-220ENST00000557037 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.34
PSEN1-220ENST00000557037 RAB4AP20338 218 aa6.7□□□□□ -1.34
PSEN1-220ENST00000557037 SUMO2P61956 95 aaKnown RBP6.7□□□□□ -1.34
PSEN1-220ENST00000557037 SMIM12Q96EX1 92 aa6.7□□□□□ -1.34
PSEN1-220ENST00000557037 TMEM126AQ9H061 195 aa6.7□□□□□ -1.34
PSEN1-220ENST00000557037 BIN3Q9NQY0 253 aa6.7□□□□□ -1.34
PSEN1-220ENST00000557037 IGLV5-37A0A075B6J1 123 aa6.69□□□□□ -1.34
PSEN1-220ENST00000557037 C9orf92A6NGG3 77 aa6.69□□□□□ -1.34
PSEN1-220ENST00000557037 MRPS36P82909 103 aaKnown RBP6.69□□□□□ -1.34
PSEN1-220ENST00000557037 AMN1Q8IY45 258 aa6.69□□□□□ -1.34
PSEN1-220ENST00000557037 SPANXA1Q9NS26 97 aa6.69□□□□□ -1.34
PSEN1-220ENST00000557037 GNG13Q9P2W3 67 aa6.69□□□□□ -1.34
PSEN1-220ENST00000557037 FXYD6-FXYD2A0A087WZ82 144 aa6.68□□□□□ -1.34
PSEN1-220ENST00000557037 NRACQ8N912 160 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms