RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 HIST1H2BDP58876 126 aa6.05□□□□□ -1.44
SYNE2-224ENST00000557024 HIST1H2BCP62807 126 aa6.05□□□□□ -1.44
SYNE2-224ENST00000557024 SMAGPQ0VAQ4 97 aa6.05□□□□□ -1.44
SYNE2-224ENST00000557024 Q0VG73 95 aa6.05□□□□□ -1.44
SYNE2-224ENST00000557024 HIST2H2BEQ16778 126 aa6.05□□□□□ -1.44
SYNE2-224ENST00000557024 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.05□□□□□ -1.44
SYNE2-224ENST00000557024 LELP1Q5T871 98 aa6.05□□□□□ -1.44
SYNE2-224ENST00000557024 HIST1H2BHQ93079 126 aa6.05□□□□□ -1.44
SYNE2-224ENST00000557024 HIST1H2BNQ99877 126 aa6.05□□□□□ -1.44
SYNE2-224ENST00000557024 HIST1H2BMQ99879 126 aa6.05□□□□□ -1.44
SYNE2-224ENST00000557024 CHCHD5Q9BSY4 110 aa6.05□□□□□ -1.44
SYNE2-224ENST00000557024 TMEM243Q9BU79 118 aa6.05□□□□□ -1.44
SYNE2-224ENST00000557024 TRAV8-3A0A0A6YYJ7 113 aa6.04□□□□□ -1.44
SYNE2-224ENST00000557024 TMEM262E9PQX1 116 aa6.04□□□□□ -1.44
SYNE2-224ENST00000557024 PKIAP61925 76 aa6.04□□□□□ -1.44
SYNE2-224ENST00000557024 AMMECR1LQ6DCA0 310 aa6.04□□□□□ -1.44
SYNE2-224ENST00000557024 CHCHD1Q96BP2 118 aaKnown RBP6.04□□□□□ -1.44
SYNE2-224ENST00000557024 TSHBP01222 138 aa6.03□□□□□ -1.44
SYNE2-224ENST00000557024 GAGE6Q13070 117 aa6.03□□□□□ -1.44
SYNE2-224ENST00000557024 DGAT2L7PQ6IED9 249 aa6.03□□□□□ -1.44
SYNE2-224ENST00000557024 NTM-AS1Q6ZSK4 140 aa6.03□□□□□ -1.44
SYNE2-224ENST00000557024 Q8N976 141 aa6.03□□□□□ -1.44
SYNE2-224ENST00000557024 TNXBP22105 4242 aa6.03□□□□□ -1.44
SYNE2-224ENST00000557024 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.02□□□□□ -1.45
SYNE2-224ENST00000557024 A0A087WX48 190 aa6.02□□□□□ -1.45
SYNE2-224ENST00000557024 IGKV2-29A2NJV5 120 aaPredicted RBP6.02□□□□□ -1.45
SYNE2-224ENST00000557024 GAGE12HA6NDE8 117 aa6.02□□□□□ -1.45
SYNE2-224ENST00000557024 LINC01549A6NIU2 74 aa6.02□□□□□ -1.45
SYNE2-224ENST00000557024 H7C423 109 aa6.02□□□□□ -1.45
SYNE2-224ENST00000557024 SERF1AO75920 110 aa6.02□□□□□ -1.45
SYNE2-224ENST00000557024 C2orf66Q6UXQ4 117 aa6.02□□□□□ -1.45
SYNE2-224ENST00000557024 Q6ZRU5 148 aa6.02□□□□□ -1.45
SYNE2-224ENST00000557024 TMEM101Q96IK0 257 aa6.02□□□□□ -1.45
SYNE2-224ENST00000557024 CHCHD7Q9BUK0 85 aa6.02□□□□□ -1.45
SYNE2-224ENST00000557024 CYSLTR1Q9Y271 337 aa6.02□□□□□ -1.45
SYNE2-224ENST00000557024 HBDP02042 147 aa6.01□□□□□ -1.45
SYNE2-224ENST00000557024 ESDP10768 282 aa6.01□□□□□ -1.45
SYNE2-224ENST00000557024 C20orf203Q8NBC4 194 aa6.01□□□□□ -1.45
SYNE2-224ENST00000557024 IGKV2D-24A0A075B6R9 120 aa6□□□□□ -1.45
SYNE2-224ENST00000557024 LINC01546A6NGU7 62 aa6□□□□□ -1.45
SYNE2-224ENST00000557024 FGF6P10767 208 aa6□□□□□ -1.45
SYNE2-224ENST00000557024 S100A2P29034 98 aa6□□□□□ -1.45
SYNE2-224ENST00000557024 PMCHL1Q16048 86 aa6□□□□□ -1.45
SYNE2-224ENST00000557024 URB1-AS1Q96HZ7 61 aa6□□□□□ -1.45
SYNE2-224ENST00000557024 SCGB3A1Q96QR1 104 aa6□□□□□ -1.45
SYNE2-224ENST00000557024 COX11Q9Y6N1 276 aa6□□□□□ -1.45
SYNE2-224ENST00000557024 ANGP03950 147 aaKnown RBP5.99□□□□□ -1.45
SYNE2-224ENST00000557024 ZNF25P17030 456 aaPredicted RBP5.99□□□□□ -1.45
SYNE2-224ENST00000557024 RPL39P62891 51 aaKnown RBP5.99□□□□□ -1.45
SYNE2-224ENST00000557024 FAM19A2Q8N3H0 131 aa5.99□□□□□ -1.45
SYNE2-224ENST00000557024 OR5A1Q8NGJ0 315 aa5.99□□□□□ -1.45
SYNE2-224ENST00000557024 TOMM6Q96B49 74 aa5.99□□□□□ -1.45
SYNE2-224ENST00000557024 RMI2Q96E14 147 aa5.99□□□□□ -1.45
SYNE2-224ENST00000557024 KRTAP9-7A8MTY7 169 aa5.98□□□□□ -1.45
SYNE2-224ENST00000557024 NUPR1O60356 82 aa5.98□□□□□ -1.45
SYNE2-224ENST00000557024 LEPROTL1O95214 131 aa5.98□□□□□ -1.45
SYNE2-224ENST00000557024 PDZD11Q5EBL8 140 aa5.98□□□□□ -1.45
SYNE2-224ENST00000557024 COA6Q5JTJ3 125 aaKnown RBP5.98□□□□□ -1.45
SYNE2-224ENST00000557024 PAPPA-AS1Q5QFB9 102 aa5.98□□□□□ -1.45
SYNE2-224ENST00000557024 Q6ZN92 141 aa5.98□□□□□ -1.45
SYNE2-224ENST00000557024 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
SYNE2-224ENST00000557024 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
SYNE2-224ENST00000557024 SPANXA1Q9NS26 97 aa5.98□□□□□ -1.45
SYNE2-224ENST00000557024 UBE2D4Q9Y2X8 147 aa5.98□□□□□ -1.45
SYNE2-224ENST00000557024 IGKV3OR2-268A0A0C4DH90 116 aa5.97□□□□□ -1.45
SYNE2-224ENST00000557024 A0A1B0GUV1 79 aa5.97□□□□□ -1.45
SYNE2-224ENST00000557024 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.97□□□□□ -1.45
SYNE2-224ENST00000557024 ATP5LO75964 103 aa5.97□□□□□ -1.45
SYNE2-224ENST00000557024 CRPP02741 224 aa5.97□□□□□ -1.45
SYNE2-224ENST00000557024 FABP4P15090 132 aa5.97□□□□□ -1.45
SYNE2-224ENST00000557024 SNRPEP62304 92 aaKnown RBP5.97□□□□□ -1.45
SYNE2-224ENST00000557024 RBX1P62877 108 aa5.97□□□□□ -1.45
SYNE2-224ENST00000557024 MPV17L2Q567V2 206 aa5.97□□□□□ -1.45
SYNE2-224ENST00000557024 ERASQ7Z444 233 aa5.97□□□□□ -1.45
SYNE2-224ENST00000557024 TMEM141Q96I45 108 aa5.97□□□□□ -1.45
SYNE2-224ENST00000557024 TIMM21Q9BVV7 248 aa5.97□□□□□ -1.45
SYNE2-224ENST00000557024 HSPB8Q9UJY1 196 aa5.97□□□□□ -1.45
SYNE2-224ENST00000557024 PANO1I0J062 215 aa5.96□□□□□ -1.46
SYNE2-224ENST00000557024 PRSS1P07477 247 aa5.96□□□□□ -1.46
SYNE2-224ENST00000557024 TEX43Q6ZNM6 134 aa5.96□□□□□ -1.46
SYNE2-224ENST00000557024 MRPL52Q86TS9 123 aaKnown RBP5.96□□□□□ -1.46
SYNE2-224ENST00000557024 IFI27L1Q96BM0 104 aa5.96□□□□□ -1.46
SYNE2-224ENST00000557024 TIMM17AQ99595 171 aa5.96□□□□□ -1.46
SYNE2-224ENST00000557024 C2orf88Q9BSF0 95 aa5.96□□□□□ -1.46
SYNE2-224ENST00000557024 VCX2Q9H322 139 aa5.96□□□□□ -1.46
SYNE2-224ENST00000557024 KLK12Q9UKR0 248 aa5.96□□□□□ -1.46
SYNE2-224ENST00000557024 PYGO1Q9Y3Y4 419 aa5.96□□□□□ -1.46
SYNE2-224ENST00000557024 CSDC2Q9Y534 153 aaKnown RBP5.96□□□□□ -1.46
SYNE2-224ENST00000557024 IGLV4-60A0A075B6I1 120 aa5.95□□□□□ -1.46
SYNE2-224ENST00000557024 A0A096LNJ9 63 aa5.95□□□□□ -1.46
SYNE2-224ENST00000557024 H0Y8G0 127 aa5.95□□□□□ -1.46
SYNE2-224ENST00000557024 NPSP0C0P6 89 aa5.95□□□□□ -1.46
SYNE2-224ENST00000557024 MRPS36P82909 103 aaKnown RBP5.95□□□□□ -1.46
SYNE2-224ENST00000557024 RNASE13Q5GAN3 156 aaKnown RBP5.95□□□□□ -1.46
SYNE2-224ENST00000557024 ZNF664Q8N3J9 261 aa5.95□□□□□ -1.46
SYNE2-224ENST00000557024 UBE2WQ96B02 151 aa5.95□□□□□ -1.46
SYNE2-224ENST00000557024 IGLV4-3A0A075B6K6 122 aa5.94□□□□□ -1.46
SYNE2-224ENST00000557024 SS18Q15532 418 aa5.94□□□□□ -1.46
SYNE2-224ENST00000557024 C14orf177Q52M58 125 aa5.94□□□□□ -1.46
SYNE2-224ENST00000557024 CLPSL2Q6UWE3 100 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms